RNA–Protein interactions for RNA: ENST00000537304.5

LMO3-215, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 1,685 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-215ENST00000537304 ZNF445P59923 1031 aa13.47□□□□□ -0.25
LMO3-215ENST00000537304 CD109Q6YHK3 1445 aa13.47□□□□□ -0.25
LMO3-215ENST00000537304 ERVK-7P63135 1459 aa13.47□□□□□ -0.25
LMO3-215ENST00000537304 K7ELQ4 463 aaPredicted RBP13.47□□□□□ -0.25
LMO3-215ENST00000537304 DYNC1I1O14576 645 aa13.47□□□□□ -0.25
LMO3-215ENST00000537304 SMAP1Q8IYB5 467 aaPredicted RBP13.47□□□□□ -0.25
LMO3-215ENST00000537304 TCP11L2Q8N4U5 519 aa13.47□□□□□ -0.25
LMO3-215ENST00000537304 IPO8O15397 1037 aaKnown RBP13.46□□□□□ -0.26
LMO3-215ENST00000537304 NUCB2P80303 420 aa13.46□□□□□ -0.26
LMO3-215ENST00000537304 BMP2KLQ5H9B9 411 aa13.46□□□□□ -0.26
LMO3-215ENST00000537304 ATP7AQ04656 1500 aa13.45□□□□□ -0.26
LMO3-215ENST00000537304 MORC1Q86VD1 984 aa13.45□□□□□ -0.26
LMO3-215ENST00000537304 GAS2L3Q86XJ1 694 aa13.45□□□□□ -0.26
LMO3-215ENST00000537304 NOL7Q9UMY1 257 aaKnown RBP13.45□□□□□ -0.26
LMO3-215ENST00000537304 NSD2O96028 1365 aa13.45□□□□□ -0.26
LMO3-215ENST00000537304 ABCC11Q96J66 1382 aa13.45□□□□□ -0.26
LMO3-215ENST00000537304 ADGRB2O60241 1585 aa13.45□□□□□ -0.26
LMO3-215ENST00000537304 CYB5RLQ6IPT4 315 aa13.44□□□□□ -0.26
LMO3-215ENST00000537304 IL16Q14005 1332 aa13.44□□□□□ -0.26
LMO3-215ENST00000537304 ZNF518AQ6AHZ1 1483 aa13.44□□□□□ -0.26
LMO3-215ENST00000537304 NUCB1Q02818 461 aa13.44□□□□□ -0.26
LMO3-215ENST00000537304 DDX49Q9Y6V7 483 aaKnown RBP13.44□□□□□ -0.26
LMO3-215ENST00000537304 TET3O43151 1660 aa13.43□□□□□ -0.26
LMO3-215ENST00000537304 MAP3K4Q9Y6R4 1608 aa13.43□□□□□ -0.26
LMO3-215ENST00000537304 NCLP19338 710 aaKnown RBP13.42□□□□□ -0.26
LMO3-215ENST00000537304 ATF7IPQ6VMQ6 1270 aa13.42□□□□□ -0.26
LMO3-215ENST00000537304 SMC4Q9NTJ3 1288 aa13.42□□□□□ -0.26
LMO3-215ENST00000537304 CCDC39Q9UFE4 941 aa13.42□□□□□ -0.26
LMO3-215ENST00000537304 CLTCL1P53675 1640 aa13.41□□□□□ -0.26
LMO3-215ENST00000537304 ZNF428Q96B54 188 aa13.41□□□□□ -0.26
LMO3-215ENST00000537304 GCC1Q96CN9 775 aa13.41□□□□□ -0.26
LMO3-215ENST00000537304 CWC22Q9HCG8 908 aaKnown RBP13.41□□□□□ -0.26
LMO3-215ENST00000537304 YEATS2Q9ULM3 1422 aa13.41□□□□□ -0.26
LMO3-215ENST00000537304 NEO1Q92859 1461 aa13.41□□□□□ -0.26
LMO3-215ENST00000537304 GLI2P10070 1586 aa13.41□□□□□ -0.26
LMO3-215ENST00000537304 SETBP1Q9Y6X0 1596 aa13.41□□□□□ -0.26
LMO3-215ENST00000537304 DEPDC5O75140 1603 aa13.41□□□□□ -0.26
LMO3-215ENST00000537304 ITPRIPQ8IWB1 547 aa13.4□□□□□ -0.26
LMO3-215ENST00000537304 PDLIM2Q96JY6 352 aa13.4□□□□□ -0.26
LMO3-215ENST00000537304 CARD14Q9BXL6 1004 aa13.4□□□□□ -0.26
LMO3-215ENST00000537304 SASS6Q6UVJ0 657 aa13.4□□□□□ -0.26
LMO3-215ENST00000537304 PUS7Q96PZ0 661 aaKnown RBP13.4□□□□□ -0.26
LMO3-215ENST00000537304 NSD3Q9BZ95 1437 aa13.4□□□□□ -0.26
LMO3-215ENST00000537304 KIDINS220Q9ULH0 1771 aa13.4□□□□□ -0.26
LMO3-215ENST00000537304 POGZQ7Z3K3 1410 aa13.39□□□□□ -0.27
LMO3-215ENST00000537304 BAG4O95429 457 aaKnown RBP13.39□□□□□ -0.27
LMO3-215ENST00000537304 RIPK4P57078 832 aa13.39□□□□□ -0.27
LMO3-215ENST00000537304 RABEP1Q15276 862 aa13.39□□□□□ -0.27
LMO3-215ENST00000537304 CHD1LQ86WJ1 897 aa13.39□□□□□ -0.27
LMO3-215ENST00000537304 ZKSCAN5Q9Y2L8 839 aa13.39□□□□□ -0.27
LMO3-215ENST00000537304 ABCA6Q8N139 1617 aa13.38□□□□□ -0.27
LMO3-215ENST00000537304 NEUROD2Q15784 382 aa13.38□□□□□ -0.27
LMO3-215ENST00000537304 ZBTB40Q9NUA8 1239 aa13.38□□□□□ -0.27
LMO3-215ENST00000537304 UQCRHLA0A096LP55 91 aa13.37□□□□□ -0.27
LMO3-215ENST00000537304 UQCRHP07919 91 aa13.37□□□□□ -0.27
LMO3-215ENST00000537304 TRIM27P14373 513 aa13.37□□□□□ -0.27
LMO3-215ENST00000537304 ALDH1L2Q3SY69 923 aa13.37□□□□□ -0.27
LMO3-215ENST00000537304 UTP14CQ5TAP6 766 aaKnown RBP13.37□□□□□ -0.27
LMO3-215ENST00000537304 BCL2L13Q9BXK5 485 aa13.37□□□□□ -0.27
LMO3-215ENST00000537304 PRDM4Q9UKN5 801 aa13.37□□□□□ -0.27
LMO3-215ENST00000537304 R3HCC1Q9Y3T6 440 aaKnown RBP13.37□□□□□ -0.27
LMO3-215ENST00000537304 MLH3Q9UHC1 1453 aa13.37□□□□□ -0.27
LMO3-215ENST00000537304 TNNT2P45379 298 aaPredicted RBP13.37□□□□□ -0.27
LMO3-215ENST00000537304 VWDEQ8N2E2 1590 aa13.37□□□□□ -0.27
LMO3-215ENST00000537304 FAM13BQ9NYF5 915 aa13.36□□□□□ -0.27
LMO3-215ENST00000537304 PODXL2Q9NZ53 605 aa13.36□□□□□ -0.27
LMO3-215ENST00000537304 TNNQ9UQP3 1299 aa13.36□□□□□ -0.27
LMO3-215ENST00000537304 RRP7AQ9Y3A4 280 aaKnown RBP13.36□□□□□ -0.27
LMO3-215ENST00000537304 NOS1P29475 1434 aa13.36□□□□□ -0.27
LMO3-215ENST00000537304 CDC45O75419 566 aa13.35□□□□□ -0.27
LMO3-215ENST00000537304 ZSCAN23Q3MJ62 389 aa13.35□□□□□ -0.27
LMO3-215ENST00000537304 NRXN1Q9ULB1 1477 aa13.35□□□□□ -0.27
LMO3-215ENST00000537304 IFT172Q9UG01 1749 aa13.35□□□□□ -0.27
LMO3-215ENST00000537304 ZC3H13Q5T200 1668 aaKnown RBP13.34□□□□□ -0.27
LMO3-215ENST00000537304 MBD3O95983 291 aa13.34□□□□□ -0.27
LMO3-215ENST00000537304 SSFA2P28290 1259 aa13.34□□□□□ -0.27
LMO3-215ENST00000537304 BRPF1P55201 1214 aaPredicted RBP13.34□□□□□ -0.27
LMO3-215ENST00000537304 HMGN5P82970 282 aaKnown RBP13.34□□□□□ -0.27
LMO3-215ENST00000537304 KIF1BO60333 1816 aa13.34□□□□□ -0.27
LMO3-215ENST00000537304 HECW2Q9P2P5 1572 aa13.34□□□□□ -0.27
LMO3-215ENST00000537304 MED14O60244 1454 aa13.34□□□□□ -0.27
LMO3-215ENST00000537304 KIF2CQ99661 725 aa13.34□□□□□ -0.27
LMO3-215ENST00000537304 MROH1Q8NDA8 1641 aa13.33□□□□□ -0.28
LMO3-215ENST00000537304 KLHL34Q8N239 644 aa13.33□□□□□ -0.28
LMO3-215ENST00000537304 CCDC94Q9BW85 323 aaPredicted RBP13.33□□□□□ -0.28
LMO3-215ENST00000537304 DIP2BQ9P265 1576 aa13.32□□□□□ -0.28
LMO3-215ENST00000537304 KIF3BO15066 747 aa13.32□□□□□ -0.28
LMO3-215ENST00000537304 MTHFSP49914 203 aa13.32□□□□□ -0.28
LMO3-215ENST00000537304 RBM10P98175 930 aaKnown RBP13.32□□□□□ -0.28
LMO3-215ENST00000537304 SSH1Q8WYL5 1049 aa13.32□□□□□ -0.28
LMO3-215ENST00000537304 SYAP1Q96A49 352 aaPredicted RBP13.32□□□□□ -0.28
LMO3-215ENST00000537304 PRIMPOLQ96LW4 560 aa13.32□□□□□ -0.28
LMO3-215ENST00000537304 ST18O60284 1047 aa13.31□□□□□ -0.28
LMO3-215ENST00000537304 U2AF1L5P0DN76 240 aaPredicted RBP13.31□□□□□ -0.28
LMO3-215ENST00000537304 U2AF1Q01081 240 aaKnown RBP eCLIP13.31□□□□□ -0.28
LMO3-215ENST00000537304 EXOSC9Q06265 439 aaKnown RBP13.31□□□□□ -0.28
LMO3-215ENST00000537304 CASC1Q6TDU7 716 aa13.31□□□□□ -0.28
LMO3-215ENST00000537304 LRSAM1Q6UWE0 723 aa13.31□□□□□ -0.28
LMO3-215ENST00000537304 TBC1D9Q6ZT07 1266 aa13.31□□□□□ -0.28
LMO3-215ENST00000537304 TMEM57Q8N5G2 664 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms