RNA–Protein interactions for RNA: ENST00000538144.5

PXN-208, Transcript of paxillin, humanhuman

TSL 1 (best)

Gene PXN, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-208ENST00000538144 ESCO1Q5FWF5 840 aa20.32■□□□□ 0.84
PXN-208ENST00000538144 ZRANB1Q9UGI0 708 aa20.32■□□□□ 0.84
PXN-208ENST00000538144 PHF8Q9UPP1 1060 aa20.32■□□□□ 0.84
PXN-208ENST00000538144 TTC21BQ7Z4L5 1316 aa20.32■□□□□ 0.84
PXN-208ENST00000538144 HNRNPUQ00839 825 aaKnown RBP eCLIP20.31■□□□□ 0.84
PXN-208ENST00000538144 NCOA3Q9Y6Q9 1424 aa20.31■□□□□ 0.84
PXN-208ENST00000538144 ATF3P18847 181 aa20.3■□□□□ 0.84
PXN-208ENST00000538144 MTHFSP49914 203 aa20.29■□□□□ 0.84
PXN-208ENST00000538144 ORAI2Q96SN7 254 aa20.28■□□□□ 0.84
PXN-208ENST00000538144 LRRC7Q96NW7 1537 aa20.28■□□□□ 0.84
PXN-208ENST00000538144 SSH2Q76I76 1423 aa20.28■□□□□ 0.84
PXN-208ENST00000538144 COG3Q96JB2 828 aa20.27■□□□□ 0.84
PXN-208ENST00000538144 MSH6P52701 1360 aa20.26■□□□□ 0.83
PXN-208ENST00000538144 FBLN1P23142 703 aa20.25■□□□□ 0.83
PXN-208ENST00000538144 C1orf167Q5SNV9 1468 aa20.25■□□□□ 0.83
PXN-208ENST00000538144 DCCP43146 1447 aa20.25■□□□□ 0.83
PXN-208ENST00000538144 MAP2P11137 1827 aaKnown RBP20.25■□□□□ 0.83
PXN-208ENST00000538144 TTC21AQ8NDW8 1320 aa20.24■□□□□ 0.83
PXN-208ENST00000538144 WDR43Q15061 677 aaKnown RBP eCLIP20.23■□□□□ 0.83
PXN-208ENST00000538144 CADPS2Q86UW7 1296 aa20.23■□□□□ 0.83
PXN-208ENST00000538144 MST1RQ04912 1400 aa20.23■□□□□ 0.83
PXN-208ENST00000538144 PSME1Q06323 249 aa20.23■□□□□ 0.83
PXN-208ENST00000538144 ADAMTS8Q9UP79 889 aa20.23■□□□□ 0.83
PXN-208ENST00000538144 PAK3O75914 559 aaPredicted RBP20.22■□□□□ 0.83
PXN-208ENST00000538144 SENP3-EIF4A1A0A087X0R7 540 aa20.21■□□□□ 0.83
PXN-208ENST00000538144 FOXO3O43524 673 aa20.21■□□□□ 0.83
PXN-208ENST00000538144 CFAP53Q96M91 514 aa20.21■□□□□ 0.83
PXN-208ENST00000538144 PIK3C2AO00443 1686 aa20.2■□□□□ 0.82
PXN-208ENST00000538144 OVOS2A0A0J9YW53 1432 aa20.2■□□□□ 0.82
PXN-208ENST00000538144 OVOS2Q6IE36 1432 aa20.2■□□□□ 0.82
PXN-208ENST00000538144 POLKQ9UBT6 870 aa20.19■□□□□ 0.82
PXN-208ENST00000538144 KIF1AQ12756 1690 aa20.19■□□□□ 0.82
PXN-208ENST00000538144 PPM1GO15355 546 aaPredicted RBP20.18■□□□□ 0.82
PXN-208ENST00000538144 XPCQ01831 940 aaPredicted RBP20.18■□□□□ 0.82
PXN-208ENST00000538144 PELP1Q8IZL8 1130 aaKnown RBP20.18■□□□□ 0.82
PXN-208ENST00000538144 SHPRHQ149N8 1683 aa20.18■□□□□ 0.82
PXN-208ENST00000538144 NUTM2GQ5VZR2 741 aa20.18■□□□□ 0.82
PXN-208ENST00000538144 ABTB2Q8N961 1025 aa20.18■□□□□ 0.82
PXN-208ENST00000538144 AATKQ6ZMQ8 1374 aa20.17■□□□□ 0.82
PXN-208ENST00000538144 NLRP6P59044 892 aa20.16■□□□□ 0.82
PXN-208ENST00000538144 RRS1Q15050 365 aaKnown RBP20.16■□□□□ 0.82
PXN-208ENST00000538144 EMILIN1Q9Y6C2 1016 aa20.16■□□□□ 0.82
PXN-208ENST00000538144 SOX12O15370 315 aa20.16■□□□□ 0.82
PXN-208ENST00000538144 SUPT16HQ9Y5B9 1047 aaKnown RBP20.16■□□□□ 0.82
PXN-208ENST00000538144 USP31Q70CQ4 1352 aa20.15■□□□□ 0.82
PXN-208ENST00000538144 KRT28Q7Z3Y7 464 aa20.14■□□□□ 0.81
PXN-208ENST00000538144 BLMP54132 1417 aaPredicted RBP20.14■□□□□ 0.81
PXN-208ENST00000538144 MARF1Q9Y4F3 1742 aaKnown RBP20.14■□□□□ 0.81
PXN-208ENST00000538144 ZBED9Q6R2W3 1325 aa20.13■□□□□ 0.81
PXN-208ENST00000538144 INSRP06213 1382 aa20.13■□□□□ 0.81
PXN-208ENST00000538144 COL3A1P02461 1466 aaPredicted RBP20.13■□□□□ 0.81
PXN-208ENST00000538144 DDX17Q92841 729 aaKnown RBP20.13■□□□□ 0.81
PXN-208ENST00000538144 PNPLA6Q8IY17 1366 aa20.12■□□□□ 0.81
PXN-208ENST00000538144 SLAIN2Q9P270 581 aa20.11■□□□□ 0.81
PXN-208ENST00000538144 SALL2Q9Y467 1007 aaPredicted RBP20.11■□□□□ 0.81
PXN-208ENST00000538144 TRPM3Q9HCF6 1732 aaPredicted RBP20.11■□□□□ 0.81
PXN-208ENST00000538144 USP54Q70EL1 1684 aa20.11■□□□□ 0.81
PXN-208ENST00000538144 CCDC146Q8IYE0 955 aa20.11■□□□□ 0.81
PXN-208ENST00000538144 SMG6Q86US8 1419 aaKnown RBP20.1■□□□□ 0.81
PXN-208ENST00000538144 DIAPH1O60610 1272 aaKnown RBP20.1■□□□□ 0.81
PXN-208ENST00000538144 AEBP2Q6ZN18 517 aaPredicted RBP20.1■□□□□ 0.81
PXN-208ENST00000538144 LMOD2Q6P5Q4 547 aa20.09■□□□□ 0.81
PXN-208ENST00000538144 NUDCQ9Y266 331 aa20.09■□□□□ 0.81
PXN-208ENST00000538144 U2SURPO15042 1029 aaKnown RBP20.09■□□□□ 0.81
PXN-208ENST00000538144 BRINP3Q76B58 766 aa20.09■□□□□ 0.81
PXN-208ENST00000538144 LTBP4Q8N2S1 1624 aa20.08■□□□□ 0.81
PXN-208ENST00000538144 CDK12Q9NYV4 1490 aaPredicted RBP20.08■□□□□ 0.8
PXN-208ENST00000538144 U2AF1L5P0DN76 240 aaPredicted RBP20.08■□□□□ 0.8
PXN-208ENST00000538144 U2AF1Q01081 240 aaKnown RBP eCLIP20.08■□□□□ 0.8
PXN-208ENST00000538144 NPHP3Q7Z494 1330 aa20.07■□□□□ 0.8
PXN-208ENST00000538144 PEAK1Q9H792 1746 aa20.06■□□□□ 0.8
PXN-208ENST00000538144 PLEKHG5O94827 1062 aa20.06■□□□□ 0.8
PXN-208ENST00000538144 MAP3K19Q56UN5 1328 aa20.05■□□□□ 0.8
PXN-208ENST00000538144 ALS2Q96Q42 1657 aa20.03■□□□□ 0.8
PXN-208ENST00000538144 APAF1O14727 1248 aa20.03■□□□□ 0.8
PXN-208ENST00000538144 IL13P35225 146 aa20.02■□□□□ 0.8
PXN-208ENST00000538144 HSP90AB2PQ58FF8 381 aa20.02■□□□□ 0.8
PXN-208ENST00000538144 PXDNQ92626 1479 aa20.02■□□□□ 0.8
PXN-208ENST00000538144 AMPHP49418 695 aa20.02■□□□□ 0.79
PXN-208ENST00000538144 RUNDC1Q96C34 613 aa20.02■□□□□ 0.79
PXN-208ENST00000538144 LTN1O94822 1766 aa20.01■□□□□ 0.79
PXN-208ENST00000538144 SBNO1A3KN83 1393 aa20■□□□□ 0.79
PXN-208ENST00000538144 KCNH5Q8NCM2 988 aa20■□□□□ 0.79
PXN-208ENST00000538144 EIF4A2Q14240 407 aaKnown RBP19.99■□□□□ 0.79
PXN-208ENST00000538144 FLT4P35916 1363 aa19.99■□□□□ 0.79
PXN-208ENST00000538144 NFAT5O94916 1531 aa19.98■□□□□ 0.79
PXN-208ENST00000538144 GCP02774 474 aa19.98■□□□□ 0.79
PXN-208ENST00000538144 TNS3Q68CZ2 1445 aa19.98■□□□□ 0.79
PXN-208ENST00000538144 SLIT3O75094 1523 aa19.98■□□□□ 0.79
PXN-208ENST00000538144 HMOX1P09601 288 aa19.97■□□□□ 0.79
PXN-208ENST00000538144 USP19O94966 1318 aa19.97■□□□□ 0.79
PXN-208ENST00000538144 SPATA31A3Q5VYP0 1347 aa19.97■□□□□ 0.79
PXN-208ENST00000538144 ZBTB7CA1YPR0 619 aa19.97■□□□□ 0.79
PXN-208ENST00000538144 TCP11L2Q8N4U5 519 aa19.97■□□□□ 0.79
PXN-208ENST00000538144 PLEKHF1Q96S99 279 aa19.97■□□□□ 0.79
PXN-208ENST00000538144 HOXC9P31274 260 aa19.96■□□□□ 0.79
PXN-208ENST00000538144 SOS2Q07890 1332 aaPredicted RBP19.96■□□□□ 0.79
PXN-208ENST00000538144 FCHSD2O94868 740 aa19.95■□□□□ 0.78
PXN-208ENST00000538144 NEUROD2Q15784 382 aa19.95■□□□□ 0.78
PXN-208ENST00000538144 RRP7AQ9Y3A4 280 aaKnown RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms