RNA–Protein interactions for RNA: ENST00000537869.5

SNHG1-205, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 1,038 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-205ENST00000537869 EVA1BQ9NVM1 165 aa10.72□□□□□ -0.69
SNHG1-205ENST00000537869 PALM3A6NDB9 673 aaPredicted RBP10.71□□□□□ -0.69
SNHG1-205ENST00000537869 ZBBXA8MT70 800 aa10.71□□□□□ -0.69
SNHG1-205ENST00000537869 TLL1O43897 1013 aa10.71□□□□□ -0.69
SNHG1-205ENST00000537869 ZPR1O75312 459 aa10.71□□□□□ -0.69
SNHG1-205ENST00000537869 CCNYL3P0C7X3 344 aa10.71□□□□□ -0.69
SNHG1-205ENST00000537869 EIF4G2P78344 907 aaKnown RBP eCLIP10.71□□□□□ -0.69
SNHG1-205ENST00000537869 RETREG2Q8NC44 543 aa10.71□□□□□ -0.69
SNHG1-205ENST00000537869 NUDT12Q9BQG2 462 aa10.71□□□□□ -0.69
SNHG1-205ENST00000537869 ACIN1Q9UKV3 1341 aaKnown RBP10.7□□□□□ -0.7
SNHG1-205ENST00000537869 PTPN5P54829 565 aa10.7□□□□□ -0.7
SNHG1-205ENST00000537869 MTRQ99707 1265 aa10.7□□□□□ -0.7
SNHG1-205ENST00000537869 PODXL2Q9NZ53 605 aa10.7□□□□□ -0.7
SNHG1-205ENST00000537869 TFIP11Q9UBB9 837 aaKnown RBP10.7□□□□□ -0.7
SNHG1-205ENST00000537869 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.69□□□□□ -0.7
SNHG1-205ENST00000537869 SRPK2P78362 688 aaKnown RBP10.69□□□□□ -0.7
SNHG1-205ENST00000537869 KCNH2Q12809 1159 aa10.69□□□□□ -0.7
SNHG1-205ENST00000537869 NYAP1Q6ZVC0 841 aa10.69□□□□□ -0.7
SNHG1-205ENST00000537869 ZC3H4Q9UPT8 1303 aaKnown RBP10.68□□□□□ -0.7
SNHG1-205ENST00000537869 LMOD1P29536 600 aaPredicted RBP10.68□□□□□ -0.7
SNHG1-205ENST00000537869 ZNF516Q92618 1163 aa10.68□□□□□ -0.7
SNHG1-205ENST00000537869 PBXIP1Q96AQ6 731 aa10.68□□□□□ -0.7
SNHG1-205ENST00000537869 TRAIPQ9BWF2 469 aa10.68□□□□□ -0.7
SNHG1-205ENST00000537869 ADH1BP00325 375 aa10.67□□□□□ -0.7
SNHG1-205ENST00000537869 TJAP1Q5JTD0 557 aa10.66□□□□□ -0.7
SNHG1-205ENST00000537869 TBC1D9Q6ZT07 1266 aa10.66□□□□□ -0.7
SNHG1-205ENST00000537869 CDAN1Q8IWY9 1227 aa10.65□□□□□ -0.7
SNHG1-205ENST00000537869 PTCRAQ6ISU1 281 aaPredicted RBP10.64□□□□□ -0.71
SNHG1-205ENST00000537869 PDXDC2PQ6P474 469 aa10.64□□□□□ -0.71
SNHG1-205ENST00000537869 CCDC24Q8N4L8 307 aa10.64□□□□□ -0.71
SNHG1-205ENST00000537869 ARMC2Q8NEN0 867 aa10.64□□□□□ -0.71
SNHG1-205ENST00000537869 OCSTAMPQ9BR26 566 aa10.64□□□□□ -0.71
SNHG1-205ENST00000537869 CDCA8Q53HL2 280 aa10.63□□□□□ -0.71
SNHG1-205ENST00000537869 SLC6A16Q9GZN6 736 aa10.63□□□□□ -0.71
SNHG1-205ENST00000537869 IL21Q9HBE4 155 aa10.63□□□□□ -0.71
SNHG1-205ENST00000537869 MAFBQ9Y5Q3 323 aaPredicted RBP10.63□□□□□ -0.71
SNHG1-205ENST00000537869 PIK3CDO00329 1044 aa10.62□□□□□ -0.71
SNHG1-205ENST00000537869 PTK2Q05397 1052 aa10.62□□□□□ -0.71
SNHG1-205ENST00000537869 ATP9BO43861 1147 aa10.61□□□□□ -0.71
SNHG1-205ENST00000537869 NKX2-3Q8TAU0 364 aa10.61□□□□□ -0.71
SNHG1-205ENST00000537869 GPKOWQ92917 476 aaPredicted RBP eCLIP10.61□□□□□ -0.712e-31■■■□□ 17.2
SNHG1-205ENST00000537869 UNC93B1Q9H1C4 597 aa10.61□□□□□ -0.71
SNHG1-205ENST00000537869 MYT1LQ9UL68 1186 aa10.61□□□□□ -0.71
SNHG1-205ENST00000537869 GPSM3Q9Y4H4 160 aa10.61□□□□□ -0.71
SNHG1-205ENST00000537869 NBPF14Q5TI25 921 aa10.6□□□□□ -0.71
SNHG1-205ENST00000537869 POTEGQ6S5H5 508 aa10.6□□□□□ -0.71
SNHG1-205ENST00000537869 ZBTB7CA1YPR0 619 aa10.59□□□□□ -0.71
SNHG1-205ENST00000537869 CEP126Q9P2H0 1117 aa10.58□□□□□ -0.72
SNHG1-205ENST00000537869 PCDHB9Q9Y5E1 797 aa10.58□□□□□ -0.72
SNHG1-205ENST00000537869 AEBP1Q8IUX7 1158 aa10.57□□□□□ -0.72
SNHG1-205ENST00000537869 FAM174AQ8TBP5 190 aa10.57□□□□□ -0.72
SNHG1-205ENST00000537869 ADAM32Q8TC27 787 aa10.57□□□□□ -0.72
SNHG1-205ENST00000537869 ARHGAP9Q9BRR9 750 aa10.57□□□□□ -0.72
SNHG1-205ENST00000537869 S1PR4O95977 384 aa10.56□□□□□ -0.72
SNHG1-205ENST00000537869 SKIP12755 728 aa10.56□□□□□ -0.72
SNHG1-205ENST00000537869 NFATC2IPQ8NCF5 419 aa10.56□□□□□ -0.72
SNHG1-205ENST00000537869 CARNS1A5YM72 827 aa10.55□□□□□ -0.72
SNHG1-205ENST00000537869 CSB-PGBD3P0DP91 1061 aa10.55□□□□□ -0.72
SNHG1-205ENST00000537869 PDE4CQ08493 712 aa10.55□□□□□ -0.72
SNHG1-205ENST00000537869 KANK4Q5T7N3 995 aaPredicted RBP10.55□□□□□ -0.72
SNHG1-205ENST00000537869 SH3BP5LQ7L8J4 393 aa10.55□□□□□ -0.72
SNHG1-205ENST00000537869 KCTD17Q8N5Z5 321 aa10.55□□□□□ -0.72
SNHG1-205ENST00000537869 BAP1Q92560 729 aa10.55□□□□□ -0.72
SNHG1-205ENST00000537869 ATG7O95352 703 aa10.54□□□□□ -0.72
SNHG1-205ENST00000537869 MCCD1P59942 119 aaPredicted RBP10.54□□□□□ -0.72
SNHG1-205ENST00000537869 ZBTB33Q86T24 672 aa10.54□□□□□ -0.72
SNHG1-205ENST00000537869 PHTF2Q8N3S3 785 aa10.54□□□□□ -0.72
SNHG1-205ENST00000537869 VRTNQ9H8Y1 702 aa10.54□□□□□ -0.72
SNHG1-205ENST00000537869 FCF1Q9Y324 198 aaKnown RBP10.54□□□□□ -0.72
SNHG1-205ENST00000537869 SLFNL1Q499Z3 407 aa10.53□□□□□ -0.72
SNHG1-205ENST00000537869 DEPDC4Q8N2C3 294 aa10.53□□□□□ -0.72
SNHG1-205ENST00000537869 USP17L3A6NCW0 530 aa10.52□□□□□ -0.73
SNHG1-205ENST00000537869 USP17L4A6NCW7 530 aa10.52□□□□□ -0.73
SNHG1-205ENST00000537869 USP17L5A8MUK1 530 aa10.52□□□□□ -0.73
SNHG1-205ENST00000537869 USP17L2Q6R6M4 530 aa10.52□□□□□ -0.73
SNHG1-205ENST00000537869 USP17L1Q7RTZ2 530 aa10.52□□□□□ -0.73
SNHG1-205ENST00000537869 USTQ9Y2C2 406 aa10.52□□□□□ -0.73
SNHG1-205ENST00000537869 MAGEB6P1A0A0J9YX57 407 aa10.51□□□□□ -0.73
SNHG1-205ENST00000537869 LINC01559Q495D7 138 aa10.51□□□□□ -0.73
SNHG1-205ENST00000537869 SH3RF1Q7Z6J0 888 aa10.51□□□□□ -0.73
SNHG1-205ENST00000537869 ZNF592Q92610 1267 aa10.51□□□□□ -0.73
SNHG1-205ENST00000537869 FOXJ1Q92949 421 aa10.51□□□□□ -0.73
SNHG1-205ENST00000537869 CARD14Q9BXL6 1004 aa10.51□□□□□ -0.73
SNHG1-205ENST00000537869 PPEF1O14829 653 aaPredicted RBP10.5□□□□□ -0.73
SNHG1-205ENST00000537869 DZIP3Q86Y13 1208 aaKnown RBP10.5□□□□□ -0.73
SNHG1-205ENST00000537869 RNF135Q8IUD6 432 aa10.5□□□□□ -0.73
SNHG1-205ENST00000537869 PLEKHM2Q8IWE5 1019 aa10.5□□□□□ -0.73
SNHG1-205ENST00000537869 AGERQ15109 404 aa10.49□□□□□ -0.73
SNHG1-205ENST00000537869 TSGA10IPQ3SY00 556 aa10.49□□□□□ -0.73
SNHG1-205ENST00000537869 C4orf48Q5BLP8 95 aa10.49□□□□□ -0.73
SNHG1-205ENST00000537869 BPHLQ86WA6 291 aaPredicted RBP10.48□□□□□ -0.73
SNHG1-205ENST00000537869 ZNF511Q8NB15 262 aa10.48□□□□□ -0.73
SNHG1-205ENST00000537869 PLPP7Q8NBV4 271 aa10.48□□□□□ -0.73
SNHG1-205ENST00000537869 MKRN1Q9UHC7 482 aaKnown RBP10.48□□□□□ -0.73
SNHG1-205ENST00000537869 TMEM88BA6NKF7 163 aa10.47□□□□□ -0.73
SNHG1-205ENST00000537869 NCOA4Q13772 614 aa10.47□□□□□ -0.73
SNHG1-205ENST00000537869 ERFEQ4G0M1 354 aa10.47□□□□□ -0.73
SNHG1-205ENST00000537869 CHIC2Q9UKJ5 165 aa10.47□□□□□ -0.73
SNHG1-205ENST00000537869 KCNC4Q03721 635 aa10.46□□□□□ -0.73
SNHG1-205ENST00000537869 GIGYF1O75420 1035 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms