RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	XPC	Q01831	940 aa	Predicted RBP	19.06	■□□□□ 0.64
NCAPD3-213	ENST00000534532	ERC1	Q8IUD2	1116 aa		19.06	■□□□□ 0.64
NCAPD3-213	ENST00000534532	BRMS1	Q9HCU9	246 aa		19.06	■□□□□ 0.64
NCAPD3-213	ENST00000534532	CCDC61	Q9Y6R9	512 aa		19.06	■□□□□ 0.64
NCAPD3-213	ENST00000534532	XBP1	P17861	261 aa		19.05	■□□□□ 0.64
NCAPD3-213	ENST00000534532	SYNJ1	O43426	1573 aa		19.05	■□□□□ 0.64
NCAPD3-213	ENST00000534532	ZC3H6	P61129	1189 aa	Known RBP	19.05	■□□□□ 0.64
NCAPD3-213	ENST00000534532	LNPK	Q9C0E8	428 aa		19.05	■□□□□ 0.64
NCAPD3-213	ENST00000534532	CNTROB	Q8N137	903 aa		19.05	■□□□□ 0.64
NCAPD3-213	ENST00000534532	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	19.04	■□□□□ 0.64
NCAPD3-213	ENST00000534532	FOXD4L3	Q6VB84	417 aa	Predicted RBP	19.04	■□□□□ 0.64
NCAPD3-213	ENST00000534532	RTN4	Q9NQC3	1192 aa	Known RBP	19.04	■□□□□ 0.64
NCAPD3-213	ENST00000534532	CCDC158	Q5M9N0	1113 aa		19.04	■□□□□ 0.64
NCAPD3-213	ENST00000534532	DNAJC5B	Q9UF47	199 aa		19.03	■□□□□ 0.64
NCAPD3-213	ENST00000534532	PDE4A	P27815	886 aa		19.03	■□□□□ 0.64
NCAPD3-213	ENST00000534532	NUDT16	Q96DE0	195 aa	Known RBP	19.03	■□□□□ 0.64
NCAPD3-213	ENST00000534532	R3HCC1	Q9Y3T6	440 aa	Known RBP	19.03	■□□□□ 0.64
NCAPD3-213	ENST00000534532	SMC3	Q9UQE7	1217 aa		19.02	■□□□□ 0.64
NCAPD3-213	ENST00000534532	DDX49	Q9Y6V7	483 aa	Known RBP	19.02	■□□□□ 0.64
NCAPD3-213	ENST00000534532	LAMC3	Q9Y6N6	1575 aa		19.02	■□□□□ 0.64
NCAPD3-213	ENST00000534532	MPHOSPH8	Q99549	860 aa		19.02	■□□□□ 0.63
NCAPD3-213	ENST00000534532	TOP2B	Q02880	1626 aa		19.02	■□□□□ 0.63
NCAPD3-213	ENST00000534532	PCMTD1	Q96MG8	357 aa	Predicted RBP	19.02	■□□□□ 0.63
NCAPD3-213	ENST00000534532	PRX	Q9BXM0	1461 aa		19.01	■□□□□ 0.63
NCAPD3-213	ENST00000534532	PSMA5	P28066	241 aa		19.01	■□□□□ 0.63
NCAPD3-213	ENST00000534532	DNAJC2	Q99543	621 aa	Known RBP	19.01	■□□□□ 0.63
NCAPD3-213	ENST00000534532	KRI1	Q8N9T8	703 aa	Known RBP	19.01	■□□□□ 0.63
NCAPD3-213	ENST00000534532	HIP1	O00291	1037 aa		19	■□□□□ 0.63
NCAPD3-213	ENST00000534532	SLC4A2	P04920	1241 aa		19	■□□□□ 0.63
NCAPD3-213	ENST00000534532	EXOSC9	Q06265	439 aa	Known RBP	19	■□□□□ 0.63
NCAPD3-213	ENST00000534532	TTC39A	Q5SRH9	613 aa		19	■□□□□ 0.63
NCAPD3-213	ENST00000534532	MTMR7	Q9Y216	660 aa		19	■□□□□ 0.63
NCAPD3-213	ENST00000534532	IPO7	O95373	1038 aa	Known RBP	19	■□□□□ 0.63
NCAPD3-213	ENST00000534532	SKOR2	Q2VWA4	1001 aa	Predicted RBP	19	■□□□□ 0.63
NCAPD3-213	ENST00000534532	GNAI2	P04899	355 aa		19	■□□□□ 0.63
NCAPD3-213	ENST00000534532	EPRS	P07814	1512 aa	Known RBP	19	■□□□□ 0.63
NCAPD3-213	ENST00000534532	BICD2	Q8TD16	824 aa		18.99	■□□□□ 0.63
NCAPD3-213	ENST00000534532	VPS37C	A5D8V6	355 aa	Predicted RBP	18.99	■□□□□ 0.63
NCAPD3-213	ENST00000534532	PANK1	Q8TE04	598 aa		18.99	■□□□□ 0.63
NCAPD3-213	ENST00000534532	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	18.99	■□□□□ 0.63	7e-7	■■■□□ 18.6
NCAPD3-213	ENST00000534532	DAPK1	P53355	1430 aa		18.99	■□□□□ 0.63
NCAPD3-213	ENST00000534532	SRCIN1	Q9C0H9	1055 aa		18.98	■□□□□ 0.63
NCAPD3-213	ENST00000534532	STARD3NL	O95772	234 aa		18.98	■□□□□ 0.63
NCAPD3-213	ENST00000534532	CCT4	P50991	539 aa	Known RBP	18.98	■□□□□ 0.63
NCAPD3-213	ENST00000534532	CCDC57	Q2TAC2	916 aa		18.98	■□□□□ 0.63
NCAPD3-213	ENST00000534532	CDC45	O75419	566 aa		18.97	■□□□□ 0.63
NCAPD3-213	ENST00000534532	MAGI1	Q96QZ7	1491 aa	Predicted RBP	18.97	■□□□□ 0.63
NCAPD3-213	ENST00000534532	MYL6B	P14649	208 aa		18.97	■□□□□ 0.63
NCAPD3-213	ENST00000534532	PPP6R1	Q9UPN7	881 aa		18.97	■□□□□ 0.63
NCAPD3-213	ENST00000534532	ADGRL1	O94910	1474 aa		18.97	■□□□□ 0.63
NCAPD3-213	ENST00000534532	BTBD11	A6QL63	1104 aa		18.96	■□□□□ 0.63
NCAPD3-213	ENST00000534532	GOLGA6L1	Q8N7Z2	621 aa		18.96	■□□□□ 0.63
NCAPD3-213	ENST00000534532	CCDC141	Q6ZP82	1450 aa		18.96	■□□□□ 0.63
NCAPD3-213	ENST00000534532	RRS1	Q15050	365 aa	Known RBP	18.96	■□□□□ 0.63
NCAPD3-213	ENST00000534532	ABCA10	Q8WWZ4	1543 aa		18.95	■□□□□ 0.62
NCAPD3-213	ENST00000534532	NGLY1	Q96IV0	654 aa		18.95	■□□□□ 0.62
NCAPD3-213	ENST00000534532	NACAP1	Q9BZK3	213 aa		18.95	■□□□□ 0.62
NCAPD3-213	ENST00000534532	AKNA	Q7Z591	1439 aa		18.94	■□□□□ 0.62
NCAPD3-213	ENST00000534532	ADAMTS2	O95450	1211 aa		18.94	■□□□□ 0.62
NCAPD3-213	ENST00000534532	RBM5	P52756	815 aa	Known RBP eCLIP	18.94	■□□□□ 0.62
NCAPD3-213	ENST00000534532	IQGAP2	Q13576	1575 aa		18.94	■□□□□ 0.62
NCAPD3-213	ENST00000534532	PHF8	Q9UPP1	1060 aa		18.94	■□□□□ 0.62
NCAPD3-213	ENST00000534532	DEK	P35659	375 aa	Known RBP	18.93	■□□□□ 0.62
NCAPD3-213	ENST00000534532	SLC4A3	P48751	1232 aa		18.93	■□□□□ 0.62
NCAPD3-213	ENST00000534532	CCDC73	Q6ZRK6	1079 aa		18.93	■□□□□ 0.62
NCAPD3-213	ENST00000534532	ZNF652	Q9Y2D9	606 aa		18.93	■□□□□ 0.62
NCAPD3-213	ENST00000534532	AMOTL2	Q9Y2J4	779 aa		18.93	■□□□□ 0.62
NCAPD3-213	ENST00000534532	ARHGEF11	O15085	1522 aa		18.93	■□□□□ 0.62
NCAPD3-213	ENST00000534532	TMOD3	Q9NYL9	352 aa		18.92	■□□□□ 0.62
NCAPD3-213	ENST00000534532	LRPPRC	P42704	1394 aa	Known RBP	18.92	■□□□□ 0.62
NCAPD3-213	ENST00000534532	BICDL1	Q6ZP65	573 aa		18.92	■□□□□ 0.62
NCAPD3-213	ENST00000534532	FCHSD2	O94868	740 aa		18.91	■□□□□ 0.62
NCAPD3-213	ENST00000534532	CEBPA	P49715	358 aa	Predicted RBP	18.91	■□□□□ 0.62
NCAPD3-213	ENST00000534532	RRP12	Q5JTH9	1297 aa	Known RBP	18.91	■□□□□ 0.62
NCAPD3-213	ENST00000534532	FOSB	P53539	338 aa		18.91	■□□□□ 0.62
NCAPD3-213	ENST00000534532	ZSCAN25	Q6NSZ9	544 aa		18.91	■□□□□ 0.62
NCAPD3-213	ENST00000534532	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	18.91	■□□□□ 0.62
NCAPD3-213	ENST00000534532	CT47B1	P0C2W7	299 aa	Predicted RBP	18.91	■□□□□ 0.62
NCAPD3-213	ENST00000534532	ATP2B2	Q01814	1243 aa		18.91	■□□□□ 0.62
NCAPD3-213	ENST00000534532	WAPL	Q7Z5K2	1190 aa		18.9	■□□□□ 0.62
NCAPD3-213	ENST00000534532	WWC2	Q6AWC2	1192 aa		18.9	■□□□□ 0.62
NCAPD3-213	ENST00000534532	DENND4B	O75064	1496 aa	Predicted RBP	18.9	■□□□□ 0.62
NCAPD3-213	ENST00000534532	ZPR1	O75312	459 aa		18.9	■□□□□ 0.62
NCAPD3-213	ENST00000534532	IGHMBP2	P38935	993 aa	Known RBP	18.9	■□□□□ 0.62
NCAPD3-213	ENST00000534532	NUCB2	P80303	420 aa		18.9	■□□□□ 0.62
NCAPD3-213	ENST00000534532	GNAT3	A8MTJ3	354 aa		18.9	■□□□□ 0.62
NCAPD3-213	ENST00000534532	CEP126	Q9P2H0	1117 aa		18.9	■□□□□ 0.62
NCAPD3-213	ENST00000534532	GRIN2A	Q12879	1464 aa		18.89	■□□□□ 0.62
NCAPD3-213	ENST00000534532	CCDC70	Q6NSX1	233 aa		18.89	■□□□□ 0.62
NCAPD3-213	ENST00000534532	FOXO3	O43524	673 aa		18.89	■□□□□ 0.61
NCAPD3-213	ENST00000534532	CDK13	Q14004	1512 aa	Known RBP	18.89	■□□□□ 0.61
NCAPD3-213	ENST00000534532	WDR63	Q8IWG1	891 aa		18.89	■□□□□ 0.61
NCAPD3-213	ENST00000534532	TSR2	Q969E8	191 aa	Known RBP	18.89	■□□□□ 0.61
NCAPD3-213	ENST00000534532	GCC1	Q96CN9	775 aa		18.89	■□□□□ 0.61
NCAPD3-213	ENST00000534532	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	18.88	■□□□□ 0.61
NCAPD3-213	ENST00000534532	SUPT6H	Q7KZ85	1726 aa	Known RBP	18.88	■□□□□ 0.61
NCAPD3-213	ENST00000534532	TMOD2	Q9NZR1	351 aa		18.88	■□□□□ 0.61
NCAPD3-213	ENST00000534532	TMEM132A	Q24JP5	1023 aa		18.87	■□□□□ 0.61
NCAPD3-213	ENST00000534532	AMOT	Q4VCS5	1084 aa		18.87	■□□□□ 0.61
NCAPD3-213	ENST00000534532	SIL1	Q9H173	461 aa		18.87	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms