RNA–Protein interactions for RNA: ENST00000537488.1

ATN1-203, Transcript of atrophin 1, humanhuman

TSL 2

Gene ATN1, Length 899 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-203ENST00000537488 CCDC61Q9Y6R9 512 aa23.5■■□□□ 1.35
ATN1-203ENST00000537488 NUTM2GQ5VZR2 741 aa23.49■■□□□ 1.35
ATN1-203ENST00000537488 FAM83GA6ND36 823 aa23.48■■□□□ 1.35
ATN1-203ENST00000537488 UPF1Q92900 1129 aaKnown RBP eCLIP23.48■■□□□ 1.35
ATN1-203ENST00000537488 POLR3AO14802 1390 aaPredicted RBP23.48■■□□□ 1.35
ATN1-203ENST00000537488 TONSLQ96HA7 1378 aa23.48■■□□□ 1.35
ATN1-203ENST00000537488 PLEKHG3A1L390 1219 aa23.47■■□□□ 1.35
ATN1-203ENST00000537488 UNC5CLQ8IV45 518 aa23.47■■□□□ 1.35
ATN1-203ENST00000537488 PPIP5K1Q6PFW1 1433 aa23.47■■□□□ 1.35
ATN1-203ENST00000537488 GLI3P10071 1580 aa23.47■■□□□ 1.35
ATN1-203ENST00000537488 NWD2Q9ULI1 1742 aa23.45■■□□□ 1.34
ATN1-203ENST00000537488 GJD4Q96KN9 370 aaPredicted RBP23.44■■□□□ 1.34
ATN1-203ENST00000537488 PHRF1Q9P1Y6 1649 aaKnown RBP23.44■■□□□ 1.34
ATN1-203ENST00000537488 NRAPQ86VF7 1730 aa23.43■■□□□ 1.34
ATN1-203ENST00000537488 CABP1Q9NZU7 370 aa23.43■■□□□ 1.34
ATN1-203ENST00000537488 RALGAPBQ86X10 1494 aa23.43■■□□□ 1.34
ATN1-203ENST00000537488 BRWD3Q6RI45 1802 aa23.41■■□□□ 1.34
ATN1-203ENST00000537488 CARD11Q9BXL7 1154 aa23.41■■□□□ 1.34
ATN1-203ENST00000537488 COL14A1Q05707 1796 aaKnown RBP23.4■■□□□ 1.34
ATN1-203ENST00000537488 EVC2Q86UK5 1308 aa23.39■■□□□ 1.34
ATN1-203ENST00000537488 BTG4Q9NY30 223 aa23.38■■□□□ 1.33
ATN1-203ENST00000537488 ZC3H6P61129 1189 aaKnown RBP23.36■■□□□ 1.33
ATN1-203ENST00000537488 CHRNA2Q15822 529 aa23.36■■□□□ 1.33
ATN1-203ENST00000537488 VPS72Q15906 364 aa23.36■■□□□ 1.33
ATN1-203ENST00000537488 ABTB2Q8N961 1025 aa23.36■■□□□ 1.33
ATN1-203ENST00000537488 PCGF6Q9BYE7 350 aa23.36■■□□□ 1.33
ATN1-203ENST00000537488 CCDC9Q9Y3X0 531 aaKnown RBP23.36■■□□□ 1.33
ATN1-203ENST00000537488 KIAA0232Q92628 1395 aa23.35■■□□□ 1.33
ATN1-203ENST00000537488 AKAP12Q02952 1782 aa23.35■■□□□ 1.33
ATN1-203ENST00000537488 NRKQ7Z2Y5 1582 aa23.34■■□□□ 1.33
ATN1-203ENST00000537488 USP6P35125 1406 aa23.33■■□□□ 1.33
ATN1-203ENST00000537488 PRDM11Q9NQV5 511 aa23.33■■□□□ 1.33
ATN1-203ENST00000537488 PIK3C2AO00443 1686 aa23.31■■□□□ 1.32
ATN1-203ENST00000537488 SEPT12Q8IYM1 358 aa23.3■■□□□ 1.32
ATN1-203ENST00000537488 SSH2Q76I76 1423 aa23.3■■□□□ 1.32
ATN1-203ENST00000537488 ATAD2Q6PL18 1390 aa23.29■■□□□ 1.32
ATN1-203ENST00000537488 USP19O94966 1318 aa23.29■■□□□ 1.32
ATN1-203ENST00000537488 SBNO2Q9Y2G9 1366 aa23.27■■□□□ 1.31
ATN1-203ENST00000537488 FAM98CQ17RN3 349 aaKnown RBP23.26■■□□□ 1.31
ATN1-203ENST00000537488 STRN4Q9NRL3 753 aa23.26■■□□□ 1.31
ATN1-203ENST00000537488 GCP02774 474 aa23.25■■□□□ 1.31
ATN1-203ENST00000537488 NLRP6P59044 892 aa23.25■■□□□ 1.31
ATN1-203ENST00000537488 NLRP13Q86W25 1043 aa23.25■■□□□ 1.31
ATN1-203ENST00000537488 CAMTA1Q9Y6Y1 1673 aa23.25■■□□□ 1.31
ATN1-203ENST00000537488 MON2Q7Z3U7 1717 aa23.25■■□□□ 1.31
ATN1-203ENST00000537488 ST20-MTHFSA0A0A6YYL1 179 aa23.24■■□□□ 1.31
ATN1-203ENST00000537488 ONECUT3O60422 494 aaPredicted RBP23.24■■□□□ 1.31
ATN1-203ENST00000537488 LMO7Q8WWI1 1683 aa23.24■■□□□ 1.31
ATN1-203ENST00000537488 TTC21BQ7Z4L5 1316 aa23.24■■□□□ 1.31
ATN1-203ENST00000537488 CPSF1Q10570 1443 aaKnown RBP23.24■■□□□ 1.31
ATN1-203ENST00000537488 ZBTB7CA1YPR0 619 aa23.23■■□□□ 1.31
ATN1-203ENST00000537488 SPATA31A5Q5VU36 1347 aa23.23■■□□□ 1.31
ATN1-203ENST00000537488 SPATA31A7Q8IWB4 1347 aa23.23■■□□□ 1.31
ATN1-203ENST00000537488 CD163L1Q9NR16 1453 aa23.23■■□□□ 1.31
ATN1-203ENST00000537488 EP400Q96L91 3159 aa23.22■■□□□ 1.31
ATN1-203ENST00000537488 A0A0G2JS52 829 aa23.22■■□□□ 1.31
ATN1-203ENST00000537488 MYT1Q01538 1121 aa23.22■■□□□ 1.31
ATN1-203ENST00000537488 TESK2Q96S53 571 aa23.22■■□□□ 1.31
ATN1-203ENST00000537488 ZRANB1Q9UGI0 708 aa23.22■■□□□ 1.31
ATN1-203ENST00000537488 BRD4O60885 1362 aaPredicted RBP23.22■■□□□ 1.31
ATN1-203ENST00000537488 SLIT3O75094 1523 aa23.22■■□□□ 1.31
ATN1-203ENST00000537488 TMC1Q8TDI8 760 aa23.21■■□□□ 1.31
ATN1-203ENST00000537488 SLC12A5Q9H2X9 1139 aa23.21■■□□□ 1.31
ATN1-203ENST00000537488 KTN1Q86UP2 1357 aaKnown RBP23.21■■□□□ 1.31
ATN1-203ENST00000537488 CPDO75976 1380 aa23.2■■□□□ 1.3
ATN1-203ENST00000537488 ZNF692Q9BU19 519 aaPredicted RBP23.19■■□□□ 1.3
ATN1-203ENST00000537488 RGPD5Q99666 1765 aa23.19■■□□□ 1.3
ATN1-203ENST00000537488 SPATA31A1Q5TZJ5 1347 aa23.18■■□□□ 1.3
ATN1-203ENST00000537488 SOX12O15370 315 aa23.18■■□□□ 1.3
ATN1-203ENST00000537488 FAM182BQ5T319 152 aa23.18■■□□□ 1.3
ATN1-203ENST00000537488 LARP1Q6PKG0 1096 aaKnown RBP23.18■■□□□ 1.3
ATN1-203ENST00000537488 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.18■■□□□ 1.3
ATN1-203ENST00000537488 USP35Q9P2H5 1018 aa23.18■■□□□ 1.3
ATN1-203ENST00000537488 COL18A1P39060 1754 aa23.18■■□□□ 1.3
ATN1-203ENST00000537488 THSD7AQ9UPZ6 1657 aa23.18■■□□□ 1.3
ATN1-203ENST00000537488 KRT27Q7Z3Y8 459 aa23.17■■□□□ 1.3
ATN1-203ENST00000537488 EVA1CP58658 441 aa23.16■■□□□ 1.3
ATN1-203ENST00000537488 USP47Q96K76 1375 aa23.14■■□□□ 1.3
ATN1-203ENST00000537488 NME9Q86XW9 330 aa23.14■■□□□ 1.29
ATN1-203ENST00000537488 TTC21AQ8NDW8 1320 aa23.13■■□□□ 1.29
ATN1-203ENST00000537488 COL5A2P05997 1499 aaPredicted RBP23.12■■□□□ 1.29
ATN1-203ENST00000537488 AXIN2Q9Y2T1 843 aa23.12■■□□□ 1.29
ATN1-203ENST00000537488 A0A1W2PP64 1363 aa23.12■■□□□ 1.29
ATN1-203ENST00000537488 NFAT5O94916 1531 aa23.11■■□□□ 1.29
ATN1-203ENST00000537488 DEFB132Q7Z7B7 95 aa23.1■■□□□ 1.29
ATN1-203ENST00000537488 CLSPNQ9HAW4 1339 aa23.09■■□□□ 1.29
ATN1-203ENST00000537488 HDGFL2Q7Z4V5 671 aaPredicted RBP23.09■■□□□ 1.29
ATN1-203ENST00000537488 CCER1Q8TC90 406 aaPredicted RBP23.09■■□□□ 1.29
ATN1-203ENST00000537488 AATKQ6ZMQ8 1374 aa23.09■■□□□ 1.29
ATN1-203ENST00000537488 BLMP54132 1417 aaPredicted RBP23.08■■□□□ 1.29
ATN1-203ENST00000537488 ARHGEF25Q86VW2 580 aa23.08■■□□□ 1.29
ATN1-203ENST00000537488 USP54Q70EL1 1684 aa23.08■■□□□ 1.29
ATN1-203ENST00000537488 PUS7Q96PZ0 661 aaKnown RBP23.07■■□□□ 1.28
ATN1-203ENST00000537488 CCDC125Q86Z20 511 aa23.06■■□□□ 1.28
ATN1-203ENST00000537488 LTN1O94822 1766 aa23.06■■□□□ 1.28
ATN1-203ENST00000537488 USP31Q70CQ4 1352 aa23.05■■□□□ 1.28
ATN1-203ENST00000537488 TCP11L2Q8N4U5 519 aa23.05■■□□□ 1.28
ATN1-203ENST00000537488 TERF2IPQ9NYB0 399 aa23.05■■□□□ 1.28
ATN1-203ENST00000537488 TIMELESSQ9UNS1 1208 aa23.05■■□□□ 1.28
ATN1-203ENST00000537488 EDC4Q6P2E9 1401 aaKnown RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms