RNA–Protein interactions for RNA: ENST00000536943.1

OTUB1-208, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 3

Gene OTUB1, Length 458 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-208ENST00000536943 NBPF8Q3BBV2 869 aa23.16■■□□□ 1.3
OTUB1-208ENST00000536943 EVC2Q86UK5 1308 aa23.15■■□□□ 1.3
OTUB1-208ENST00000536943 ALS2Q96Q42 1657 aa23.15■■□□□ 1.3
OTUB1-208ENST00000536943 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.14■■□□□ 1.3
OTUB1-208ENST00000536943 POLR3AO14802 1390 aaPredicted RBP23.14■■□□□ 1.29
OTUB1-208ENST00000536943 ABCA3Q99758 1704 aa23.13■■□□□ 1.29
OTUB1-208ENST00000536943 FAM83GA6ND36 823 aa23.13■■□□□ 1.29
OTUB1-208ENST00000536943 PPIP5K1Q6PFW1 1433 aa23.13■■□□□ 1.29
OTUB1-208ENST00000536943 ATAD2Q6PL18 1390 aa23.13■■□□□ 1.29
OTUB1-208ENST00000536943 TOPAZ1Q8N9V7 1692 aa23.12■■□□□ 1.29
OTUB1-208ENST00000536943 CARD11Q9BXL7 1154 aa23.11■■□□□ 1.29
OTUB1-208ENST00000536943 VPS72Q15906 364 aa23.1■■□□□ 1.29
OTUB1-208ENST00000536943 NUTM2GQ5VZR2 741 aa23.1■■□□□ 1.29
OTUB1-208ENST00000536943 ABTB2Q8N961 1025 aa23.1■■□□□ 1.29
OTUB1-208ENST00000536943 PRDM11Q9NQV5 511 aa23.1■■□□□ 1.29
OTUB1-208ENST00000536943 PLCH1Q4KWH8 1693 aa23.09■■□□□ 1.29
OTUB1-208ENST00000536943 NWD2Q9ULI1 1742 aa23.09■■□□□ 1.29
OTUB1-208ENST00000536943 BTG4Q9NY30 223 aa23.09■■□□□ 1.29
OTUB1-208ENST00000536943 RALGAPBQ86X10 1494 aa23.09■■□□□ 1.29
OTUB1-208ENST00000536943 CABP1Q9NZU7 370 aa23.08■■□□□ 1.29
OTUB1-208ENST00000536943 A0A0G2JS52 829 aa23.07■■□□□ 1.28
OTUB1-208ENST00000536943 MYT1Q01538 1121 aa23.07■■□□□ 1.28
OTUB1-208ENST00000536943 COL14A1Q05707 1796 aaKnown RBP23.06■■□□□ 1.28
OTUB1-208ENST00000536943 NLRP13Q86W25 1043 aa23.05■■□□□ 1.28
OTUB1-208ENST00000536943 BRD4O60885 1362 aaPredicted RBP23.04■■□□□ 1.28
OTUB1-208ENST00000536943 GLI3P10071 1580 aa23.03■■□□□ 1.28
OTUB1-208ENST00000536943 ZC3H6P61129 1189 aaKnown RBP23.03■■□□□ 1.28
OTUB1-208ENST00000536943 SEPT12Q8IYM1 358 aa23.02■■□□□ 1.28
OTUB1-208ENST00000536943 KIAA0232Q92628 1395 aa23.01■■□□□ 1.27
OTUB1-208ENST00000536943 CRYBG1Q9Y4K1 1723 aa23■■□□□ 1.27
OTUB1-208ENST00000536943 CHRNA2Q15822 529 aa23■■□□□ 1.27
OTUB1-208ENST00000536943 ZNF692Q9BU19 519 aaPredicted RBP23■■□□□ 1.27
OTUB1-208ENST00000536943 CCDC125Q86Z20 511 aa22.99■■□□□ 1.27
OTUB1-208ENST00000536943 PHRF1Q9P1Y6 1649 aaKnown RBP22.99■■□□□ 1.27
OTUB1-208ENST00000536943 USP6P35125 1406 aa22.99■■□□□ 1.27
OTUB1-208ENST00000536943 EVA1CP58658 441 aa22.98■■□□□ 1.27
OTUB1-208ENST00000536943 NLRP6P59044 892 aa22.98■■□□□ 1.27
OTUB1-208ENST00000536943 STRN4Q9NRL3 753 aa22.97■■□□□ 1.27
OTUB1-208ENST00000536943 SBNO2Q9Y2G9 1366 aa22.97■■□□□ 1.27
OTUB1-208ENST00000536943 NRAPQ86VF7 1730 aa22.96■■□□□ 1.27
OTUB1-208ENST00000536943 ONECUT3O60422 494 aaPredicted RBP22.96■■□□□ 1.27
OTUB1-208ENST00000536943 FAM98CQ17RN3 349 aaKnown RBP22.96■■□□□ 1.27
OTUB1-208ENST00000536943 USP19O94966 1318 aa22.95■■□□□ 1.26
OTUB1-208ENST00000536943 GCP02774 474 aa22.95■■□□□ 1.26
OTUB1-208ENST00000536943 KRT27Q7Z3Y8 459 aa22.95■■□□□ 1.26
OTUB1-208ENST00000536943 PCGF6Q9BYE7 350 aa22.95■■□□□ 1.26
OTUB1-208ENST00000536943 SPATA31A5Q5VU36 1347 aa22.94■■□□□ 1.26
OTUB1-208ENST00000536943 SPATA31A7Q8IWB4 1347 aa22.94■■□□□ 1.26
OTUB1-208ENST00000536943 ZBTB7CA1YPR0 619 aa22.94■■□□□ 1.26
OTUB1-208ENST00000536943 SF3B2Q13435 895 aaKnown RBP22.93■■□□□ 1.26
OTUB1-208ENST00000536943 TMC1Q8TDI8 760 aa22.93■■□□□ 1.26
OTUB1-208ENST00000536943 SLC24A1O60721 1099 aa22.92■■□□□ 1.26
OTUB1-208ENST00000536943 CPDO75976 1380 aa22.91■■□□□ 1.26
OTUB1-208ENST00000536943 KTN1Q86UP2 1357 aaKnown RBP22.91■■□□□ 1.26
OTUB1-208ENST00000536943 NRKQ7Z2Y5 1582 aa22.91■■□□□ 1.26
OTUB1-208ENST00000536943 TTC21BQ7Z4L5 1316 aa22.9■■□□□ 1.26
OTUB1-208ENST00000536943 TTC21AQ8NDW8 1320 aa22.9■■□□□ 1.26
OTUB1-208ENST00000536943 BRWD3Q6RI45 1802 aa22.9■■□□□ 1.26
OTUB1-208ENST00000536943 HDGFL2Q7Z4V5 671 aaPredicted RBP22.89■■□□□ 1.25
OTUB1-208ENST00000536943 USP35Q9P2H5 1018 aa22.89■■□□□ 1.25
OTUB1-208ENST00000536943 SPATA31A1Q5TZJ5 1347 aa22.88■■□□□ 1.25
OTUB1-208ENST00000536943 KCNH5Q8NCM2 988 aa22.87■■□□□ 1.25
OTUB1-208ENST00000536943 BLMP54132 1417 aaPredicted RBP22.87■■□□□ 1.25
OTUB1-208ENST00000536943 SSH2Q76I76 1423 aa22.86■■□□□ 1.25
OTUB1-208ENST00000536943 ST20-MTHFSA0A0A6YYL1 179 aa22.86■■□□□ 1.25
OTUB1-208ENST00000536943 TERF2IPQ9NYB0 399 aa22.86■■□□□ 1.25
OTUB1-208ENST00000536943 AKAP12Q02952 1782 aa22.86■■□□□ 1.25
OTUB1-208ENST00000536943 CLSPNQ9HAW4 1339 aa22.85■■□□□ 1.25
OTUB1-208ENST00000536943 CPSF1Q10570 1443 aaKnown RBP22.85■■□□□ 1.25
OTUB1-208ENST00000536943 PUS7Q96PZ0 661 aaKnown RBP22.85■■□□□ 1.25
OTUB1-208ENST00000536943 TIMELESSQ9UNS1 1208 aa22.85■■□□□ 1.25
OTUB1-208ENST00000536943 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.84■■□□□ 1.25
OTUB1-208ENST00000536943 SOX12O15370 315 aa22.83■■□□□ 1.25
OTUB1-208ENST00000536943 LARP1Q6PKG0 1096 aaKnown RBP22.83■■□□□ 1.25
OTUB1-208ENST00000536943 PIK3C2AO00443 1686 aa22.83■■□□□ 1.24
OTUB1-208ENST00000536943 CAMTA1Q9Y6Y1 1673 aa22.83■■□□□ 1.24
OTUB1-208ENST00000536943 SLIT3O75094 1523 aa22.82■■□□□ 1.24
OTUB1-208ENST00000536943 TCP11L2Q8N4U5 519 aa22.82■■□□□ 1.24
OTUB1-208ENST00000536943 SLC12A5Q9H2X9 1139 aa22.82■■□□□ 1.24
OTUB1-208ENST00000536943 AATKQ6ZMQ8 1374 aa22.81■■□□□ 1.24
OTUB1-208ENST00000536943 ZRANB1Q9UGI0 708 aa22.81■■□□□ 1.24
OTUB1-208ENST00000536943 BARGINQ6ZT62 677 aa22.8■■□□□ 1.24
OTUB1-208ENST00000536943 THRAP3Q9Y2W1 955 aaKnown RBP22.8■■□□□ 1.24
OTUB1-208ENST00000536943 EP400Q96L91 3159 aa22.79■■□□□ 1.24
OTUB1-208ENST00000536943 LMO7Q8WWI1 1683 aa22.79■■□□□ 1.24
OTUB1-208ENST00000536943 PDE3BQ13370 1112 aa22.79■■□□□ 1.24
OTUB1-208ENST00000536943 TESK2Q96S53 571 aa22.79■■□□□ 1.24
OTUB1-208ENST00000536943 TMF1P82094 1093 aa22.78■■□□□ 1.24
OTUB1-208ENST00000536943 MON2Q7Z3U7 1717 aa22.78■■□□□ 1.24
OTUB1-208ENST00000536943 COL5A2P05997 1499 aaPredicted RBP22.78■■□□□ 1.24
OTUB1-208ENST00000536943 THSD7AQ9UPZ6 1657 aa22.77■■□□□ 1.24
OTUB1-208ENST00000536943 USP47Q96K76 1375 aa22.77■■□□□ 1.24
OTUB1-208ENST00000536943 NINLQ9Y2I6 1382 aa22.77■■□□□ 1.24
OTUB1-208ENST00000536943 BAG6P46379 1132 aa22.77■■□□□ 1.24
OTUB1-208ENST00000536943 FAM182BQ5T319 152 aa22.77■■□□□ 1.24
OTUB1-208ENST00000536943 TOM1L2Q6ZVM7 507 aa22.77■■□□□ 1.24
OTUB1-208ENST00000536943 CCER1Q8TC90 406 aaPredicted RBP22.77■■□□□ 1.24
OTUB1-208ENST00000536943 EDC4Q6P2E9 1401 aaKnown RBP22.76■■□□□ 1.23
OTUB1-208ENST00000536943 CSB-PGBD3P0DP91 1061 aa22.76■■□□□ 1.23
OTUB1-208ENST00000536943 ARHGEF25Q86VW2 580 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms