RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 TOPAZ1Q8N9V7 1692 aa20.49■□□□□ 0.87
RTN3P1-201ENST00000536295 CABP2Q9NPB3 220 aa20.49■□□□□ 0.87
RTN3P1-201ENST00000536295 TRPM1Q7Z4N2 1603 aa20.49■□□□□ 0.87
RTN3P1-201ENST00000536295 QRICH2Q9H0J4 1663 aa20.48■□□□□ 0.87
RTN3P1-201ENST00000536295 ROCK2O75116 1388 aaKnown RBP20.48■□□□□ 0.87
RTN3P1-201ENST00000536295 GLI3P10071 1580 aa20.48■□□□□ 0.87
RTN3P1-201ENST00000536295 NBPF8Q3BBV2 869 aa20.47■□□□□ 0.87
RTN3P1-201ENST00000536295 NUTM2GQ5VZR2 741 aa20.47■□□□□ 0.87
RTN3P1-201ENST00000536295 POLR3AO14802 1390 aaPredicted RBP20.46■□□□□ 0.87
RTN3P1-201ENST00000536295 PLEKHG3A1L390 1219 aa20.46■□□□□ 0.87
RTN3P1-201ENST00000536295 TRIM26Q12899 539 aaPredicted RBP20.46■□□□□ 0.87
RTN3P1-201ENST00000536295 VPS72Q15906 364 aa20.46■□□□□ 0.87
RTN3P1-201ENST00000536295 PPIP5K1Q6PFW1 1433 aa20.45■□□□□ 0.86
RTN3P1-201ENST00000536295 NWD2Q9ULI1 1742 aa20.45■□□□□ 0.86
RTN3P1-201ENST00000536295 BTG4Q9NY30 223 aa20.45■□□□□ 0.86
RTN3P1-201ENST00000536295 PRDM11Q9NQV5 511 aa20.43■□□□□ 0.86
RTN3P1-201ENST00000536295 CRYBG1Q9Y4K1 1723 aa20.43■□□□□ 0.86
RTN3P1-201ENST00000536295 COL14A1Q05707 1796 aaKnown RBP20.41■□□□□ 0.86
RTN3P1-201ENST00000536295 SEPT12Q8IYM1 358 aa20.41■□□□□ 0.86
RTN3P1-201ENST00000536295 ABTB2Q8N961 1025 aa20.41■□□□□ 0.86
RTN3P1-201ENST00000536295 EVC2Q86UK5 1308 aa20.41■□□□□ 0.86
RTN3P1-201ENST00000536295 TONSLQ96HA7 1378 aa20.41■□□□□ 0.86
RTN3P1-201ENST00000536295 A0A0G2JS52 829 aa20.4■□□□□ 0.86
RTN3P1-201ENST00000536295 MYT1Q01538 1121 aa20.4■□□□□ 0.86
RTN3P1-201ENST00000536295 CABP1Q9NZU7 370 aa20.4■□□□□ 0.86
RTN3P1-201ENST00000536295 NRAPQ86VF7 1730 aa20.39■□□□□ 0.86
RTN3P1-201ENST00000536295 KIAA0232Q92628 1395 aa20.39■□□□□ 0.85
RTN3P1-201ENST00000536295 ZC3H6P61129 1189 aaKnown RBP20.39■□□□□ 0.85
RTN3P1-201ENST00000536295 CHRNA2Q15822 529 aa20.39■□□□□ 0.85
RTN3P1-201ENST00000536295 PHRF1Q9P1Y6 1649 aaKnown RBP20.38■□□□□ 0.85
RTN3P1-201ENST00000536295 FAM98CQ17RN3 349 aaKnown RBP20.36■□□□□ 0.85
RTN3P1-201ENST00000536295 CARD11Q9BXL7 1154 aa20.36■□□□□ 0.85
RTN3P1-201ENST00000536295 BRWD3Q6RI45 1802 aa20.35■□□□□ 0.85
RTN3P1-201ENST00000536295 STRN4Q9NRL3 753 aa20.35■□□□□ 0.85
RTN3P1-201ENST00000536295 ONECUT3O60422 494 aaPredicted RBP20.34■□□□□ 0.85
RTN3P1-201ENST00000536295 USP6P35125 1406 aa20.34■□□□□ 0.85
RTN3P1-201ENST00000536295 KRT27Q7Z3Y8 459 aa20.33■□□□□ 0.85
RTN3P1-201ENST00000536295 NLRP13Q86W25 1043 aa20.33■□□□□ 0.85
RTN3P1-201ENST00000536295 NRKQ7Z2Y5 1582 aa20.33■□□□□ 0.84
RTN3P1-201ENST00000536295 USP19O94966 1318 aa20.32■□□□□ 0.84
RTN3P1-201ENST00000536295 SPATA31A5Q5VU36 1347 aa20.32■□□□□ 0.84
RTN3P1-201ENST00000536295 SPATA31A7Q8IWB4 1347 aa20.32■□□□□ 0.84
RTN3P1-201ENST00000536295 EP400Q96L91 3159 aa20.32■□□□□ 0.84
RTN3P1-201ENST00000536295 CCDC125Q86Z20 511 aa20.31■□□□□ 0.84
RTN3P1-201ENST00000536295 BRD4O60885 1362 aaPredicted RBP20.31■□□□□ 0.84
RTN3P1-201ENST00000536295 ZBTB7CA1YPR0 619 aa20.3■□□□□ 0.84
RTN3P1-201ENST00000536295 NLRP6P59044 892 aa20.3■□□□□ 0.84
RTN3P1-201ENST00000536295 GCP02774 474 aa20.29■□□□□ 0.84
RTN3P1-201ENST00000536295 EVA1CP58658 441 aa20.29■□□□□ 0.84
RTN3P1-201ENST00000536295 USP35Q9P2H5 1018 aa20.28■□□□□ 0.84
RTN3P1-201ENST00000536295 BLMP54132 1417 aaPredicted RBP20.27■□□□□ 0.84
RTN3P1-201ENST00000536295 CPDO75976 1380 aa20.27■□□□□ 0.84
RTN3P1-201ENST00000536295 SPATA31A1Q5TZJ5 1347 aa20.27■□□□□ 0.83
RTN3P1-201ENST00000536295 SF3B2Q13435 895 aaKnown RBP20.26■□□□□ 0.83
RTN3P1-201ENST00000536295 SSH2Q76I76 1423 aa20.26■□□□□ 0.83
RTN3P1-201ENST00000536295 SBNO2Q9Y2G9 1366 aa20.25■□□□□ 0.83
RTN3P1-201ENST00000536295 FAM182BQ5T319 152 aa20.25■□□□□ 0.83
RTN3P1-201ENST00000536295 ZNF692Q9BU19 519 aaPredicted RBP20.25■□□□□ 0.83
RTN3P1-201ENST00000536295 CAMTA1Q9Y6Y1 1673 aa20.25■□□□□ 0.83
RTN3P1-201ENST00000536295 TTC21BQ7Z4L5 1316 aa20.25■□□□□ 0.83
RTN3P1-201ENST00000536295 PIK3C2AO00443 1686 aa20.24■□□□□ 0.83
RTN3P1-201ENST00000536295 LARP1Q6PKG0 1096 aaKnown RBP20.24■□□□□ 0.83
RTN3P1-201ENST00000536295 DEFB132Q7Z7B7 95 aa20.24■□□□□ 0.83
RTN3P1-201ENST00000536295 KTN1Q86UP2 1357 aaKnown RBP20.23■□□□□ 0.83
RTN3P1-201ENST00000536295 LMO7Q8WWI1 1683 aa20.22■□□□□ 0.83
RTN3P1-201ENST00000536295 THSD7AQ9UPZ6 1657 aa20.22■□□□□ 0.83
RTN3P1-201ENST00000536295 AKAP12Q02952 1782 aa20.22■□□□□ 0.83
RTN3P1-201ENST00000536295 SOX12O15370 315 aa20.22■□□□□ 0.83
RTN3P1-201ENST00000536295 TMC1Q8TDI8 760 aa20.22■□□□□ 0.83
RTN3P1-201ENST00000536295 SLIT3O75094 1523 aa20.22■□□□□ 0.83
RTN3P1-201ENST00000536295 CPSF1Q10570 1443 aaKnown RBP20.21■□□□□ 0.83
RTN3P1-201ENST00000536295 ZRANB1Q9UGI0 708 aa20.2■□□□□ 0.82
RTN3P1-201ENST00000536295 TTC21AQ8NDW8 1320 aa20.2■□□□□ 0.82
RTN3P1-201ENST00000536295 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.19■□□□□ 0.82
RTN3P1-201ENST00000536295 COL5A2P05997 1499 aaPredicted RBP20.18■□□□□ 0.82
RTN3P1-201ENST00000536295 ST20-MTHFSA0A0A6YYL1 179 aa20.18■□□□□ 0.82
RTN3P1-201ENST00000536295 TCP11L2Q8N4U5 519 aa20.18■□□□□ 0.82
RTN3P1-201ENST00000536295 BARGINQ6ZT62 677 aa20.17■□□□□ 0.82
RTN3P1-201ENST00000536295 PCGF6Q9BYE7 350 aa20.17■□□□□ 0.82
RTN3P1-201ENST00000536295 SLC12A5Q9H2X9 1139 aa20.17■□□□□ 0.82
RTN3P1-201ENST00000536295 AATKQ6ZMQ8 1374 aa20.17■□□□□ 0.82
RTN3P1-201ENST00000536295 HDGFL2Q7Z4V5 671 aaPredicted RBP20.16■□□□□ 0.82
RTN3P1-201ENST00000536295 KCNH5Q8NCM2 988 aa20.16■□□□□ 0.82
RTN3P1-201ENST00000536295 MON2Q7Z3U7 1717 aa20.16■□□□□ 0.82
RTN3P1-201ENST00000536295 CD163L1Q9NR16 1453 aa20.15■□□□□ 0.82
RTN3P1-201ENST00000536295 BAG6P46379 1132 aa20.14■□□□□ 0.81
RTN3P1-201ENST00000536295 PDE3BQ13370 1112 aa20.14■□□□□ 0.81
RTN3P1-201ENST00000536295 NME9Q86XW9 330 aa20.14■□□□□ 0.81
RTN3P1-201ENST00000536295 TESK2Q96S53 571 aa20.14■□□□□ 0.81
RTN3P1-201ENST00000536295 AXIN2Q9Y2T1 843 aa20.14■□□□□ 0.81
RTN3P1-201ENST00000536295 CRB1P82279 1406 aa20.13■□□□□ 0.81
RTN3P1-201ENST00000536295 TOM1L2Q6ZVM7 507 aa20.13■□□□□ 0.81
RTN3P1-201ENST00000536295 ARHGEF25Q86VW2 580 aa20.13■□□□□ 0.81
RTN3P1-201ENST00000536295 THRAP3Q9Y2W1 955 aaKnown RBP20.13■□□□□ 0.81
RTN3P1-201ENST00000536295 TERF2IPQ9NYB0 399 aa20.12■□□□□ 0.81
RTN3P1-201ENST00000536295 FAM196AQ6ZSG2 479 aa20.11■□□□□ 0.81
RTN3P1-201ENST00000536295 COL18A1P39060 1754 aa20.11■□□□□ 0.81
RTN3P1-201ENST00000536295 RGPD1P0DJD0 1748 aa20.1■□□□□ 0.81
RTN3P1-201ENST00000536295 A0A1W2PP64 1363 aa20.1■□□□□ 0.81
RTN3P1-201ENST00000536295 TRIM37O94972 964 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 211.9 ms