RNA–Protein interactions for RNA: ENST00000536521.5

PTPN6-208, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 2

Gene PTPN6, Length 513 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-208ENST00000536521 ATP7BP35670 1465 aa15.24■□□□□ 0.03
PTPN6-208ENST00000536521 BRD4O60885 1362 aaPredicted RBP15.24■□□□□ 0.03
PTPN6-208ENST00000536521 HDGFL2Q7Z4V5 671 aaPredicted RBP15.23■□□□□ 0.03
PTPN6-208ENST00000536521 FNBP4Q8N3X1 1017 aaPredicted RBP15.23■□□□□ 0.03
PTPN6-208ENST00000536521 TERF2IPQ9NYB0 399 aa15.23■□□□□ 0.03
PTPN6-208ENST00000536521 LRP6O75581 1613 aa15.23■□□□□ 0.03
PTPN6-208ENST00000536521 RGPD8O14715 1765 aaPredicted RBP15.23■□□□□ 0.03
PTPN6-208ENST00000536521 NUTM2GQ5VZR2 741 aa15.22■□□□□ 0.03
PTPN6-208ENST00000536521 TRPC5Q9UL62 973 aaPredicted RBP15.22■□□□□ 0.03
PTPN6-208ENST00000536521 USP47Q96K76 1375 aa15.22■□□□□ 0.03
PTPN6-208ENST00000536521 USP32Q8NFA0 1604 aa15.21■□□□□ 0.03
PTPN6-208ENST00000536521 SOCS7O14512 581 aa15.21■□□□□ 0.03
PTPN6-208ENST00000536521 EIF4G2P78344 907 aaKnown RBP eCLIP15.21■□□□□ 0.03
PTPN6-208ENST00000536521 TESK2Q96S53 571 aa15.21■□□□□ 0.03
PTPN6-208ENST00000536521 NLRP6P59044 892 aa15.2■□□□□ 0.02
PTPN6-208ENST00000536521 RBM6P78332 1123 aaKnown RBP15.2■□□□□ 0.02
PTPN6-208ENST00000536521 SLC12A5Q9H2X9 1139 aa15.2■□□□□ 0.02
PTPN6-208ENST00000536521 QRICH2Q9H0J4 1663 aa15.19■□□□□ 0.02
PTPN6-208ENST00000536521 FAM83GA6ND36 823 aa15.19■□□□□ 0.02
PTPN6-208ENST00000536521 UNC5CLQ8IV45 518 aa15.19■□□□□ 0.02
PTPN6-208ENST00000536521 KTN1Q86UP2 1357 aaKnown RBP15.18■□□□□ 0.02
PTPN6-208ENST00000536521 PRDM11Q9NQV5 511 aa15.17■□□□□ 0.02
PTPN6-208ENST00000536521 CCDC9Q9Y3X0 531 aaKnown RBP15.17■□□□□ 0.02
PTPN6-208ENST00000536521 ITSN1Q15811 1721 aa15.17■□□□□ 0.02
PTPN6-208ENST00000536521 TTC21BQ7Z4L5 1316 aa15.17■□□□□ 0.02
PTPN6-208ENST00000536521 GCP02774 474 aa15.16■□□□□ 0.02
PTPN6-208ENST00000536521 ZC3H6P61129 1189 aaKnown RBP15.16■□□□□ 0.02
PTPN6-208ENST00000536521 TTC21AQ8NDW8 1320 aa15.16■□□□□ 0.02
PTPN6-208ENST00000536521 COL22A1Q8NFW1 1626 aaPredicted RBP15.15■□□□□ 0.02
PTPN6-208ENST00000536521 EVA1CP58658 441 aa15.15■□□□□ 0.02
PTPN6-208ENST00000536521 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.15■□□□□ 0.02
PTPN6-208ENST00000536521 KCNH5Q8NCM2 988 aa15.14■□□□□ 0.01
PTPN6-208ENST00000536521 GJD4Q96KN9 370 aaPredicted RBP15.14■□□□□ 0.01
PTPN6-208ENST00000536521 BTG4Q9NY30 223 aa15.14■□□□□ 0.01
PTPN6-208ENST00000536521 USP6P35125 1406 aa15.14■□□□□ 0.01
PTPN6-208ENST00000536521 NINLQ9Y2I6 1382 aa15.13■□□□□ 0.01
PTPN6-208ENST00000536521 POLR3GLQ9BT43 218 aa15.13■□□□□ 0.01
PTPN6-208ENST00000536521 ZBTB7CA1YPR0 619 aa15.12■□□□□ 0.01
PTPN6-208ENST00000536521 HSPA5P11021 654 aaKnown RBP15.12■□□□□ 0.01
PTPN6-208ENST00000536521 CPSF1Q10570 1443 aaKnown RBP15.11■□□□□ 0.01
PTPN6-208ENST00000536521 VPS72Q15906 364 aa15.11■□□□□ 0.01
PTPN6-208ENST00000536521 CHRNA2Q15822 529 aa15.1■□□□□ 0.01
PTPN6-208ENST00000536521 KIAA0232Q92628 1395 aa15.1■□□□□ 0.01
PTPN6-208ENST00000536521 BCL9LQ86UU0 1499 aa15.09■□□□□ 0.01
PTPN6-208ENST00000536521 SOX12O15370 315 aa15.08■□□□□ 0
PTPN6-208ENST00000536521 STRN4Q9NRL3 753 aa15.08■□□□□ 0
PTPN6-208ENST00000536521 TOPAZ1Q8N9V7 1692 aa15.08■□□□□ 0
PTPN6-208ENST00000536521 USP19O94966 1318 aa15.08■□□□□ 0
PTPN6-208ENST00000536521 TRPM3Q9HCF6 1732 aaPredicted RBP15.08■□□□□ 0
PTPN6-208ENST00000536521 SSH2Q76I76 1423 aa15.08■□□□□ 0
PTPN6-208ENST00000536521 COG3Q96JB2 828 aa15.07■□□□□ 0
PTPN6-208ENST00000536521 SLIT2O94813 1529 aa15.07■□□□□ 0
PTPN6-208ENST00000536521 A0A0G2JS52 829 aa15.06■□□□□ 0
PTPN6-208ENST00000536521 MYT1Q01538 1121 aa15.06■□□□□ 0
PTPN6-208ENST00000536521 NME9Q86XW9 330 aa15.06■□□□□ 0
PTPN6-208ENST00000536521 ATRNO75882 1429 aa15.06■□□□□ 0
PTPN6-208ENST00000536521 ALS2Q96Q42 1657 aa15.06■□□□□ 0
PTPN6-208ENST00000536521 CPDO75976 1380 aa15.05■□□□□ -0
PTPN6-208ENST00000536521 EDC4Q6P2E9 1401 aaKnown RBP15.05■□□□□ -0
PTPN6-208ENST00000536521 CDK12Q9NYV4 1490 aaPredicted RBP15.04■□□□□ -0
PTPN6-208ENST00000536521 A0A1W2PP64 1363 aa15.04■□□□□ -0
PTPN6-208ENST00000536521 ANKRD36BQ8N2N9 1353 aa15.04■□□□□ -0
PTPN6-208ENST00000536521 ONECUT3O60422 494 aaPredicted RBP15.03■□□□□ -0
PTPN6-208ENST00000536521 ARHGEF25Q86VW2 580 aa15.03■□□□□ -0
PTPN6-208ENST00000536521 SEPT12Q8IYM1 358 aa15.03■□□□□ -0
PTPN6-208ENST00000536521 ZRANB1Q9UGI0 708 aa15.03■□□□□ -0
PTPN6-208ENST00000536521 USP31Q70CQ4 1352 aa15.02■□□□□ -0
PTPN6-208ENST00000536521 AATKQ6ZMQ8 1374 aa15.01□□□□□ -0.01
PTPN6-208ENST00000536521 SPATA31A5Q5VU36 1347 aa15.01□□□□□ -0.01
PTPN6-208ENST00000536521 SPATA31A7Q8IWB4 1347 aa15.01□□□□□ -0.01
PTPN6-208ENST00000536521 FYB1O15117 783 aa15.01□□□□□ -0.01
PTPN6-208ENST00000536521 CSB-PGBD3P0DP91 1061 aa15.01□□□□□ -0.01
PTPN6-208ENST00000536521 FAM98CQ17RN3 349 aaKnown RBP15.01□□□□□ -0.01
PTPN6-208ENST00000536521 USP35Q9P2H5 1018 aa15.01□□□□□ -0.01
PTPN6-208ENST00000536521 CD163L1Q9NR16 1453 aa15.01□□□□□ -0.01
PTPN6-208ENST00000536521 TOM1L2Q6ZVM7 507 aa15□□□□□ -0.01
PTPN6-208ENST00000536521 MARF1Q9Y4F3 1742 aaKnown RBP15□□□□□ -0.01
PTPN6-208ENST00000536521 COL14A1Q05707 1796 aaKnown RBP14.99□□□□□ -0.01
PTPN6-208ENST00000536521 LARP1Q6PKG0 1096 aaKnown RBP14.99□□□□□ -0.01
PTPN6-208ENST00000536521 THRAP3Q9Y2W1 955 aaKnown RBP14.99□□□□□ -0.01
PTPN6-208ENST00000536521 CGNL1Q0VF96 1302 aa14.98□□□□□ -0.01
PTPN6-208ENST00000536521 SPATA31A1Q5TZJ5 1347 aa14.98□□□□□ -0.01
PTPN6-208ENST00000536521 TCP11L2Q8N4U5 519 aa14.98□□□□□ -0.01
PTPN6-208ENST00000536521 CARD14Q9BXL6 1004 aa14.98□□□□□ -0.01
PTPN6-208ENST00000536521 GGNBP2Q9H3C7 697 aa14.98□□□□□ -0.01
PTPN6-208ENST00000536521 PANK3Q9H999 370 aa14.98□□□□□ -0.01
PTPN6-208ENST00000536521 AXIN2Q9Y2T1 843 aa14.98□□□□□ -0.01
PTPN6-208ENST00000536521 AMPHP49418 695 aa14.97□□□□□ -0.01
PTPN6-208ENST00000536521 KRT27Q7Z3Y8 459 aa14.97□□□□□ -0.01
PTPN6-208ENST00000536521 RGS12O14924 1447 aa14.96□□□□□ -0.01
PTPN6-208ENST00000536521 PDE3BQ13370 1112 aa14.96□□□□□ -0.01
PTPN6-208ENST00000536521 BARGINQ6ZT62 677 aa14.96□□□□□ -0.01
PTPN6-208ENST00000536521 CCDC125Q86Z20 511 aa14.96□□□□□ -0.01
PTPN6-208ENST00000536521 UPF1Q92900 1129 aaKnown RBP eCLIP14.96□□□□□ -0.01
PTPN6-208ENST00000536521 KNSTRNQ9Y448 316 aa14.96□□□□□ -0.01
PTPN6-208ENST00000536521 AKAP12Q02952 1782 aa14.96□□□□□ -0.02
PTPN6-208ENST00000536521 C11orf95C9JLR9 678 aaPredicted RBP14.95□□□□□ -0.02
PTPN6-208ENST00000536521 IP6K1Q92551 441 aa14.95□□□□□ -0.02
PTPN6-208ENST00000536521 NWD2Q9ULI1 1742 aa14.95□□□□□ -0.02
PTPN6-208ENST00000536521 SLIT3O75094 1523 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms