RNA–Protein interactions for RNA: ENST00000534625.1

ATM-224, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-224ENST00000534625 GRIN2AQ12879 1464 aa9.1□□□□□ -0.95
ATM-224ENST00000534625 GRIPAP1Q4V328 841 aa9.1□□□□□ -0.95
ATM-224ENST00000534625 ADAMTS12P58397 1594 aa9.09□□□□□ -0.95
ATM-224ENST00000534625 FHAD1B1AJZ9 1412 aa9.09□□□□□ -0.95
ATM-224ENST00000534625 NUP160Q12769 1436 aa9.09□□□□□ -0.95
ATM-224ENST00000534625 AMHR2Q16671 573 aa9.09□□□□□ -0.95
ATM-224ENST00000534625 CTC1Q2NKJ3 1217 aa9.09□□□□□ -0.95
ATM-224ENST00000534625 HOXA2O43364 376 aa9.08□□□□□ -0.96
ATM-224ENST00000534625 SMCPP49901 116 aaPredicted RBP9.08□□□□□ -0.96
ATM-224ENST00000534625 NFX1Q12986 1120 aaKnown RBP9.08□□□□□ -0.96
ATM-224ENST00000534625 MSS51Q4VC12 460 aa9.08□□□□□ -0.96
ATM-224ENST00000534625 ERICH3Q5RHP9 1530 aa9.07□□□□□ -0.96
ATM-224ENST00000534625 USP46P62068 366 aa9.07□□□□□ -0.96
ATM-224ENST00000534625 CEP170Q5SW79 1584 aa9.07□□□□□ -0.96
ATM-224ENST00000534625 TTC24A2A3L6 582 aaPredicted RBP9.06□□□□□ -0.96
ATM-224ENST00000534625 SSTR3P32745 418 aaPredicted RBP9.06□□□□□ -0.96
ATM-224ENST00000534625 GUCA2AQ02747 115 aa9.06□□□□□ -0.96
ATM-224ENST00000534625 ERCC6L2Q5T890 1561 aa9.06□□□□□ -0.96
ATM-224ENST00000534625 Q3C1V9 767 aa9.05□□□□□ -0.96
ATM-224ENST00000534625 ZBTB24O43167 697 aaPredicted RBP9.04□□□□□ -0.96
ATM-224ENST00000534625 MMP16P51512 607 aa9.04□□□□□ -0.96
ATM-224ENST00000534625 TRIM66O15016 1216 aa9.03□□□□□ -0.96
ATM-224ENST00000534625 WIPF1O43516 503 aa9.03□□□□□ -0.96
ATM-224ENST00000534625 STK17AQ9UEE5 414 aa9.03□□□□□ -0.96
ATM-224ENST00000534625 SHROOM2Q13796 1616 aa9.02□□□□□ -0.96
ATM-224ENST00000534625 SNRPBP14678 240 aaKnown RBP9.02□□□□□ -0.97
ATM-224ENST00000534625 SMPD1P17405 629 aa9.02□□□□□ -0.97
ATM-224ENST00000534625 TTLL12Q14166 644 aaPredicted RBP9.02□□□□□ -0.97
ATM-224ENST00000534625 LCE2CQ5TA81 110 aa9.02□□□□□ -0.97
ATM-224ENST00000534625 GIGYF2Q6Y7W6 1299 aaKnown RBP9.02□□□□□ -0.97
ATM-224ENST00000534625 SYMPKQ92797 1274 aaKnown RBP9.02□□□□□ -0.97
ATM-224ENST00000534625 USB1Q9BQ65 265 aaKnown RBP9.02□□□□□ -0.97
ATM-224ENST00000534625 IGF1RP08069 1367 aa9.01□□□□□ -0.97
ATM-224ENST00000534625 NUTM1Q86Y26 1132 aa9.01□□□□□ -0.97
ATM-224ENST00000534625 PARP9Q8IXQ6 854 aa9.01□□□□□ -0.97
ATM-224ENST00000534625 SPIRE2Q8WWL2 714 aa9.01□□□□□ -0.97
ATM-224ENST00000534625 ATP13A2Q9NQ11 1180 aa9.01□□□□□ -0.97
ATM-224ENST00000534625 PCDHGC3Q9UN70 934 aa9.01□□□□□ -0.97
ATM-224ENST00000534625 PRG4Q92954 1404 aaPredicted RBP9□□□□□ -0.97
ATM-224ENST00000534625 DXOO77932 396 aaKnown RBP9□□□□□ -0.97
ATM-224ENST00000534625 INSM1Q01101 510 aaPredicted RBP9□□□□□ -0.97
ATM-224ENST00000534625 SNIP1Q8TAD8 396 aaKnown RBP9□□□□□ -0.97
ATM-224ENST00000534625 AK7Q96M32 723 aa9□□□□□ -0.97
ATM-224ENST00000534625 J3QL48 77 aa8.99□□□□□ -0.97
ATM-224ENST00000534625 WNT7AO00755 349 aa8.99□□□□□ -0.97
ATM-224ENST00000534625 KIF27Q86VH2 1401 aa8.98□□□□□ -0.97
ATM-224ENST00000534625 TERTO14746 1132 aaKnown RBP8.98□□□□□ -0.97
ATM-224ENST00000534625 NDUFV2P19404 249 aa8.98□□□□□ -0.97
ATM-224ENST00000534625 MRGPRX2Q96LB1 330 aa8.98□□□□□ -0.97
ATM-224ENST00000534625 MOXD2PA6NHM9 499 aa8.97□□□□□ -0.97
ATM-224ENST00000534625 FDX1P10109 184 aa8.97□□□□□ -0.97
ATM-224ENST00000534625 MS4A1P11836 297 aa8.97□□□□□ -0.97
ATM-224ENST00000534625 BEGAINQ9BUH8 593 aa8.97□□□□□ -0.97
ATM-224ENST00000534625 TRIM32Q13049 653 aa8.96□□□□□ -0.98
ATM-224ENST00000534625 SLC24A3Q9HC58 644 aa8.96□□□□□ -0.98
ATM-224ENST00000534625 RUSC2Q8N2Y8 1516 aa8.95□□□□□ -0.98
ATM-224ENST00000534625 RETREG3Q86VR2 466 aa8.95□□□□□ -0.98
ATM-224ENST00000534625 HPS1Q92902 700 aa8.95□□□□□ -0.98
ATM-224ENST00000534625 TRIM47Q96LD4 638 aa8.95□□□□□ -0.98
ATM-224ENST00000534625 JUNDP17535 347 aa8.94□□□□□ -0.98
ATM-224ENST00000534625 SENP2Q9HC62 589 aa8.94□□□□□ -0.98
ATM-224ENST00000534625 CARMIL1Q5VZK9 1371 aa8.94□□□□□ -0.98
ATM-224ENST00000534625 KIAA0586Q9BVV6 1533 aa8.94□□□□□ -0.98
ATM-224ENST00000534625 PDE4DQ08499 809 aa8.93□□□□□ -0.98
ATM-224ENST00000534625 TBC1D2Q9BYX2 928 aa8.93□□□□□ -0.98
ATM-224ENST00000534625 CUL7Q14999 1698 aa8.92□□□□□ -0.98
ATM-224ENST00000534625 C6orf229H3BNL8 230 aa8.91□□□□□ -0.98
ATM-224ENST00000534625 RSBN1LQ6PCB5 846 aaPredicted RBP8.9□□□□□ -0.98
ATM-224ENST00000534625 CCDC24Q8N4L8 307 aa8.9□□□□□ -0.98
ATM-224ENST00000534625 RC3H1Q5TC82 1133 aaKnown RBP8.89□□□□□ -0.99
ATM-224ENST00000534625 PTCRAQ6ISU1 281 aaPredicted RBP8.89□□□□□ -0.99
ATM-224ENST00000534625 PCDHB15Q9Y5E8 787 aa8.89□□□□□ -0.99
ATM-224ENST00000534625 SPTLC1O15269 473 aa8.88□□□□□ -0.99
ATM-224ENST00000534625 SLC24A1O60721 1099 aa8.88□□□□□ -0.99
ATM-224ENST00000534625 GJA5P36382 358 aa8.88□□□□□ -0.99
ATM-224ENST00000534625 SKOR1P84550 965 aa8.88□□□□□ -0.99
ATM-224ENST00000534625 KIFC2Q96AC6 838 aa8.88□□□□□ -0.99
ATM-224ENST00000534625 KIF13AQ9H1H9 1805 aa8.88□□□□□ -0.99
ATM-224ENST00000534625 ADCY10Q96PN6 1610 aa8.87□□□□□ -0.99
ATM-224ENST00000534625 FAM69CQ0P6D2 419 aa8.87□□□□□ -0.99
ATM-224ENST00000534625 NUDT12Q9BQG2 462 aa8.87□□□□□ -0.99
ATM-224ENST00000534625 ABCC10Q5T3U5 1492 aa8.87□□□□□ -0.99
ATM-224ENST00000534625 PTPRGP23470 1445 aa8.87□□□□□ -0.99
ATM-224ENST00000534625 MTMR2Q13614 643 aa8.86□□□□□ -0.99
ATM-224ENST00000534625 PRR7Q8TB68 274 aa8.86□□□□□ -0.99
ATM-224ENST00000534625 MAPKBP1O60336 1514 aa8.85□□□□□ -0.99
ATM-224ENST00000534625 DIXDC1Q155Q3 683 aa8.85□□□□□ -0.99
ATM-224ENST00000534625 BCANQ96GW7 911 aa8.85□□□□□ -0.99
ATM-224ENST00000534625 TNIKQ9UKE5 1360 aa8.85□□□□□ -0.99
ATM-224ENST00000534625 TTBK1Q5TCY1 1321 aaPredicted RBP8.84□□□□□ -0.99
ATM-224ENST00000534625 ALDH1A1P00352 501 aa8.84□□□□□ -0.99
ATM-224ENST00000534625 CARMIL2Q6F5E8 1435 aa8.84□□□□□ -0.99
ATM-224ENST00000534625 RIC3Q7Z5B4 369 aa8.84□□□□□ -0.99
ATM-224ENST00000534625 SLC16A10Q8TF71 515 aa8.84□□□□□ -0.99
ATM-224ENST00000534625 RAPGEF2Q9Y4G8 1499 aa8.83□□□□□ -1
ATM-224ENST00000534625 IQGAP2Q13576 1575 aa8.83□□□□□ -1
ATM-224ENST00000534625 SPDYE5A6NIY4 337 aa8.83□□□□□ -1
ATM-224ENST00000534625 CFAP99D6REC4 459 aa8.83□□□□□ -1
ATM-224ENST00000534625 CCNYL3P0C7X3 344 aa8.83□□□□□ -1
ATM-224ENST00000534625 HRCP23327 699 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms