RNA–Protein interactions for RNA: ENST00000536172.5

LMO3-213, Transcript of LIM domain only 3, humanhuman

TSL 3

Gene LMO3, Length 587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-213ENST00000536172 BTG4Q9NY30 223 aa16.25■□□□□ 0.19
LMO3-213ENST00000536172 ARHGEF28Q8N1W1 1705 aaKnown RBP16.25■□□□□ 0.19
LMO3-213ENST00000536172 A0A0G2JS52 829 aa16.24■□□□□ 0.19
LMO3-213ENST00000536172 BAG6P46379 1132 aa16.24■□□□□ 0.19
LMO3-213ENST00000536172 MYT1Q01538 1121 aa16.24■□□□□ 0.19
LMO3-213ENST00000536172 DEFB132Q7Z7B7 95 aa16.24■□□□□ 0.19
LMO3-213ENST00000536172 KDM2AQ9Y2K7 1162 aa16.24■□□□□ 0.19
LMO3-213ENST00000536172 PRR36Q9H6K5 1346 aa16.23■□□□□ 0.19
LMO3-213ENST00000536172 RGPD1P0DJD0 1748 aa16.23■□□□□ 0.19
LMO3-213ENST00000536172 LRP5O75197 1615 aa16.23■□□□□ 0.19
LMO3-213ENST00000536172 FAM98CQ17RN3 349 aaKnown RBP16.22■□□□□ 0.19
LMO3-213ENST00000536172 PAK3O75914 559 aaPredicted RBP16.21■□□□□ 0.19
LMO3-213ENST00000536172 ATP7BP35670 1465 aa16.21■□□□□ 0.19
LMO3-213ENST00000536172 SPATA31A5Q5VU36 1347 aa16.2■□□□□ 0.18
LMO3-213ENST00000536172 SPATA31A7Q8IWB4 1347 aa16.2■□□□□ 0.18
LMO3-213ENST00000536172 KIAA1210Q9ULL0 1709 aa16.2■□□□□ 0.18
LMO3-213ENST00000536172 PRDM11Q9NQV5 511 aa16.2■□□□□ 0.18
LMO3-213ENST00000536172 THSD7AQ9UPZ6 1657 aa16.2■□□□□ 0.18
LMO3-213ENST00000536172 ADRA2BP18089 450 aa16.19■□□□□ 0.18
LMO3-213ENST00000536172 NUDT16Q96DE0 195 aaKnown RBP16.18■□□□□ 0.18
LMO3-213ENST00000536172 PHRF1Q9P1Y6 1649 aaKnown RBP16.18■□□□□ 0.18
LMO3-213ENST00000536172 TOPAZ1Q8N9V7 1692 aa16.17■□□□□ 0.18
LMO3-213ENST00000536172 POLR3AO14802 1390 aaPredicted RBP16.16■□□□□ 0.18
LMO3-213ENST00000536172 DISP2A7MBM2 1401 aa16.16■□□□□ 0.18
LMO3-213ENST00000536172 CCDC61Q9Y6R9 512 aa16.15■□□□□ 0.18
LMO3-213ENST00000536172 SPATA31A1Q5TZJ5 1347 aa16.15■□□□□ 0.18
LMO3-213ENST00000536172 KIAA0232Q92628 1395 aa16.14■□□□□ 0.17
LMO3-213ENST00000536172 TNS1Q9HBL0 1735 aaKnown RBP16.14■□□□□ 0.17
LMO3-213ENST00000536172 CDK19Q9BWU1 502 aa16.14■□□□□ 0.17
LMO3-213ENST00000536172 PLEKHG3A1L390 1219 aa16.13■□□□□ 0.17
LMO3-213ENST00000536172 FAM196AQ6ZSG2 479 aa16.13■□□□□ 0.17
LMO3-213ENST00000536172 NBPF8Q3BBV2 869 aa16.12■□□□□ 0.17
LMO3-213ENST00000536172 ACEP12821 1306 aa16.12■□□□□ 0.17
LMO3-213ENST00000536172 EN1Q05925 392 aaPredicted RBP16.11■□□□□ 0.17
LMO3-213ENST00000536172 BARGINQ6ZT62 677 aa16.11■□□□□ 0.17
LMO3-213ENST00000536172 BRD4O60885 1362 aaPredicted RBP16.11■□□□□ 0.17
LMO3-213ENST00000536172 PARD3Q8TEW0 1356 aa16.11■□□□□ 0.17
LMO3-213ENST00000536172 EVA1CP58658 441 aa16.1■□□□□ 0.17
LMO3-213ENST00000536172 CPDO75976 1380 aa16.1■□□□□ 0.17
LMO3-213ENST00000536172 NRKQ7Z2Y5 1582 aa16.09■□□□□ 0.17
LMO3-213ENST00000536172 ZC3H6P61129 1189 aaKnown RBP16.09■□□□□ 0.17
LMO3-213ENST00000536172 CHRNA2Q15822 529 aa16.09■□□□□ 0.17
LMO3-213ENST00000536172 ABTB2Q8N961 1025 aa16.09■□□□□ 0.17
LMO3-213ENST00000536172 STRN4Q9NRL3 753 aa16.09■□□□□ 0.17
LMO3-213ENST00000536172 PSDA5PKW4 1024 aaPredicted RBP16.08■□□□□ 0.16
LMO3-213ENST00000536172 C11orf95C9JLR9 678 aaPredicted RBP16.08■□□□□ 0.16
LMO3-213ENST00000536172 FAM182BQ5T319 152 aa16.08■□□□□ 0.16
LMO3-213ENST00000536172 NLRP13Q86W25 1043 aa16.08■□□□□ 0.16
LMO3-213ENST00000536172 SSH2Q76I76 1423 aa16.08■□□□□ 0.16
LMO3-213ENST00000536172 LMO7Q8WWI1 1683 aa16.08■□□□□ 0.16
LMO3-213ENST00000536172 THRAP3Q9Y2W1 955 aaKnown RBP16.07■□□□□ 0.16
LMO3-213ENST00000536172 USP19O94966 1318 aa16.07■□□□□ 0.16
LMO3-213ENST00000536172 PDE3BQ13370 1112 aa16.06■□□□□ 0.16
LMO3-213ENST00000536172 NUTM2GQ5VZR2 741 aa16.06■□□□□ 0.16
LMO3-213ENST00000536172 CAMTA1Q9Y6Y1 1673 aa16.05■□□□□ 0.16
LMO3-213ENST00000536172 PPIP5K1Q6PFW1 1433 aa16.05■□□□□ 0.16
LMO3-213ENST00000536172 CENPJQ9HC77 1338 aaPredicted RBP16.05■□□□□ 0.16
LMO3-213ENST00000536172 TRIM37O94972 964 aa16.05■□□□□ 0.16
LMO3-213ENST00000536172 SRPK2P78362 688 aaKnown RBP16.05■□□□□ 0.16
LMO3-213ENST00000536172 TCP11L2Q8N4U5 519 aa16.05■□□□□ 0.16
LMO3-213ENST00000536172 CAMKK2Q96RR4 588 aa16.05■□□□□ 0.16
LMO3-213ENST00000536172 R3HDM1Q15032 1099 aaKnown RBP16.04■□□□□ 0.16
LMO3-213ENST00000536172 EZH2Q15910 746 aaKnown RBP16.04■□□□□ 0.16
LMO3-213ENST00000536172 USP35Q9P2H5 1018 aa16.04■□□□□ 0.16
LMO3-213ENST00000536172 PARP4Q9UKK3 1724 aaKnown RBP16.04■□□□□ 0.16
LMO3-213ENST00000536172 QRICH2Q9H0J4 1663 aa16.04■□□□□ 0.16
LMO3-213ENST00000536172 RREB1Q92766 1687 aa16.03■□□□□ 0.16
LMO3-213ENST00000536172 APBA3O96018 575 aa16.03■□□□□ 0.16
LMO3-213ENST00000536172 GCP02774 474 aa16.03■□□□□ 0.16
LMO3-213ENST00000536172 NBPF1Q3BBV0 1214 aa16.02■□□□□ 0.16
LMO3-213ENST00000536172 LARP1Q6PKG0 1096 aaKnown RBP16.02■□□□□ 0.16
LMO3-213ENST00000536172 COL5A2P05997 1499 aaPredicted RBP16.01■□□□□ 0.15
LMO3-213ENST00000536172 CRB1P82279 1406 aa16■□□□□ 0.15
LMO3-213ENST00000536172 NUP188Q5SRE5 1749 aa15.99■□□□□ 0.15
LMO3-213ENST00000536172 NBPF14Q5TI25 921 aa15.99■□□□□ 0.15
LMO3-213ENST00000536172 USP6P35125 1406 aa15.99■□□□□ 0.15
LMO3-213ENST00000536172 AATKQ6ZMQ8 1374 aa15.99■□□□□ 0.15
LMO3-213ENST00000536172 RGPD3A6NKT7 1758 aaPredicted RBP15.98■□□□□ 0.15
LMO3-213ENST00000536172 RGPD4Q7Z3J3 1758 aa15.98■□□□□ 0.15
LMO3-213ENST00000536172 CABP2Q9NPB3 220 aa15.98■□□□□ 0.15
LMO3-213ENST00000536172 SLIT3O75094 1523 aa15.98■□□□□ 0.15
LMO3-213ENST00000536172 EVC2Q86UK5 1308 aa15.97■□□□□ 0.15
LMO3-213ENST00000536172 NLRP6P59044 892 aa15.97■□□□□ 0.15
LMO3-213ENST00000536172 OVOS2A0A0G2JMS6 1433 aa15.96■□□□□ 0.15
LMO3-213ENST00000536172 OVOS2A0A0J9YW53 1432 aa15.96■□□□□ 0.15
LMO3-213ENST00000536172 OVOS2Q6IE36 1432 aa15.96■□□□□ 0.15
LMO3-213ENST00000536172 CABP1Q9NZU7 370 aa15.96■□□□□ 0.15
LMO3-213ENST00000536172 TRPM1Q7Z4N2 1603 aa15.96■□□□□ 0.15
LMO3-213ENST00000536172 SBF2Q86WG5 1849 aa15.96■□□□□ 0.14
LMO3-213ENST00000536172 PEAK1Q9H792 1746 aa15.95■□□□□ 0.14
LMO3-213ENST00000536172 ZNF692Q9BU19 519 aaPredicted RBP15.95■□□□□ 0.14
LMO3-213ENST00000536172 CDCA7Q9BWT1 371 aaPredicted RBP15.95■□□□□ 0.14
LMO3-213ENST00000536172 PIK3C2AO00443 1686 aa15.95■□□□□ 0.14
LMO3-213ENST00000536172 WNK3Q9BYP7 1800 aa15.94■□□□□ 0.14
LMO3-213ENST00000536172 COL18A1P39060 1754 aa15.94■□□□□ 0.14
LMO3-213ENST00000536172 AKAP12Q02952 1782 aa15.94■□□□□ 0.14
LMO3-213ENST00000536172 KCNH5Q8NCM2 988 aa15.93■□□□□ 0.14
LMO3-213ENST00000536172 LRRC37A3O60309 1634 aa15.93■□□□□ 0.14
LMO3-213ENST00000536172 PLSCR1O15162 318 aa15.92■□□□□ 0.14
LMO3-213ENST00000536172 DDB1Q16531 1140 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms