RNA–Protein interactions for RNA: ENST00000536393.5

USP30-208, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 5

Gene USP30, Length 476 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-208ENST00000536393 ALDH1L2Q3SY69 923 aa8.45□□□□□ -1.06
USP30-208ENST00000536393 SP7Q8TDD2 431 aaPredicted RBP8.45□□□□□ -1.06
USP30-208ENST00000536393 CLTCQ00610 1675 aaKnown RBP8.45□□□□□ -1.06
USP30-208ENST00000536393 NOS1P29475 1434 aa8.45□□□□□ -1.06
USP30-208ENST00000536393 ABCC3O15438 1527 aa8.44□□□□□ -1.06
USP30-208ENST00000536393 KIDINS220Q9ULH0 1771 aa8.44□□□□□ -1.06
USP30-208ENST00000536393 VGFO15240 615 aaPredicted RBP8.44□□□□□ -1.06
USP30-208ENST00000536393 ZKSCAN2Q63HK3 967 aa8.44□□□□□ -1.06
USP30-208ENST00000536393 SNX21Q969T3 373 aa8.44□□□□□ -1.06
USP30-208ENST00000536393 SLC52A1Q9NWF4 448 aa8.44□□□□□ -1.06
USP30-208ENST00000536393 CHMP5Q9NZZ3 219 aa8.44□□□□□ -1.06
USP30-208ENST00000536393 IBTKQ9P2D0 1353 aaPredicted RBP8.44□□□□□ -1.06
USP30-208ENST00000536393 NSD3Q9BZ95 1437 aa8.44□□□□□ -1.06
USP30-208ENST00000536393 PLIN1O60240 522 aa8.43□□□□□ -1.06
USP30-208ENST00000536393 MVPQ14764 893 aaKnown RBP8.43□□□□□ -1.06
USP30-208ENST00000536393 CHADLQ6NUI6 762 aa8.43□□□□□ -1.06
USP30-208ENST00000536393 MORC1Q86VD1 984 aa8.43□□□□□ -1.06
USP30-208ENST00000536393 ARHGAP45Q92619 1136 aa8.43□□□□□ -1.06
USP30-208ENST00000536393 LAS1LQ9Y4W2 734 aaKnown RBP8.43□□□□□ -1.06
USP30-208ENST00000536393 POGZQ7Z3K3 1410 aa8.42□□□□□ -1.06
USP30-208ENST00000536393 ARHGEF28Q8N1W1 1705 aaKnown RBP8.41□□□□□ -1.06
USP30-208ENST00000536393 GLI2P10070 1586 aa8.41□□□□□ -1.06
USP30-208ENST00000536393 ARHGEF40Q8TER5 1519 aa8.41□□□□□ -1.06
USP30-208ENST00000536393 DLC1Q96QB1 1528 aa8.41□□□□□ -1.06
USP30-208ENST00000536393 NCOA3Q9Y6Q9 1424 aa8.41□□□□□ -1.06
USP30-208ENST00000536393 PNPLA6Q8IY17 1366 aa8.41□□□□□ -1.06
USP30-208ENST00000536393 USP19O94966 1318 aa8.41□□□□□ -1.06
USP30-208ENST00000536393 MRE11P49959 708 aa8.41□□□□□ -1.06
USP30-208ENST00000536393 C20orf194Q5TEA3 1177 aa8.41□□□□□ -1.06
USP30-208ENST00000536393 SMC5Q8IY18 1101 aa8.41□□□□□ -1.06
USP30-208ENST00000536393 ANTXR1Q9H6X2 564 aa8.41□□□□□ -1.06
USP30-208ENST00000536393 NPATQ14207 1427 aa8.4□□□□□ -1.06
USP30-208ENST00000536393 RBM25P49756 843 aaKnown RBP8.4□□□□□ -1.06
USP30-208ENST00000536393 GLIPR1L2Q4G1C9 344 aa8.4□□□□□ -1.06
USP30-208ENST00000536393 CLEC17AQ6ZS10 378 aa8.4□□□□□ -1.06
USP30-208ENST00000536393 DZIP1LQ8IYY4 767 aaKnown RBP8.4□□□□□ -1.06
USP30-208ENST00000536393 FRAT1Q92837 279 aaPredicted RBP8.4□□□□□ -1.06
USP30-208ENST00000536393 GCC1Q96CN9 775 aa8.4□□□□□ -1.06
USP30-208ENST00000536393 MROH2AA6NES4 1674 aa8.4□□□□□ -1.07
USP30-208ENST00000536393 NEXMIFQ5QGS0 1516 aa8.39□□□□□ -1.07
USP30-208ENST00000536393 PIK3R4Q99570 1358 aa8.39□□□□□ -1.07
USP30-208ENST00000536393 FSD2A1L4K1 749 aa8.39□□□□□ -1.07
USP30-208ENST00000536393 KIF3BO15066 747 aa8.39□□□□□ -1.07
USP30-208ENST00000536393 LMOD3Q0VAK6 560 aa8.39□□□□□ -1.07
USP30-208ENST00000536393 FTSJ3Q8IY81 847 aaKnown RBP8.39□□□□□ -1.07
USP30-208ENST00000536393 TCP11L2Q8N4U5 519 aa8.39□□□□□ -1.07
USP30-208ENST00000536393 GBP4Q96PP9 640 aa8.39□□□□□ -1.07
USP30-208ENST00000536393 TERF2IPQ9NYB0 399 aa8.39□□□□□ -1.07
USP30-208ENST00000536393 SALL2Q9Y467 1007 aaPredicted RBP8.39□□□□□ -1.07
USP30-208ENST00000536393 CAMSAP1Q5T5Y3 1602 aa8.39□□□□□ -1.07
USP30-208ENST00000536393 ATP7BP35670 1465 aa8.38□□□□□ -1.07
USP30-208ENST00000536393 GOLGA6L3A6NEY3 463 aa8.38□□□□□ -1.07
USP30-208ENST00000536393 EPB41L2O43491 1005 aaKnown RBP8.38□□□□□ -1.07
USP30-208ENST00000536393 TERF1P54274 439 aa8.38□□□□□ -1.07
USP30-208ENST00000536393 HSCBQ8IWL3 235 aa8.38□□□□□ -1.07
USP30-208ENST00000536393 CARD14Q9BXL6 1004 aa8.38□□□□□ -1.07
USP30-208ENST00000536393 GOLGA6L22H0YM25 854 aa8.37□□□□□ -1.07
USP30-208ENST00000536393 FCHSD2O94868 740 aa8.37□□□□□ -1.07
USP30-208ENST00000536393 CLCN1P35523 988 aa8.37□□□□□ -1.07
USP30-208ENST00000536393 RGS3P49796 1198 aa8.37□□□□□ -1.07
USP30-208ENST00000536393 HS1BP3Q53T59 392 aa8.37□□□□□ -1.07
USP30-208ENST00000536393 BMP2KLQ5H9B9 411 aa8.37□□□□□ -1.07
USP30-208ENST00000536393 ATF7IPQ6VMQ6 1270 aa8.37□□□□□ -1.07
USP30-208ENST00000536393 COL3A1P02461 1466 aaPredicted RBP8.37□□□□□ -1.07
USP30-208ENST00000536393 ADGRF5Q8IZF2 1346 aa8.36□□□□□ -1.07
USP30-208ENST00000536393 FRAT2O75474 233 aaPredicted RBP8.36□□□□□ -1.07
USP30-208ENST00000536393 BCAR3O75815 825 aa8.36□□□□□ -1.07
USP30-208ENST00000536393 IGHDP01880 384 aa8.36□□□□□ -1.07
USP30-208ENST00000536393 MCM4P33991 863 aa8.36□□□□□ -1.07
USP30-208ENST00000536393 CFAP70Q5T0N1 1121 aa8.36□□□□□ -1.07
USP30-208ENST00000536393 C22orf23Q9BZE7 217 aa8.36□□□□□ -1.07
USP30-208ENST00000536393 PTCH1Q13635 1447 aa8.36□□□□□ -1.07
USP30-208ENST00000536393 AATKQ6ZMQ8 1374 aa8.35□□□□□ -1.07
USP30-208ENST00000536393 AFAP1Q8N556 730 aa8.35□□□□□ -1.07
USP30-208ENST00000536393 PDZRN3Q9UPQ7 1066 aa8.35□□□□□ -1.07
USP30-208ENST00000536393 COG6Q9Y2V7 657 aa8.35□□□□□ -1.07
USP30-208ENST00000536393 ERCC6L2Q5T890 1561 aa8.35□□□□□ -1.07
USP30-208ENST00000536393 TULP4Q9NRJ4 1543 aa8.34□□□□□ -1.07
USP30-208ENST00000536393 C19orf67A6NJJ6 358 aa8.34□□□□□ -1.07
USP30-208ENST00000536393 CNGB1Q14028 1251 aaPredicted RBP8.34□□□□□ -1.07
USP30-208ENST00000536393 SIRT1Q96EB6 747 aa8.34□□□□□ -1.07
USP30-208ENST00000536393 TBC1D2Q9BYX2 928 aa8.34□□□□□ -1.07
USP30-208ENST00000536393 FARP1Q9Y4F1 1045 aaPredicted RBP8.34□□□□□ -1.07
USP30-208ENST00000536393 SOS1Q07889 1333 aaPredicted RBP8.33□□□□□ -1.08
USP30-208ENST00000536393 DDIT3P35638 169 aa8.33□□□□□ -1.08
USP30-208ENST00000536393 MTHFSP49914 203 aa8.33□□□□□ -1.08
USP30-208ENST00000536393 CPSF1Q10570 1443 aaKnown RBP8.33□□□□□ -1.08
USP30-208ENST00000536393 HDGFL2Q7Z4V5 671 aaPredicted RBP8.33□□□□□ -1.08
USP30-208ENST00000536393 ANP32BQ92688 251 aaKnown RBP8.33□□□□□ -1.08
USP30-208ENST00000536393 PLEKHF1Q96S99 279 aa8.33□□□□□ -1.08
USP30-208ENST00000536393 CWC22Q9HCG8 908 aaKnown RBP8.33□□□□□ -1.08
USP30-208ENST00000536393 ZBTB40Q9NUA8 1239 aa8.33□□□□□ -1.08
USP30-208ENST00000536393 KIF20BQ96Q89 1820 aa8.32□□□□□ -1.08
USP30-208ENST00000536393 TMPOP42166 694 aaKnown RBP8.32□□□□□ -1.08
USP30-208ENST00000536393 NUCB2P80303 420 aa8.32□□□□□ -1.08
USP30-208ENST00000536393 NUCB1Q02818 461 aa8.32□□□□□ -1.08
USP30-208ENST00000536393 CCDC146Q8IYE0 955 aa8.32□□□□□ -1.08
USP30-208ENST00000536393 PROM2Q8N271 834 aa8.32□□□□□ -1.08
USP30-208ENST00000536393 UBE2Q2Q8WVN8 375 aa8.32□□□□□ -1.08
USP30-208ENST00000536393 API5Q9BZZ5 524 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms