RNA–Protein interactions for RNA: ENST00000538094.1

LINC00612-201, long intergenic non-protein coding RNA 612, humanhuman

TSL 2 BASIC

Gene LINC00612, Length 2,213 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00612-201ENST00000538094 PDE3AQ14432 1141 aa21.61■■□□□ 1.05
LINC00612-201ENST00000538094 PTPRUQ92729 1446 aa21.61■■□□□ 1.05
LINC00612-201ENST00000538094 WDR63Q8IWG1 891 aa21.6■■□□□ 1.05
LINC00612-201ENST00000538094 KNDC1Q76NI1 1749 aa21.6■■□□□ 1.05
LINC00612-201ENST00000538094 NINLQ9Y2I6 1382 aa21.59■■□□□ 1.05
LINC00612-201ENST00000538094 CPS1P31327 1500 aa21.59■■□□□ 1.05
LINC00612-201ENST00000538094 CCDC27Q2M243 656 aa21.59■■□□□ 1.05
LINC00612-201ENST00000538094 U2AF1L5P0DN76 240 aaPredicted RBP21.59■■□□□ 1.05
LINC00612-201ENST00000538094 U2AF1Q01081 240 aaKnown RBP eCLIP21.59■■□□□ 1.05
LINC00612-201ENST00000538094 GGNBP2Q9H3C7 697 aa21.58■■□□□ 1.05
LINC00612-201ENST00000538094 RARSP54136 660 aaKnown RBP21.57■■□□□ 1.04
LINC00612-201ENST00000538094 PANK1Q8TE04 598 aa21.57■■□□□ 1.04
LINC00612-201ENST00000538094 FAM135BQ49AJ0 1406 aa21.57■■□□□ 1.04
LINC00612-201ENST00000538094 ZNF142P52746 1687 aaPredicted RBP21.57■■□□□ 1.04
LINC00612-201ENST00000538094 CANXP27824 592 aaKnown RBP21.56■■□□□ 1.04
LINC00612-201ENST00000538094 ATAD2Q6PL18 1390 aa21.56■■□□□ 1.04
LINC00612-201ENST00000538094 COG6Q9Y2V7 657 aa21.56■■□□□ 1.04
LINC00612-201ENST00000538094 IGHDP01880 384 aa21.55■■□□□ 1.04
LINC00612-201ENST00000538094 SETD1BQ9UPS6 1966 aaKnown RBP21.55■■□□□ 1.04
LINC00612-201ENST00000538094 RGS3P49796 1198 aa21.55■■□□□ 1.04
LINC00612-201ENST00000538094 FRAT1Q92837 279 aaPredicted RBP21.55■■□□□ 1.04
LINC00612-201ENST00000538094 CD163L1Q9NR16 1453 aa21.54■■□□□ 1.04
LINC00612-201ENST00000538094 FYB1O15117 783 aa21.54■■□□□ 1.04
LINC00612-201ENST00000538094 TBX22Q9Y458 520 aa21.54■■□□□ 1.04
LINC00612-201ENST00000538094 FAM161AQ3B820 660 aa21.53■■□□□ 1.04
LINC00612-201ENST00000538094 C8orf34Q49A92 452 aa21.53■■□□□ 1.04
LINC00612-201ENST00000538094 TERF2IPQ9NYB0 399 aa21.53■■□□□ 1.04
LINC00612-201ENST00000538094 CABP1Q9NZU7 370 aa21.53■■□□□ 1.04
LINC00612-201ENST00000538094 AMOTL2Q9Y2J4 779 aa21.53■■□□□ 1.04
LINC00612-201ENST00000538094 WASLO00401 505 aaPredicted RBP21.53■■□□□ 1.04
LINC00612-201ENST00000538094 NCBP3Q53F19 620 aaKnown RBP21.53■■□□□ 1.04
LINC00612-201ENST00000538094 CLUAP1Q96AJ1 413 aa21.53■■□□□ 1.04
LINC00612-201ENST00000538094 SIRT1Q96EB6 747 aa21.52■■□□□ 1.04
LINC00612-201ENST00000538094 NCKAP5LQ9HCH0 1330 aa21.52■■□□□ 1.03
LINC00612-201ENST00000538094 ADGRB2O60241 1585 aa21.51■■□□□ 1.03
LINC00612-201ENST00000538094 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.5■■□□□ 1.03
LINC00612-201ENST00000538094 ANKLE2Q86XL3 938 aa21.5■■□□□ 1.03
LINC00612-201ENST00000538094 U2SURPO15042 1029 aaKnown RBP21.49■■□□□ 1.03
LINC00612-201ENST00000538094 PLEKHF1Q96S99 279 aa21.49■■□□□ 1.03
LINC00612-201ENST00000538094 BCL2L13Q9BXK5 485 aa21.49■■□□□ 1.03
LINC00612-201ENST00000538094 COL3A1P02461 1466 aaPredicted RBP21.49■■□□□ 1.03
LINC00612-201ENST00000538094 MYH16Q9H6N6 1097 aa21.49■■□□□ 1.03
LINC00612-201ENST00000538094 TNNQ9UQP3 1299 aa21.49■■□□□ 1.03
LINC00612-201ENST00000538094 RLBP1P12271 317 aa21.48■■□□□ 1.03
LINC00612-201ENST00000538094 DIP2AQ14689 1571 aa21.48■■□□□ 1.03
LINC00612-201ENST00000538094 HDGFL2Q7Z4V5 671 aaPredicted RBP21.47■■□□□ 1.03
LINC00612-201ENST00000538094 ANKRD26Q9UPS8 1709 aa21.46■■□□□ 1.03
LINC00612-201ENST00000538094 NUTM2FA1L443 756 aa21.46■■□□□ 1.03
LINC00612-201ENST00000538094 DDRGK1Q96HY6 314 aa21.46■■□□□ 1.03
LINC00612-201ENST00000538094 PRR36Q9H6K5 1346 aa21.46■■□□□ 1.03
LINC00612-201ENST00000538094 KCNA6P17658 529 aa21.45■■□□□ 1.03
LINC00612-201ENST00000538094 DEKP35659 375 aaKnown RBP21.45■■□□□ 1.03
LINC00612-201ENST00000538094 NUDT16Q96DE0 195 aaKnown RBP21.45■■□□□ 1.03
LINC00612-201ENST00000538094 TMPOP42166 694 aaKnown RBP21.45■■□□□ 1.02
LINC00612-201ENST00000538094 PPIP5K1Q6PFW1 1433 aa21.45■■□□□ 1.02
LINC00612-201ENST00000538094 TSR2Q969E8 191 aaKnown RBP21.44■■□□□ 1.02
LINC00612-201ENST00000538094 TRIM35Q9UPQ4 493 aa21.44■■□□□ 1.02
LINC00612-201ENST00000538094 LAS1LQ9Y4W2 734 aaKnown RBP21.44■■□□□ 1.02
LINC00612-201ENST00000538094 PTCH1Q13635 1447 aa21.44■■□□□ 1.02
LINC00612-201ENST00000538094 XRN1Q8IZH2 1706 aaKnown RBP21.44■■□□□ 1.02
LINC00612-201ENST00000538094 ATP7BP35670 1465 aa21.43■■□□□ 1.02
LINC00612-201ENST00000538094 PCDHB15Q9Y5E8 787 aa21.42■■□□□ 1.02
LINC00612-201ENST00000538094 PNPLA6Q8IY17 1366 aa21.41■■□□□ 1.02
LINC00612-201ENST00000538094 RTL5Q5HYW3 569 aaPredicted RBP21.41■■□□□ 1.02
LINC00612-201ENST00000538094 MAPK8IP3Q9UPT6 1336 aa21.41■■□□□ 1.02
LINC00612-201ENST00000538094 DIAPH1O60610 1272 aaKnown RBP21.4■■□□□ 1.02
LINC00612-201ENST00000538094 AAMPQ13685 434 aa21.4■■□□□ 1.02
LINC00612-201ENST00000538094 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.4■■□□□ 1.02
LINC00612-201ENST00000538094 CCDC61Q9Y6R9 512 aa21.4■■□□□ 1.02
LINC00612-201ENST00000538094 RBM33Q96EV2 1170 aaKnown RBP21.39■■□□□ 1.01
LINC00612-201ENST00000538094 EXOSC9Q06265 439 aaKnown RBP21.39■■□□□ 1.01
LINC00612-201ENST00000538094 PMFBP1Q8TBY8 1022 aa21.39■■□□□ 1.01
LINC00612-201ENST00000538094 CT47B1P0C2W7 299 aaPredicted RBP21.38■■□□□ 1.01
LINC00612-201ENST00000538094 NPHP4O75161 1426 aaPredicted RBP21.38■■□□□ 1.01
LINC00612-201ENST00000538094 CPSF1Q10570 1443 aaKnown RBP21.38■■□□□ 1.01
LINC00612-201ENST00000538094 FBLN1P23142 703 aa21.37■■□□□ 1.01
LINC00612-201ENST00000538094 KIF20BQ96Q89 1820 aa21.37■■□□□ 1.01
LINC00612-201ENST00000538094 SLC4A3P48751 1232 aa21.37■■□□□ 1.01
LINC00612-201ENST00000538094 RIPK4P57078 832 aa21.37■■□□□ 1.01
LINC00612-201ENST00000538094 PIK3R4Q99570 1358 aa21.37■■□□□ 1.01
LINC00612-201ENST00000538094 ZKSCAN2Q63HK3 967 aa21.36■■□□□ 1.01
LINC00612-201ENST00000538094 CDC42BPGQ6DT37 1551 aa21.35■■□□□ 1.01
LINC00612-201ENST00000538094 MVPQ14764 893 aaKnown RBP21.35■■□□□ 1.01
LINC00612-201ENST00000538094 CHD2O14647 1828 aaKnown RBP21.35■■□□□ 1.01
LINC00612-201ENST00000538094 POLKQ9UBT6 870 aa21.35■■□□□ 1.01
LINC00612-201ENST00000538094 KDM4FA0A1W2PPD8 638 aa21.34■■□□□ 1.01
LINC00612-201ENST00000538094 IL16Q14005 1332 aa21.34■■□□□ 1.01
LINC00612-201ENST00000538094 NEFMP07197 916 aa21.33■■□□□ 1.01
LINC00612-201ENST00000538094 DZIP1LQ8IYY4 767 aaKnown RBP21.33■■□□□ 1.01
LINC00612-201ENST00000538094 SMC4Q9NTJ3 1288 aa21.33■■□□□ 1.01
LINC00612-201ENST00000538094 PPM1GO15355 546 aaPredicted RBP21.33■■□□□ 1
LINC00612-201ENST00000538094 SSH1Q8WYL5 1049 aa21.33■■□□□ 1
LINC00612-201ENST00000538094 BCL11AQ9H165 835 aa21.33■■□□□ 1
LINC00612-201ENST00000538094 PNNQ9H307 717 aaKnown RBP21.32■■□□□ 1
LINC00612-201ENST00000538094 FCHSD2O94868 740 aa21.32■■□□□ 1
LINC00612-201ENST00000538094 FTSJ3Q8IY81 847 aaKnown RBP21.32■■□□□ 1
LINC00612-201ENST00000538094 TOPAZ1Q8N9V7 1692 aa21.32■■□□□ 1
LINC00612-201ENST00000538094 ZRANB1Q9UGI0 708 aa21.31■■□□□ 1
LINC00612-201ENST00000538094 VIRMAQ69YN4 1812 aaKnown RBP21.31■■□□□ 1
LINC00612-201ENST00000538094 EDC4Q6P2E9 1401 aaKnown RBP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms