RNA–Protein interactions for RNA: ENST00000535222.5

CPSF7-214, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-214ENST00000535222 MTFR1LQ9H019 292 aa11.91□□□□□ -0.5
CPSF7-214ENST00000535222 CHIC2Q9UKJ5 165 aa11.91□□□□□ -0.5
CPSF7-214ENST00000535222 ATF5Q9Y2D1 282 aaPredicted RBP11.91□□□□□ -0.5
CPSF7-214ENST00000535222 COL14A1Q05707 1796 aaKnown RBP11.91□□□□□ -0.5
CPSF7-214ENST00000535222 KIF1AQ12756 1690 aa11.91□□□□□ -0.5
CPSF7-214ENST00000535222 NAIPQ13075 1403 aa11.9□□□□□ -0.5
CPSF7-214ENST00000535222 GPR162Q16538 588 aa11.9□□□□□ -0.5
CPSF7-214ENST00000535222 PROM2Q8N271 834 aa11.9□□□□□ -0.5
CPSF7-214ENST00000535222 PDE3BQ13370 1112 aa11.88□□□□□ -0.51
CPSF7-214ENST00000535222 KANK4Q5T7N3 995 aaPredicted RBP11.88□□□□□ -0.51
CPSF7-214ENST00000535222 ARXQ96QS3 562 aa11.88□□□□□ -0.51
CPSF7-214ENST00000535222 CAPN15O75808 1086 aa11.87□□□□□ -0.51
CPSF7-214ENST00000535222 APLP1P51693 650 aa11.87□□□□□ -0.51
CPSF7-214ENST00000535222 ZNF326Q5BKZ1 582 aaKnown RBP11.87□□□□□ -0.51
CPSF7-214ENST00000535222 TNS4Q8IZW8 715 aa11.86□□□□□ -0.51
CPSF7-214ENST00000535222 TECPR2O15040 1411 aa11.86□□□□□ -0.51
CPSF7-214ENST00000535222 NUTM2FA1L443 756 aa11.85□□□□□ -0.51
CPSF7-214ENST00000535222 VGFO15240 615 aaPredicted RBP11.85□□□□□ -0.51
CPSF7-214ENST00000535222 SLC15A2Q16348 729 aa11.85□□□□□ -0.51
CPSF7-214ENST00000535222 JMYQ8N9B5 988 aa11.85□□□□□ -0.51
CPSF7-214ENST00000535222 PHF8Q9UPP1 1060 aa11.85□□□□□ -0.51
CPSF7-214ENST00000535222 ATP10DQ9P241 1426 aa11.85□□□□□ -0.51
CPSF7-214ENST00000535222 NRXN1Q9ULB1 1477 aa11.84□□□□□ -0.51
CPSF7-214ENST00000535222 GPBP1L1Q9HC44 474 aaPredicted RBP11.84□□□□□ -0.51
CPSF7-214ENST00000535222 ADCY9O60503 1353 aa11.83□□□□□ -0.52
CPSF7-214ENST00000535222 GRIN3BO60391 1043 aa11.83□□□□□ -0.52
CPSF7-214ENST00000535222 FMN2Q9NZ56 1722 aa11.83□□□□□ -0.52
CPSF7-214ENST00000535222 BCL11BQ9C0K0 894 aaPredicted RBP11.82□□□□□ -0.52
CPSF7-214ENST00000535222 WAPLQ7Z5K2 1190 aa11.81□□□□□ -0.52
CPSF7-214ENST00000535222 LMOD2Q6P5Q4 547 aa11.8□□□□□ -0.52
CPSF7-214ENST00000535222 STK32BQ9NY57 414 aa11.8□□□□□ -0.52
CPSF7-214ENST00000535222 THRAP3Q9Y2W1 955 aaKnown RBP11.8□□□□□ -0.52
CPSF7-214ENST00000535222 PEAK1Q9H792 1746 aa11.8□□□□□ -0.52
CPSF7-214ENST00000535222 ABCC11Q96J66 1382 aa11.79□□□□□ -0.52
CPSF7-214ENST00000535222 PRDM11Q9NQV5 511 aa11.79□□□□□ -0.52
CPSF7-214ENST00000535222 RPGRIP1LQ68CZ1 1315 aa11.79□□□□□ -0.52
CPSF7-214ENST00000535222 AATKQ6ZMQ8 1374 aa11.79□□□□□ -0.52
CPSF7-214ENST00000535222 BCL9O00512 1426 aa11.78□□□□□ -0.52
CPSF7-214ENST00000535222 KIF3CO14782 793 aa11.78□□□□□ -0.52
CPSF7-214ENST00000535222 PLEKHG5O94827 1062 aa11.78□□□□□ -0.52
CPSF7-214ENST00000535222 TCP11L2Q8N4U5 519 aa11.78□□□□□ -0.52
CPSF7-214ENST00000535222 SIRT1Q96EB6 747 aa11.78□□□□□ -0.52
CPSF7-214ENST00000535222 DHX57Q6P158 1386 aaKnown RBP11.78□□□□□ -0.52
CPSF7-214ENST00000535222 YBX3P16989 372 aaKnown RBP eCLIP11.77□□□□□ -0.533e-7■■□□□ 12.8
CPSF7-214ENST00000535222 ALS2Q96Q42 1657 aa11.77□□□□□ -0.53
CPSF7-214ENST00000535222 CRYBG1Q9Y4K1 1723 aa11.77□□□□□ -0.53
CPSF7-214ENST00000535222 OVOS2A0A0G2JMS6 1433 aa11.77□□□□□ -0.53
CPSF7-214ENST00000535222 OVOS2A0A0J9YW53 1432 aa11.77□□□□□ -0.53
CPSF7-214ENST00000535222 OVOS2Q6IE36 1432 aa11.77□□□□□ -0.53
CPSF7-214ENST00000535222 SBF2Q86WG5 1849 aa11.76□□□□□ -0.53
CPSF7-214ENST00000535222 TXNRD1Q16881 649 aa11.76□□□□□ -0.53
CPSF7-214ENST00000535222 PTF1AQ7RTS3 328 aa11.76□□□□□ -0.53
CPSF7-214ENST00000535222 KLRG1Q96E93 195 aa11.76□□□□□ -0.53
CPSF7-214ENST00000535222 TRPM3Q9HCF6 1732 aaPredicted RBP11.76□□□□□ -0.53
CPSF7-214ENST00000535222 NUP155O75694 1391 aa11.76□□□□□ -0.53
CPSF7-214ENST00000535222 PLEKHH1Q9ULM0 1364 aa11.76□□□□□ -0.53
CPSF7-214ENST00000535222 SSH2Q76I76 1423 aa11.75□□□□□ -0.53
CPSF7-214ENST00000535222 COL24A1Q17RW2 1714 aa11.74□□□□□ -0.53
CPSF7-214ENST00000535222 PARP4Q9UKK3 1724 aaKnown RBP11.74□□□□□ -0.53
CPSF7-214ENST00000535222 STRN4Q9NRL3 753 aa11.74□□□□□ -0.53
CPSF7-214ENST00000535222 KIAA0232Q92628 1395 aa11.74□□□□□ -0.53
CPSF7-214ENST00000535222 ATP7BP35670 1465 aa11.74□□□□□ -0.53
CPSF7-214ENST00000535222 RGPD8O14715 1765 aaPredicted RBP11.74□□□□□ -0.53
CPSF7-214ENST00000535222 NLGN2Q8NFZ4 835 aa11.73□□□□□ -0.53
CPSF7-214ENST00000535222 SLC16A10Q8TF71 515 aa11.73□□□□□ -0.53
CPSF7-214ENST00000535222 USP35Q9P2H5 1018 aa11.73□□□□□ -0.53
CPSF7-214ENST00000535222 WWC3Q9ULE0 1092 aa11.72□□□□□ -0.53
CPSF7-214ENST00000535222 CLTCL1P53675 1640 aa11.71□□□□□ -0.53
CPSF7-214ENST00000535222 TOMM70O94826 608 aa11.71□□□□□ -0.53
CPSF7-214ENST00000535222 CHRNA2Q15822 529 aa11.71□□□□□ -0.53
CPSF7-214ENST00000535222 LARP1Q6PKG0 1096 aaKnown RBP11.71□□□□□ -0.53
CPSF7-214ENST00000535222 ANKARQ7Z5J8 1434 aa11.7□□□□□ -0.54
CPSF7-214ENST00000535222 VPS8Q8N3P4 1428 aa11.7□□□□□ -0.54
CPSF7-214ENST00000535222 PELP1Q8IZL8 1130 aaKnown RBP11.7□□□□□ -0.54
CPSF7-214ENST00000535222 KNDC1Q76NI1 1749 aa11.69□□□□□ -0.54
CPSF7-214ENST00000535222 ACIN1Q9UKV3 1341 aaKnown RBP11.69□□□□□ -0.54
CPSF7-214ENST00000535222 EVA1CP58658 441 aa11.69□□□□□ -0.54
CPSF7-214ENST00000535222 PMFBP1Q8TBY8 1022 aa11.69□□□□□ -0.54
CPSF7-214ENST00000535222 GPRASP1Q5JY77 1395 aa11.68□□□□□ -0.54
CPSF7-214ENST00000535222 STK26Q9P289 416 aa11.68□□□□□ -0.54
CPSF7-214ENST00000535222 PAPPAQ13219 1627 aa11.68□□□□□ -0.54
CPSF7-214ENST00000535222 ROCK1Q13464 1354 aa11.67□□□□□ -0.54
CPSF7-214ENST00000535222 KIF1BO60333 1816 aa11.67□□□□□ -0.54
CPSF7-214ENST00000535222 POLD1P28340 1107 aa11.67□□□□□ -0.54
CPSF7-214ENST00000535222 IFT172Q9UG01 1749 aa11.66□□□□□ -0.54
CPSF7-214ENST00000535222 MARCH10Q8NA82 808 aaPredicted RBP11.66□□□□□ -0.54
CPSF7-214ENST00000535222 ZNF526Q8TF50 670 aaPredicted RBP11.66□□□□□ -0.54
CPSF7-214ENST00000535222 WDR90Q96KV7 1748 aa11.66□□□□□ -0.54
CPSF7-214ENST00000535222 CPDO75976 1380 aa11.66□□□□□ -0.54
CPSF7-214ENST00000535222 DDB1Q16531 1140 aa11.65□□□□□ -0.54
CPSF7-214ENST00000535222 LMO7Q8WWI1 1683 aa11.65□□□□□ -0.55
CPSF7-214ENST00000535222 PPLO60437 1756 aa11.64□□□□□ -0.55
CPSF7-214ENST00000535222 ZC3H6P61129 1189 aaKnown RBP11.64□□□□□ -0.55
CPSF7-214ENST00000535222 ADGRF5Q8IZF2 1346 aa11.63□□□□□ -0.55
CPSF7-214ENST00000535222 YTHDC2Q9H6S0 1430 aaKnown RBP11.63□□□□□ -0.55
CPSF7-214ENST00000535222 ZNF827Q17R98 1081 aa11.63□□□□□ -0.55
CPSF7-214ENST00000535222 AKT1S1Q96B36 256 aa11.63□□□□□ -0.55
CPSF7-214ENST00000535222 PHRF1Q9P1Y6 1649 aaKnown RBP11.63□□□□□ -0.55
CPSF7-214ENST00000535222 CRB1P82279 1406 aa11.62□□□□□ -0.55
CPSF7-214ENST00000535222 TMEM132EQ6IEE7 984 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms