RNA–Protein interactions for RNA: ENST00000535466.5

CD4-203, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-203ENST00000535466 EIF3AQ14152 1382 aaKnown RBP9.17□□□□□ -0.94
CD4-203ENST00000535466 AKAP12Q02952 1782 aa9.17□□□□□ -0.94
CD4-203ENST00000535466 PLEKHG3A1L390 1219 aa9.16□□□□□ -0.94
CD4-203ENST00000535466 FNBP4Q8N3X1 1017 aaPredicted RBP9.16□□□□□ -0.94
CD4-203ENST00000535466 USP6P35125 1406 aa9.15□□□□□ -0.94
CD4-203ENST00000535466 CPSF1Q10570 1443 aaKnown RBP9.15□□□□□ -0.94
CD4-203ENST00000535466 ACEP12821 1306 aa9.15□□□□□ -0.94
CD4-203ENST00000535466 PPP4R3CPQ6ZMV5 832 aa9.15□□□□□ -0.94
CD4-203ENST00000535466 SLIT3O75094 1523 aa9.15□□□□□ -0.95
CD4-203ENST00000535466 MON2Q7Z3U7 1717 aa9.14□□□□□ -0.95
CD4-203ENST00000535466 ARHGEF10O15013 1369 aa9.14□□□□□ -0.95
CD4-203ENST00000535466 LMO7Q8WWI1 1683 aa9.14□□□□□ -0.95
CD4-203ENST00000535466 USP19O94966 1318 aa9.14□□□□□ -0.95
CD4-203ENST00000535466 MEX3CQ5U5Q3 659 aaKnown RBP9.14□□□□□ -0.95
CD4-203ENST00000535466 CARD11Q9BXL7 1154 aa9.14□□□□□ -0.95
CD4-203ENST00000535466 CCDC61Q9Y6R9 512 aa9.14□□□□□ -0.95
CD4-203ENST00000535466 CDK12Q9NYV4 1490 aaPredicted RBP9.14□□□□□ -0.95
CD4-203ENST00000535466 NWD2Q9ULI1 1742 aa9.13□□□□□ -0.95
CD4-203ENST00000535466 FAM83GA6ND36 823 aa9.12□□□□□ -0.95
CD4-203ENST00000535466 PLEKHG5O94827 1062 aa9.12□□□□□ -0.95
CD4-203ENST00000535466 PSME1Q06323 249 aa9.12□□□□□ -0.95
CD4-203ENST00000535466 NCBP3Q53F19 620 aaKnown RBP9.12□□□□□ -0.95
CD4-203ENST00000535466 CABP1Q9NZU7 370 aa9.12□□□□□ -0.95
CD4-203ENST00000535466 MYOM1P52179 1685 aa9.12□□□□□ -0.95
CD4-203ENST00000535466 USP54Q70EL1 1684 aa9.12□□□□□ -0.95
CD4-203ENST00000535466 USP47Q96K76 1375 aa9.12□□□□□ -0.95
CD4-203ENST00000535466 NFAT5O94916 1531 aa9.11□□□□□ -0.95
CD4-203ENST00000535466 CLSPNQ9HAW4 1339 aa9.11□□□□□ -0.95
CD4-203ENST00000535466 ST20-MTHFSA0A0A6YYL1 179 aa9.11□□□□□ -0.95
CD4-203ENST00000535466 SRPK2P78362 688 aaKnown RBP9.11□□□□□ -0.95
CD4-203ENST00000535466 NUTM2GQ5VZR2 741 aa9.11□□□□□ -0.95
CD4-203ENST00000535466 ZNF772Q68DY9 489 aaPredicted RBP9.11□□□□□ -0.95
CD4-203ENST00000535466 NGDNQ8NEJ9 315 aaKnown RBP9.11□□□□□ -0.95
CD4-203ENST00000535466 USP21Q9UK80 565 aa9.11□□□□□ -0.95
CD4-203ENST00000535466 COL18A1P39060 1754 aa9.11□□□□□ -0.95
CD4-203ENST00000535466 COL14A1Q05707 1796 aaKnown RBP9.11□□□□□ -0.95
CD4-203ENST00000535466 KIAA0232Q92628 1395 aa9.11□□□□□ -0.95
CD4-203ENST00000535466 EVC2Q86UK5 1308 aa9.1□□□□□ -0.95
CD4-203ENST00000535466 NGLY1Q96IV0 654 aa9.1□□□□□ -0.95
CD4-203ENST00000535466 A0A1W2PP64 1363 aa9.1□□□□□ -0.95
CD4-203ENST00000535466 THSD7AQ9UPZ6 1657 aa9.1□□□□□ -0.95
CD4-203ENST00000535466 CAMTA1Q9Y6Y1 1673 aa9.1□□□□□ -0.95
CD4-203ENST00000535466 QTRT2Q9H974 415 aaKnown RBP9.09□□□□□ -0.95
CD4-203ENST00000535466 ZRANB1Q9UGI0 708 aa9.09□□□□□ -0.95
CD4-203ENST00000535466 BRWD3Q6RI45 1802 aa9.09□□□□□ -0.95
CD4-203ENST00000535466 ATAD2Q6PL18 1390 aa9.09□□□□□ -0.95
CD4-203ENST00000535466 OVOS2A0A0J9YW53 1432 aa9.08□□□□□ -0.96
CD4-203ENST00000535466 OVOS2Q6IE36 1432 aa9.08□□□□□ -0.96
CD4-203ENST00000535466 LMOD2Q6P5Q4 547 aa9.08□□□□□ -0.96
CD4-203ENST00000535466 UNC5CLQ8IV45 518 aa9.08□□□□□ -0.96
CD4-203ENST00000535466 CPDO75976 1380 aa9.08□□□□□ -0.96
CD4-203ENST00000535466 TTC21BQ7Z4L5 1316 aa9.07□□□□□ -0.96
CD4-203ENST00000535466 PAK3O75914 559 aaPredicted RBP9.07□□□□□ -0.96
CD4-203ENST00000535466 RXRBP28702 533 aa9.07□□□□□ -0.96
CD4-203ENST00000535466 RBM6P78332 1123 aaKnown RBP9.07□□□□□ -0.96
CD4-203ENST00000535466 CHRNA2Q15822 529 aa9.07□□□□□ -0.96
CD4-203ENST00000535466 SLC12A5Q9H2X9 1139 aa9.07□□□□□ -0.96
CD4-203ENST00000535466 TRPC5Q9UL62 973 aaPredicted RBP9.07□□□□□ -0.96
CD4-203ENST00000535466 GJD4Q96KN9 370 aaPredicted RBP9.06□□□□□ -0.96
CD4-203ENST00000535466 COL5A2P05997 1499 aaPredicted RBP9.06□□□□□ -0.96
CD4-203ENST00000535466 BRD4O60885 1362 aaPredicted RBP9.05□□□□□ -0.96
CD4-203ENST00000535466 USP31Q70CQ4 1352 aa9.05□□□□□ -0.96
CD4-203ENST00000535466 ZC3H6P61129 1189 aaKnown RBP9.05□□□□□ -0.96
CD4-203ENST00000535466 VPS72Q15906 364 aa9.05□□□□□ -0.96
CD4-203ENST00000535466 UPF1Q92900 1129 aaKnown RBP eCLIP9.05□□□□□ -0.96
CD4-203ENST00000535466 BTG4Q9NY30 223 aa9.05□□□□□ -0.96
CD4-203ENST00000535466 KTN1Q86UP2 1357 aaKnown RBP9.04□□□□□ -0.96
CD4-203ENST00000535466 NME9Q86XW9 330 aa9.04□□□□□ -0.96
CD4-203ENST00000535466 ABTB2Q8N961 1025 aa9.04□□□□□ -0.96
CD4-203ENST00000535466 TIMELESSQ9UNS1 1208 aa9.04□□□□□ -0.96
CD4-203ENST00000535466 EDC4Q6P2E9 1401 aaKnown RBP9.04□□□□□ -0.96
CD4-203ENST00000535466 RGPD5Q99666 1765 aa9.04□□□□□ -0.96
CD4-203ENST00000535466 SPATA31A5Q5VU36 1347 aa9.04□□□□□ -0.96
CD4-203ENST00000535466 SPATA31A7Q8IWB4 1347 aa9.04□□□□□ -0.96
CD4-203ENST00000535466 ONECUT3O60422 494 aaPredicted RBP9.03□□□□□ -0.96
CD4-203ENST00000535466 GCP02774 474 aa9.03□□□□□ -0.96
CD4-203ENST00000535466 CCER1Q8TC90 406 aaPredicted RBP9.03□□□□□ -0.96
CD4-203ENST00000535466 AXIN2Q9Y2T1 843 aa9.03□□□□□ -0.96
CD4-203ENST00000535466 WNK3Q9BYP7 1800 aa9.03□□□□□ -0.96
CD4-203ENST00000535466 ANKRD36BQ8N2N9 1353 aa9.02□□□□□ -0.97
CD4-203ENST00000535466 C11orf95C9JLR9 678 aaPredicted RBP9.02□□□□□ -0.97
CD4-203ENST00000535466 PUS7Q96PZ0 661 aaKnown RBP9.02□□□□□ -0.97
CD4-203ENST00000535466 PRDM11Q9NQV5 511 aa9.02□□□□□ -0.97
CD4-203ENST00000535466 SPATA31A1Q5TZJ5 1347 aa9.02□□□□□ -0.97
CD4-203ENST00000535466 LARP1Q6PKG0 1096 aaKnown RBP9.01□□□□□ -0.97
CD4-203ENST00000535466 ARHGEF25Q86VW2 580 aa9.01□□□□□ -0.97
CD4-203ENST00000535466 CARD14Q9BXL6 1004 aa9.01□□□□□ -0.97
CD4-203ENST00000535466 PEAK1Q9H792 1746 aa9.01□□□□□ -0.97
CD4-203ENST00000535466 LRRC37A3O60309 1634 aa9.01□□□□□ -0.97
CD4-203ENST00000535466 TTC21AQ8NDW8 1320 aa9.01□□□□□ -0.97
CD4-203ENST00000535466 ABCC6O95255 1503 aa9□□□□□ -0.97
CD4-203ENST00000535466 AATKQ6ZMQ8 1374 aa9□□□□□ -0.97
CD4-203ENST00000535466 DISP2A7MBM2 1401 aa9□□□□□ -0.97
CD4-203ENST00000535466 LTN1O94822 1766 aa9□□□□□ -0.97
CD4-203ENST00000535466 HSPA5P11021 654 aaKnown RBP9□□□□□ -0.97
CD4-203ENST00000535466 FBLN1P23142 703 aa9□□□□□ -0.97
CD4-203ENST00000535466 HAP1P54257 671 aaPredicted RBP9□□□□□ -0.97
CD4-203ENST00000535466 NLRP6P59044 892 aa9□□□□□ -0.97
CD4-203ENST00000535466 FAM98CQ17RN3 349 aaKnown RBP9□□□□□ -0.97
CD4-203ENST00000535466 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms