RNA–Protein interactions for RNA: ENST00000536089.5

MDM2-223, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-223ENST00000536089 FAM187AA6NFU0 413 aa7.47□□□□□ -1.21
MDM2-223ENST00000536089 SYMPKQ92797 1274 aaKnown RBP7.47□□□□□ -1.21
MDM2-223ENST00000536089 SOCS7O14512 581 aa7.46□□□□□ -1.22
MDM2-223ENST00000536089 PUS10Q3MIT2 529 aaKnown RBP7.46□□□□□ -1.22
MDM2-223ENST00000536089 CFAP99D6REC4 459 aa7.45□□□□□ -1.22
MDM2-223ENST00000536089 GDF9O60383 454 aa7.45□□□□□ -1.22
MDM2-223ENST00000536089 RPIAP49247 311 aa7.45□□□□□ -1.22
MDM2-223ENST00000536089 Q3C1V9 767 aa7.45□□□□□ -1.22
MDM2-223ENST00000536089 LIAT1Q6ZQX7 453 aa7.45□□□□□ -1.22
MDM2-223ENST00000536089 SCUBE3Q8IX30 993 aa7.45□□□□□ -1.22
MDM2-223ENST00000536089 PRR7Q8TB68 274 aa7.45□□□□□ -1.22
MDM2-223ENST00000536089 CALR3Q96L12 384 aaKnown RBP7.45□□□□□ -1.22
MDM2-223ENST00000536089 RB1CC1Q8TDY2 1594 aa7.45□□□□□ -1.22
MDM2-223ENST00000536089 CD2BP2O95400 341 aaKnown RBP7.44□□□□□ -1.22
MDM2-223ENST00000536089 LRRN4Q8WUT4 740 aa7.44□□□□□ -1.22
MDM2-223ENST00000536089 EMID1Q96A84 441 aaPredicted RBP7.44□□□□□ -1.22
MDM2-223ENST00000536089 SPSB2Q99619 263 aa7.44□□□□□ -1.22
MDM2-223ENST00000536089 PPEF1O14829 653 aaPredicted RBP7.43□□□□□ -1.22
MDM2-223ENST00000536089 MORN1Q5T089 497 aa7.43□□□□□ -1.22
MDM2-223ENST00000536089 RETREG3Q86VR2 466 aa7.43□□□□□ -1.22
MDM2-223ENST00000536089 HMX1Q9NP08 348 aaPredicted RBP7.43□□□□□ -1.22
MDM2-223ENST00000536089 SLC27A5Q9Y2P5 690 aa7.43□□□□□ -1.22
MDM2-223ENST00000536089 TNFRSF10AO00220 468 aa7.42□□□□□ -1.22
MDM2-223ENST00000536089 WASHC4Q2M389 1173 aa7.42□□□□□ -1.22
MDM2-223ENST00000536089 GJD4Q96KN9 370 aaPredicted RBP7.42□□□□□ -1.22
MDM2-223ENST00000536089 PNMA1Q8ND90 353 aa7.41□□□□□ -1.22
MDM2-223ENST00000536089 POM121CA8CG34 1229 aa7.4□□□□□ -1.22
MDM2-223ENST00000536089 CRIPAKQ8N1N5 446 aa7.4□□□□□ -1.22
MDM2-223ENST00000536089 GLMNQ92990 594 aa7.4□□□□□ -1.22
MDM2-223ENST00000536089 FMNL1O95466 1100 aaPredicted RBP7.39□□□□□ -1.23
MDM2-223ENST00000536089 PDIA4P13667 645 aaKnown RBP7.39□□□□□ -1.23
MDM2-223ENST00000536089 NR6A1Q15406 480 aa7.39□□□□□ -1.23
MDM2-223ENST00000536089 TRIM34Q9BYJ4 488 aa7.39□□□□□ -1.23
MDM2-223ENST00000536089 SALL2Q9Y467 1007 aaPredicted RBP7.39□□□□□ -1.23
MDM2-223ENST00000536089 VAC14Q08AM6 782 aa7.38□□□□□ -1.23
MDM2-223ENST00000536089 CTC1Q2NKJ3 1217 aa7.38□□□□□ -1.23
MDM2-223ENST00000536089 HDGFL1Q5TGJ6 251 aa7.38□□□□□ -1.23
MDM2-223ENST00000536089 RNF19BQ6ZMZ0 732 aa7.38□□□□□ -1.23
MDM2-223ENST00000536089 CYP4X1Q8N118 509 aa7.38□□□□□ -1.23
MDM2-223ENST00000536089 USB1Q9BQ65 265 aaKnown RBP7.38□□□□□ -1.23
MDM2-223ENST00000536089 AAASQ9NRG9 546 aa7.38□□□□□ -1.23
MDM2-223ENST00000536089 NACADO15069 1562 aa7.37□□□□□ -1.23
MDM2-223ENST00000536089 PER1O15534 1290 aaPredicted RBP7.37□□□□□ -1.23
MDM2-223ENST00000536089 ZBTB24O43167 697 aaPredicted RBP7.37□□□□□ -1.23
MDM2-223ENST00000536089 FOXC1Q12948 553 aa7.37□□□□□ -1.23
MDM2-223ENST00000536089 IRF5Q13568 498 aa7.37□□□□□ -1.23
MDM2-223ENST00000536089 EPS8L1Q8TE68 723 aa7.37□□□□□ -1.23
MDM2-223ENST00000536089 AVPP01185 164 aa7.36□□□□□ -1.23
MDM2-223ENST00000536089 PLA2G2CQ5R387 149 aa7.36□□□□□ -1.23
MDM2-223ENST00000536089 DESI1Q6ICB0 168 aa7.36□□□□□ -1.23
MDM2-223ENST00000536089 TREML4Q6UXN2 200 aa7.36□□□□□ -1.23
MDM2-223ENST00000536089 PKD2L1Q9P0L9 805 aa7.36□□□□□ -1.23
MDM2-223ENST00000536089 ACIN1Q9UKV3 1341 aaKnown RBP7.35□□□□□ -1.23
MDM2-223ENST00000536089 AXIN1O15169 862 aa7.35□□□□□ -1.23
MDM2-223ENST00000536089 SEMA3FQ13275 785 aa7.35□□□□□ -1.23
MDM2-223ENST00000536089 FCF1Q9Y324 198 aaKnown RBP7.35□□□□□ -1.23
MDM2-223ENST00000536089 CTHP32929 405 aa7.34□□□□□ -1.23
MDM2-223ENST00000536089 SMCPP49901 116 aaPredicted RBP7.34□□□□□ -1.23
MDM2-223ENST00000536089 BRICD5Q6PL45 260 aa7.34□□□□□ -1.23
MDM2-223ENST00000536089 LYPD8Q6UX82 237 aa7.34□□□□□ -1.23
MDM2-223ENST00000536089 TOR4AQ9NXH8 423 aa7.34□□□□□ -1.23
MDM2-223ENST00000536089 POTECB2RU33 542 aa7.33□□□□□ -1.24
MDM2-223ENST00000536089 ST8SIA5O15466 376 aa7.33□□□□□ -1.24
MDM2-223ENST00000536089 JUNDP17535 347 aa7.33□□□□□ -1.24
MDM2-223ENST00000536089 RFX1P22670 979 aa7.33□□□□□ -1.24
MDM2-223ENST00000536089 MSS51Q4VC12 460 aa7.33□□□□□ -1.24
MDM2-223ENST00000536089 THAP11Q96EK4 314 aa7.33□□□□□ -1.24
MDM2-223ENST00000536089 EIF4G2P78344 907 aaKnown RBP eCLIP7.32□□□□□ -1.24
MDM2-223ENST00000536089 TTC24A2A3L6 582 aaPredicted RBP7.31□□□□□ -1.24
MDM2-223ENST00000536089 SOX11P35716 441 aa7.31□□□□□ -1.24
MDM2-223ENST00000536089 PODXL2Q9NZ53 605 aa7.31□□□□□ -1.24
MDM2-223ENST00000536089 C11orf95C9JLR9 678 aaPredicted RBP7.3□□□□□ -1.24
MDM2-223ENST00000536089 PPP1R15AO75807 674 aaPredicted RBP7.3□□□□□ -1.24
MDM2-223ENST00000536089 PTPRNQ16849 979 aa7.3□□□□□ -1.24
MDM2-223ENST00000536089 FKBPLQ9UIM3 349 aa7.3□□□□□ -1.24
MDM2-223ENST00000536089 ZBTB7CA1YPR0 619 aa7.29□□□□□ -1.24
MDM2-223ENST00000536089 WNT7AO00755 349 aa7.29□□□□□ -1.24
MDM2-223ENST00000536089 WFS1O76024 890 aa7.29□□□□□ -1.24
MDM2-223ENST00000536089 TRIM26Q12899 539 aaPredicted RBP7.29□□□□□ -1.24
MDM2-223ENST00000536089 ADAMTS19Q8TE59 1207 aa7.29□□□□□ -1.24
MDM2-223ENST00000536089 MAP10Q9P2G4 905 aa7.29□□□□□ -1.24
MDM2-223ENST00000536089 GPR37L1O60883 481 aa7.28□□□□□ -1.24
MDM2-223ENST00000536089 CCNYL3P0C7X3 344 aa7.28□□□□□ -1.24
MDM2-223ENST00000536089 NR1H3Q13133 447 aa7.28□□□□□ -1.24
MDM2-223ENST00000536089 CCDC24Q8N4L8 307 aa7.28□□□□□ -1.24
MDM2-223ENST00000536089 FAM160A2Q8N612 972 aaPredicted RBP7.28□□□□□ -1.24
MDM2-223ENST00000536089 SNIP1Q8TAD8 396 aaKnown RBP7.28□□□□□ -1.24
MDM2-223ENST00000536089 NUDT12Q9BQG2 462 aa7.28□□□□□ -1.24
MDM2-223ENST00000536089 PPP1R12CQ9BZL4 782 aa7.28□□□□□ -1.24
MDM2-223ENST00000536089 ALG2Q9H553 416 aa7.28□□□□□ -1.24
MDM2-223ENST00000536089 SENP2Q9HC62 589 aa7.28□□□□□ -1.24
MDM2-223ENST00000536089 ZBBXA8MT70 800 aa7.27□□□□□ -1.25
MDM2-223ENST00000536089 LMOD1P29536 600 aaPredicted RBP7.27□□□□□ -1.25
MDM2-223ENST00000536089 INSM1Q01101 510 aaPredicted RBP7.27□□□□□ -1.25
MDM2-223ENST00000536089 ARMC2Q8NEN0 867 aa7.27□□□□□ -1.25
MDM2-223ENST00000536089 PALM3A6NDB9 673 aaPredicted RBP7.26□□□□□ -1.25
MDM2-223ENST00000536089 F12P00748 615 aaPredicted RBP7.26□□□□□ -1.25
MDM2-223ENST00000536089 PDE4CQ08493 712 aa7.26□□□□□ -1.25
MDM2-223ENST00000536089 LCE2AQ5TA79 106 aaPredicted RBP7.26□□□□□ -1.25
MDM2-223ENST00000536089 RETREG2Q8NC44 543 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms