RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 PLA2G2CQ5R387 149 aa13.02□□□□□ -0.33
CASP4-213ENST00000534356 UNC93B1Q9H1C4 597 aa13.02□□□□□ -0.33
CASP4-213ENST00000534356 FKBPLQ9UIM3 349 aa13.01□□□□□ -0.33
CASP4-213ENST00000534356 IRF5Q13568 498 aa12.99□□□□□ -0.33
CASP4-213ENST00000534356 PROSER2Q86WR7 435 aaPredicted RBP12.99□□□□□ -0.33
CASP4-213ENST00000534356 FNBP4Q8N3X1 1017 aaPredicted RBP12.98□□□□□ -0.33
CASP4-213ENST00000534356 PNMA1Q8ND90 353 aa12.96□□□□□ -0.33
CASP4-213ENST00000534356 ARMC2Q8NEN0 867 aa12.96□□□□□ -0.33
CASP4-213ENST00000534356 A0A0G2JS52 829 aa12.95□□□□□ -0.34
CASP4-213ENST00000534356 TRAK2O60296 914 aa12.94□□□□□ -0.34
CASP4-213ENST00000534356 BAP1Q92560 729 aa12.94□□□□□ -0.34
CASP4-213ENST00000534356 ZC3H4Q9UPT8 1303 aaKnown RBP12.93□□□□□ -0.34
CASP4-213ENST00000534356 ZBTB24O43167 697 aaPredicted RBP12.93□□□□□ -0.34
CASP4-213ENST00000534356 EMID1Q96A84 441 aaPredicted RBP12.93□□□□□ -0.34
CASP4-213ENST00000534356 LINC01559Q495D7 138 aa12.92□□□□□ -0.34
CASP4-213ENST00000534356 NBPF14Q5TI25 921 aa12.91□□□□□ -0.34
CASP4-213ENST00000534356 LIAT1Q6ZQX7 453 aa12.91□□□□□ -0.34
CASP4-213ENST00000534356 TRIM32Q13049 653 aa12.9□□□□□ -0.34
CASP4-213ENST00000534356 PDXDC2PQ6P474 469 aa12.9□□□□□ -0.34
CASP4-213ENST00000534356 WWC1Q8IX03 1113 aa12.9□□□□□ -0.34
CASP4-213ENST00000534356 GPKOWQ92917 476 aaPredicted RBP eCLIP12.9□□□□□ -0.34
CASP4-213ENST00000534356 ZNF330Q9Y3S2 320 aaPredicted RBP12.9□□□□□ -0.34
CASP4-213ENST00000534356 SUPT5HO00267 1087 aaKnown RBP12.89□□□□□ -0.35
CASP4-213ENST00000534356 RPIAP49247 311 aa12.89□□□□□ -0.35
CASP4-213ENST00000534356 VAC14Q08AM6 782 aa12.89□□□□□ -0.35
CASP4-213ENST00000534356 FBXO45P0C2W1 286 aa12.88□□□□□ -0.35
CASP4-213ENST00000534356 SH3BP2P78314 561 aa12.88□□□□□ -0.35
CASP4-213ENST00000534356 ZNF511Q8NB15 262 aa12.88□□□□□ -0.35
CASP4-213ENST00000534356 OCSTAMPQ9BR26 566 aa12.88□□□□□ -0.35
CASP4-213ENST00000534356 POM121CA8CG34 1229 aa12.87□□□□□ -0.35
CASP4-213ENST00000534356 WASHC4Q2M389 1173 aa12.87□□□□□ -0.35
CASP4-213ENST00000534356 SH3BP5LQ7L8J4 393 aa12.87□□□□□ -0.35
CASP4-213ENST00000534356 ZBBXA8MT70 800 aa12.86□□□□□ -0.35
CASP4-213ENST00000534356 SLC19A1P41440 591 aa12.86□□□□□ -0.35
CASP4-213ENST00000534356 PTK2Q05397 1052 aa12.86□□□□□ -0.35
CASP4-213ENST00000534356 FOXJ1Q92949 421 aa12.86□□□□□ -0.35
CASP4-213ENST00000534356 ZNF777Q9ULD5 760 aaPredicted RBP12.86□□□□□ -0.35
CASP4-213ENST00000534356 SKOR1P84550 965 aa12.85□□□□□ -0.35
CASP4-213ENST00000534356 NR1H3Q13133 447 aa12.85□□□□□ -0.35
CASP4-213ENST00000534356 GPSM3Q9Y4H4 160 aa12.85□□□□□ -0.35
CASP4-213ENST00000534356 CD2BP2O95400 341 aaKnown RBP12.84□□□□□ -0.35
CASP4-213ENST00000534356 ARHGAP9Q9BRR9 750 aa12.84□□□□□ -0.35
CASP4-213ENST00000534356 ARID3CA6NKF2 412 aa12.83□□□□□ -0.36
CASP4-213ENST00000534356 AGERQ15109 404 aa12.83□□□□□ -0.36
CASP4-213ENST00000534356 C4orf48Q5BLP8 95 aa12.83□□□□□ -0.36
CASP4-213ENST00000534356 SH3RF1Q7Z6J0 888 aa12.83□□□□□ -0.36
CASP4-213ENST00000534356 BPHLQ86WA6 291 aaPredicted RBP12.82□□□□□ -0.36
CASP4-213ENST00000534356 MAGEB6P1A0A0J9YX57 407 aa12.81□□□□□ -0.36
CASP4-213ENST00000534356 WNT7BP56706 349 aa12.81□□□□□ -0.36
CASP4-213ENST00000534356 CARD14Q9BXL6 1004 aa12.81□□□□□ -0.36
CASP4-213ENST00000534356 PRKD2Q9BZL6 878 aa12.81□□□□□ -0.36
CASP4-213ENST00000534356 SPRYD7Q5W111 196 aa12.8□□□□□ -0.36
CASP4-213ENST00000534356 ADAM32Q8TC27 787 aa12.8□□□□□ -0.36
CASP4-213ENST00000534356 ZBTB33Q86T24 672 aa12.79□□□□□ -0.36
CASP4-213ENST00000534356 ADAMTS19Q8TE59 1207 aa12.78□□□□□ -0.36
CASP4-213ENST00000534356 C1orf115Q9H7X2 142 aa12.78□□□□□ -0.36
CASP4-213ENST00000534356 RC3H1Q5TC82 1133 aaKnown RBP12.77□□□□□ -0.37
CASP4-213ENST00000534356 EIF4G2P78344 907 aaKnown RBP eCLIP12.76□□□□□ -0.37
CASP4-213ENST00000534356 ERFEQ4G0M1 354 aa12.76□□□□□ -0.37
CASP4-213ENST00000534356 HDGFL1Q5TGJ6 251 aa12.75□□□□□ -0.37
CASP4-213ENST00000534356 GLMNQ92990 594 aa12.75□□□□□ -0.37
CASP4-213ENST00000534356 C1QTNF2Q9BXJ5 285 aa12.75□□□□□ -0.37
CASP4-213ENST00000534356 ALG2Q9H553 416 aa12.75□□□□□ -0.37
CASP4-213ENST00000534356 V9GY48 417 aaPredicted RBP12.75□□□□□ -0.37
CASP4-213ENST00000534356 ZNF697Q5TEC3 545 aa12.74□□□□□ -0.37
CASP4-213ENST00000534356 ZNF598Q86UK7 904 aaKnown RBP12.74□□□□□ -0.37
CASP4-213ENST00000534356 PCDHB9Q9Y5E1 797 aa12.74□□□□□ -0.37
CASP4-213ENST00000534356 VARSP26640 1264 aaKnown RBP12.73□□□□□ -0.37
CASP4-213ENST00000534356 SOX11P35716 441 aa12.73□□□□□ -0.37
CASP4-213ENST00000534356 SEMA3FQ13275 785 aa12.73□□□□□ -0.37
CASP4-213ENST00000534356 EHBP1Q8NDI1 1231 aa12.73□□□□□ -0.37
CASP4-213ENST00000534356 CALR3Q96L12 384 aaKnown RBP12.72□□□□□ -0.37
CASP4-213ENST00000534356 DZIP3Q86Y13 1208 aaKnown RBP12.71□□□□□ -0.37
CASP4-213ENST00000534356 WNT7AO00755 349 aa12.7□□□□□ -0.38
CASP4-213ENST00000534356 TRMT44Q8IYL2 757 aaKnown RBP12.7□□□□□ -0.38
CASP4-213ENST00000534356 FAM174AQ8TBP5 190 aa12.7□□□□□ -0.38
CASP4-213ENST00000534356 MRGPRX2Q96LB1 330 aa12.69□□□□□ -0.38
CASP4-213ENST00000534356 SIAH2O43255 324 aa12.68□□□□□ -0.38
CASP4-213ENST00000534356 FOXC1Q12948 553 aa12.68□□□□□ -0.38
CASP4-213ENST00000534356 SLC10A4Q96EP9 437 aa12.68□□□□□ -0.38
CASP4-213ENST00000534356 PKD2L1Q9P0L9 805 aa12.68□□□□□ -0.38
CASP4-213ENST00000534356 MCCD1P59942 119 aaPredicted RBP12.67□□□□□ -0.38
CASP4-213ENST00000534356 CEP126Q9P2H0 1117 aa12.66□□□□□ -0.38
CASP4-213ENST00000534356 CCDC82Q8N4S0 544 aa12.65□□□□□ -0.38
CASP4-213ENST00000534356 ZNF592Q92610 1267 aa12.65□□□□□ -0.38
CASP4-213ENST00000534356 TLL2Q9Y6L7 1015 aa12.65□□□□□ -0.38
CASP4-213ENST00000534356 UCN2Q96RP3 112 aa12.64□□□□□ -0.39
CASP4-213ENST00000534356 GDF9O60383 454 aa12.63□□□□□ -0.39
CASP4-213ENST00000534356 RGS20O76081 388 aa12.63□□□□□ -0.39
CASP4-213ENST00000534356 ARID5BQ14865 1188 aa12.63□□□□□ -0.39
CASP4-213ENST00000534356 CDK15Q96Q40 435 aa12.63□□□□□ -0.39
CASP4-213ENST00000534356 GIGYF1O75420 1035 aaPredicted RBP12.62□□□□□ -0.39
CASP4-213ENST00000534356 VASH1Q7L8A9 365 aaPredicted RBP12.62□□□□□ -0.39
CASP4-213ENST00000534356 CDV3Q9UKY7 258 aaKnown RBP12.62□□□□□ -0.39
CASP4-213ENST00000534356 MAP4K5Q9Y4K4 846 aa12.62□□□□□ -0.39
CASP4-213ENST00000534356 TNFRSF10AO00220 468 aa12.61□□□□□ -0.39
CASP4-213ENST00000534356 PIK3CDO00329 1044 aa12.61□□□□□ -0.39
CASP4-213ENST00000534356 NBPF20Q3BBV1 942 aa12.61□□□□□ -0.39
CASP4-213ENST00000534356 TRIM67Q6ZTA4 783 aa12.61□□□□□ -0.39
CASP4-213ENST00000534356 MPNDQ8N594 471 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms