RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 APAF1O14727 1248 aa19.63■□□□□ 0.73
CHFR-213ENST00000536843 VGFO15240 615 aaPredicted RBP19.63■□□□□ 0.73
CHFR-213ENST00000536843 IDI1Q13907 227 aa19.63■□□□□ 0.73
CHFR-213ENST00000536843 PANK1Q8TE04 598 aa19.63■□□□□ 0.73
CHFR-213ENST00000536843 PPP1R9BQ96SB3 815 aa19.63■□□□□ 0.73
CHFR-213ENST00000536843 NSD3Q9BZ95 1437 aa19.63■□□□□ 0.73
CHFR-213ENST00000536843 CCDC173Q0VFZ6 552 aa19.62■□□□□ 0.73
CHFR-213ENST00000536843 C22orf23Q9BZE7 217 aa19.62■□□□□ 0.73
CHFR-213ENST00000536843 PDZRN3Q9UPQ7 1066 aa19.62■□□□□ 0.73
CHFR-213ENST00000536843 PLEKHG5O94827 1062 aa19.62■□□□□ 0.73
CHFR-213ENST00000536843 QRICH2Q9H0J4 1663 aa19.61■□□□□ 0.73
CHFR-213ENST00000536843 ARHGEF40Q8TER5 1519 aa19.61■□□□□ 0.73
CHFR-213ENST00000536843 ZSCAN30Q86W11 494 aa19.61■□□□□ 0.73
CHFR-213ENST00000536843 PIK3C2BO00750 1634 aa19.61■□□□□ 0.73
CHFR-213ENST00000536843 SKOR2Q2VWA4 1001 aaPredicted RBP19.61■□□□□ 0.73
CHFR-213ENST00000536843 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.61■□□□□ 0.73
CHFR-213ENST00000536843 ARHGAP31Q2M1Z3 1444 aa19.6■□□□□ 0.73
CHFR-213ENST00000536843 ZC3H13Q5T200 1668 aaKnown RBP19.6■□□□□ 0.73
CHFR-213ENST00000536843 RIPK4P57078 832 aa19.6■□□□□ 0.73
CHFR-213ENST00000536843 MORC1Q86VD1 984 aa19.6■□□□□ 0.73
CHFR-213ENST00000536843 PTMSP20962 102 aa19.6■□□□□ 0.73
CHFR-213ENST00000536843 NEXMIFQ5QGS0 1516 aa19.59■□□□□ 0.73
CHFR-213ENST00000536843 CANXP27824 592 aaKnown RBP19.59■□□□□ 0.73
CHFR-213ENST00000536843 TNNT2P45379 298 aaPredicted RBP19.59■□□□□ 0.73
CHFR-213ENST00000536843 HSCBQ8IWL3 235 aa19.59■□□□□ 0.73
CHFR-213ENST00000536843 SENP3Q9H4L4 574 aaPredicted RBP19.59■□□□□ 0.73
CHFR-213ENST00000536843 PCDHB15Q9Y5E8 787 aa19.59■□□□□ 0.73
CHFR-213ENST00000536843 CIZ1Q9ULV3 898 aaPredicted RBP19.58■□□□□ 0.72
CHFR-213ENST00000536843 POLR3AO14802 1390 aaPredicted RBP19.57■□□□□ 0.72
CHFR-213ENST00000536843 PPP6R1Q9UPN7 881 aa19.57■□□□□ 0.72
CHFR-213ENST00000536843 GBP4Q96PP9 640 aa19.56■□□□□ 0.72
CHFR-213ENST00000536843 SLC52A1Q9NWF4 448 aa19.56■□□□□ 0.72
CHFR-213ENST00000536843 RWDD1Q9H446 243 aaPredicted RBP19.55■□□□□ 0.72
CHFR-213ENST00000536843 DMRT2Q9Y5R5 561 aa19.55■□□□□ 0.72
CHFR-213ENST00000536843 EVC2Q86UK5 1308 aa19.55■□□□□ 0.72
CHFR-213ENST00000536843 TNPO1Q92973 898 aaKnown RBP19.55■□□□□ 0.72
CHFR-213ENST00000536843 RBM10P98175 930 aaKnown RBP19.54■□□□□ 0.72
CHFR-213ENST00000536843 SAFB2Q14151 953 aaKnown RBP eCLIP19.54■□□□□ 0.72
CHFR-213ENST00000536843 SMC5Q8IY18 1101 aa19.54■□□□□ 0.72
CHFR-213ENST00000536843 SNX21Q969T3 373 aa19.53■□□□□ 0.72
CHFR-213ENST00000536843 CABP2Q9NPB3 220 aa19.53■□□□□ 0.72
CHFR-213ENST00000536843 STK26Q9P289 416 aa19.53■□□□□ 0.72
CHFR-213ENST00000536843 IBTKQ9P2D0 1353 aaPredicted RBP19.53■□□□□ 0.72
CHFR-213ENST00000536843 SMAP1Q8IYB5 467 aaPredicted RBP19.53■□□□□ 0.72
CHFR-213ENST00000536843 MFAP1P55081 439 aaKnown RBP19.52■□□□□ 0.72
CHFR-213ENST00000536843 RAB3GAP1Q15042 981 aa19.52■□□□□ 0.72
CHFR-213ENST00000536843 PUS7Q96PZ0 661 aaKnown RBP19.52■□□□□ 0.72
CHFR-213ENST00000536843 TULP4Q9NRJ4 1543 aa19.52■□□□□ 0.72
CHFR-213ENST00000536843 MSNP26038 577 aaKnown RBP19.52■□□□□ 0.71
CHFR-213ENST00000536843 NASPP49321 788 aaPredicted RBP19.51■□□□□ 0.71
CHFR-213ENST00000536843 FBXO31Q5XUX0 539 aaPredicted RBP19.51■□□□□ 0.71
CHFR-213ENST00000536843 ARHGEF28Q8N1W1 1705 aaKnown RBP19.51■□□□□ 0.71
CHFR-213ENST00000536843 HS1BP3Q53T59 392 aa19.51■□□□□ 0.71
CHFR-213ENST00000536843 MTERF4Q7Z6M4 381 aaKnown RBP19.51■□□□□ 0.71
CHFR-213ENST00000536843 ZFYVE9O95405 1425 aa19.5■□□□□ 0.71
CHFR-213ENST00000536843 RARSP54136 660 aaKnown RBP19.5■□□□□ 0.71
CHFR-213ENST00000536843 ANP32BQ92688 251 aaKnown RBP19.5■□□□□ 0.71
CHFR-213ENST00000536843 RLBP1P12271 317 aa19.49■□□□□ 0.71
CHFR-213ENST00000536843 MTHFSP49914 203 aa19.49■□□□□ 0.71
CHFR-213ENST00000536843 RBM25P49756 843 aaKnown RBP19.48■□□□□ 0.71
CHFR-213ENST00000536843 ANKRD36BQ8N2N9 1353 aa19.48■□□□□ 0.71
CHFR-213ENST00000536843 WWC1Q8IX03 1113 aa19.47■□□□□ 0.71
CHFR-213ENST00000536843 FAM13BQ9NYF5 915 aa19.47■□□□□ 0.71
CHFR-213ENST00000536843 PREX1Q8TCU6 1659 aa19.47■□□□□ 0.71
CHFR-213ENST00000536843 ZNF500O60304 480 aaPredicted RBP19.46■□□□□ 0.71
CHFR-213ENST00000536843 TMEM131LA2VDJ0 1609 aa19.46■□□□□ 0.71
CHFR-213ENST00000536843 USP32Q8NFA0 1604 aa19.46■□□□□ 0.71
CHFR-213ENST00000536843 MYO5BQ9ULV0 1848 aa19.46■□□□□ 0.71
CHFR-213ENST00000536843 SHPRHQ149N8 1683 aa19.45■□□□□ 0.7
CHFR-213ENST00000536843 RUNDC1Q96C34 613 aa19.45■□□□□ 0.7
CHFR-213ENST00000536843 RRP7AQ9Y3A4 280 aaKnown RBP19.45■□□□□ 0.7
CHFR-213ENST00000536843 NEUROD2Q15784 382 aa19.45■□□□□ 0.7
CHFR-213ENST00000536843 SRPK2P78362 688 aaKnown RBP19.44■□□□□ 0.7
CHFR-213ENST00000536843 R3HCC1Q9Y3T6 440 aaKnown RBP19.44■□□□□ 0.7
CHFR-213ENST00000536843 CLEC17AQ6ZS10 378 aa19.44■□□□□ 0.7
CHFR-213ENST00000536843 CFAP53Q96M91 514 aa19.43■□□□□ 0.7
CHFR-213ENST00000536843 NOL7Q9UMY1 257 aaKnown RBP19.43■□□□□ 0.7
CHFR-213ENST00000536843 MINK1Q8N4C8 1332 aaPredicted RBP19.43■□□□□ 0.7
CHFR-213ENST00000536843 DYNC1I1O14576 645 aa19.43■□□□□ 0.7
CHFR-213ENST00000536843 MLECQ14165 292 aa19.43■□□□□ 0.7
CHFR-213ENST00000536843 TCP11L2Q8N4U5 519 aa19.43■□□□□ 0.7
CHFR-213ENST00000536843 PRAM1Q96QH2 718 aa19.43■□□□□ 0.7
CHFR-213ENST00000536843 KLHL40Q2TBA0 621 aa19.42■□□□□ 0.7
CHFR-213ENST00000536843 TNNQ9UQP3 1299 aa19.42■□□□□ 0.7
CHFR-213ENST00000536843 CLTCQ00610 1675 aaKnown RBP19.41■□□□□ 0.7
CHFR-213ENST00000536843 NSD2O96028 1365 aa19.41■□□□□ 0.7
CHFR-213ENST00000536843 UQCRHLA0A096LP55 91 aa19.41■□□□□ 0.7
CHFR-213ENST00000536843 UQCRHP07919 91 aa19.41■□□□□ 0.7
CHFR-213ENST00000536843 PTPRMP28827 1452 aa19.41■□□□□ 0.7
CHFR-213ENST00000536843 HSP90AB1P08238 724 aaKnown RBP19.41■□□□□ 0.7
CHFR-213ENST00000536843 STAG3Q9UJ98 1225 aa19.41■□□□□ 0.7
CHFR-213ENST00000536843 A0A1W2PP64 1363 aa19.4■□□□□ 0.7
CHFR-213ENST00000536843 MVPQ14764 893 aaKnown RBP19.4■□□□□ 0.7
CHFR-213ENST00000536843 YTHDC2Q9H6S0 1430 aaKnown RBP19.4■□□□□ 0.7
CHFR-213ENST00000536843 ZNF445P59923 1031 aa19.4■□□□□ 0.7
CHFR-213ENST00000536843 GOLGA6L22H0YM25 854 aa19.39■□□□□ 0.69
CHFR-213ENST00000536843 PDLIM2Q96JY6 352 aa19.39■□□□□ 0.69
CHFR-213ENST00000536843 ESF1Q9H501 851 aaKnown RBP19.39■□□□□ 0.69
CHFR-213ENST00000536843 HDAC1Q13547 482 aaPredicted RBP19.39■□□□□ 0.69
CHFR-213ENST00000536843 UTP14CQ5TAP6 766 aaKnown RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms