RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-208ENST00000533897 MAPK8IP3Q9UPT6 1336 aa5.74□□□□□ -1.49
CTSC-208ENST00000533897 PTCH1Q13635 1447 aa5.73□□□□□ -1.49
CTSC-208ENST00000533897 SLC12A5Q9H2X9 1139 aa5.73□□□□□ -1.49
CTSC-208ENST00000533897 UBR1Q8IWV7 1749 aa5.73□□□□□ -1.49
CTSC-208ENST00000533897 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.73□□□□□ -1.49
CTSC-208ENST00000533897 PANK1Q8TE04 598 aa5.73□□□□□ -1.49
CTSC-208ENST00000533897 SLC4A3P48751 1232 aa5.73□□□□□ -1.49
CTSC-208ENST00000533897 TCP11L2Q8N4U5 519 aa5.73□□□□□ -1.49
CTSC-208ENST00000533897 FRAT1Q92837 279 aaPredicted RBP5.73□□□□□ -1.49
CTSC-208ENST00000533897 IL16Q14005 1332 aa5.73□□□□□ -1.49
CTSC-208ENST00000533897 XRN1Q8IZH2 1706 aaKnown RBP5.73□□□□□ -1.49
CTSC-208ENST00000533897 CT47B1P0C2W7 299 aaPredicted RBP5.72□□□□□ -1.49
CTSC-208ENST00000533897 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.72□□□□□ -1.49
CTSC-208ENST00000533897 KIF13AQ9H1H9 1805 aa5.72□□□□□ -1.49
CTSC-208ENST00000533897 FAM208AQ9UK61 1670 aaKnown RBP5.72□□□□□ -1.49
CTSC-208ENST00000533897 HDAC1Q13547 482 aaPredicted RBP5.72□□□□□ -1.49
CTSC-208ENST00000533897 NPM2Q86SE8 214 aaKnown RBP5.72□□□□□ -1.49
CTSC-208ENST00000533897 CRYBG1Q9Y4K1 1723 aa5.72□□□□□ -1.49
CTSC-208ENST00000533897 CDK12Q9NYV4 1490 aaPredicted RBP5.72□□□□□ -1.49
CTSC-208ENST00000533897 TECPR2O15040 1411 aa5.72□□□□□ -1.49
CTSC-208ENST00000533897 A2ML1A8K2U0 1454 aa5.72□□□□□ -1.49
CTSC-208ENST00000533897 FRAT2O75474 233 aaPredicted RBP5.72□□□□□ -1.49
CTSC-208ENST00000533897 RGS12O14924 1447 aa5.72□□□□□ -1.49
CTSC-208ENST00000533897 FSD2A1L4K1 749 aa5.71□□□□□ -1.49
CTSC-208ENST00000533897 MTHFSP49914 203 aa5.71□□□□□ -1.5
CTSC-208ENST00000533897 MVPQ14764 893 aaKnown RBP5.71□□□□□ -1.5
CTSC-208ENST00000533897 SMC5Q8IY18 1101 aa5.7□□□□□ -1.5
CTSC-208ENST00000533897 COG6Q9Y2V7 657 aa5.7□□□□□ -1.5
CTSC-208ENST00000533897 KIF2CQ99661 725 aa5.7□□□□□ -1.5
CTSC-208ENST00000533897 BRPF3Q9ULD4 1205 aa5.7□□□□□ -1.5
CTSC-208ENST00000533897 ZBTB40Q9NUA8 1239 aa5.7□□□□□ -1.5
CTSC-208ENST00000533897 PDZRN3Q9UPQ7 1066 aa5.7□□□□□ -1.5
CTSC-208ENST00000533897 TBC1D2Q9BYX2 928 aa5.69□□□□□ -1.5
CTSC-208ENST00000533897 FYB1O15117 783 aa5.69□□□□□ -1.5
CTSC-208ENST00000533897 TMEM132EQ6IEE7 984 aa5.69□□□□□ -1.5
CTSC-208ENST00000533897 PMFBP1Q8TBY8 1022 aa5.69□□□□□ -1.5
CTSC-208ENST00000533897 ZNF853P0CG23 659 aa5.69□□□□□ -1.5
CTSC-208ENST00000533897 TRIM27P14373 513 aa5.69□□□□□ -1.5
CTSC-208ENST00000533897 RTL5Q5HYW3 569 aaPredicted RBP5.69□□□□□ -1.5
CTSC-208ENST00000533897 EVC2Q86UK5 1308 aa5.68□□□□□ -1.5
CTSC-208ENST00000533897 TRAK1Q9UPV9 953 aa5.68□□□□□ -1.5
CTSC-208ENST00000533897 ATAD2Q6PL18 1390 aa5.68□□□□□ -1.5
CTSC-208ENST00000533897 AATKQ6ZMQ8 1374 aa5.68□□□□□ -1.5
CTSC-208ENST00000533897 RBM25P49756 843 aaKnown RBP5.68□□□□□ -1.5
CTSC-208ENST00000533897 TMPOP42166 694 aaKnown RBP5.68□□□□□ -1.5
CTSC-208ENST00000533897 MORC1Q86VD1 984 aa5.68□□□□□ -1.5
CTSC-208ENST00000533897 CACNA1FO60840 1977 aa5.68□□□□□ -1.5
CTSC-208ENST00000533897 RSPH6AQ9H0K4 717 aa5.67□□□□□ -1.5
CTSC-208ENST00000533897 SSH2Q76I76 1423 aa5.67□□□□□ -1.5
CTSC-208ENST00000533897 ATP10DQ9P241 1426 aa5.67□□□□□ -1.5
CTSC-208ENST00000533897 RGPD8O14715 1765 aaPredicted RBP5.67□□□□□ -1.5
CTSC-208ENST00000533897 DIP2AQ14689 1571 aa5.67□□□□□ -1.5
CTSC-208ENST00000533897 IDI1Q13907 227 aa5.67□□□□□ -1.5
CTSC-208ENST00000533897 RRP7AQ9Y3A4 280 aaKnown RBP5.67□□□□□ -1.5
CTSC-208ENST00000533897 NWD1Q149M9 1564 aa5.67□□□□□ -1.5
CTSC-208ENST00000533897 PHRF1Q9P1Y6 1649 aaKnown RBP5.67□□□□□ -1.5
CTSC-208ENST00000533897 RGS3P49796 1198 aa5.67□□□□□ -1.5
CTSC-208ENST00000533897 SSH1Q8WYL5 1049 aa5.67□□□□□ -1.5
CTSC-208ENST00000533897 PIK3C2AO00443 1686 aa5.67□□□□□ -1.5
CTSC-208ENST00000533897 ABCC4O15439 1325 aa5.67□□□□□ -1.5
CTSC-208ENST00000533897 NUCB1Q02818 461 aa5.67□□□□□ -1.5
CTSC-208ENST00000533897 POGKQ9P215 609 aa5.67□□□□□ -1.5
CTSC-208ENST00000533897 KIF24Q5T7B8 1368 aa5.66□□□□□ -1.5
CTSC-208ENST00000533897 ALDH1L2Q3SY69 923 aa5.66□□□□□ -1.5
CTSC-208ENST00000533897 EDC4Q6P2E9 1401 aaKnown RBP5.66□□□□□ -1.5
CTSC-208ENST00000533897 CLEC17AQ6ZS10 378 aa5.66□□□□□ -1.5
CTSC-208ENST00000533897 ANO8Q9HCE9 1232 aaPredicted RBP5.66□□□□□ -1.5
CTSC-208ENST00000533897 VGFO15240 615 aaPredicted RBP5.66□□□□□ -1.5
CTSC-208ENST00000533897 SIRT2Q8IXJ6 389 aa5.66□□□□□ -1.5
CTSC-208ENST00000533897 SNX21Q969T3 373 aa5.66□□□□□ -1.5
CTSC-208ENST00000533897 SLC52A1Q9NWF4 448 aa5.66□□□□□ -1.5
CTSC-208ENST00000533897 MED1Q15648 1581 aaPredicted RBP5.66□□□□□ -1.5
CTSC-208ENST00000533897 ATF7IPQ6VMQ6 1270 aa5.65□□□□□ -1.5
CTSC-208ENST00000533897 MYH16Q9H6N6 1097 aa5.65□□□□□ -1.5
CTSC-208ENST00000533897 CABP2Q9NPB3 220 aa5.65□□□□□ -1.5
CTSC-208ENST00000533897 KDM3BQ7LBC6 1761 aa5.65□□□□□ -1.5
CTSC-208ENST00000533897 OVOS2A0A0J9YW53 1432 aa5.65□□□□□ -1.5
CTSC-208ENST00000533897 OVOS2Q6IE36 1432 aa5.65□□□□□ -1.5
CTSC-208ENST00000533897 FAM43AQ8N2R8 423 aa5.65□□□□□ -1.5
CTSC-208ENST00000533897 TSR2Q969E8 191 aaKnown RBP5.65□□□□□ -1.5
CTSC-208ENST00000533897 AK9Q5TCS8 1911 aa5.65□□□□□ -1.5
CTSC-208ENST00000533897 ZBTB7BO15156 539 aaPredicted RBP5.65□□□□□ -1.51
CTSC-208ENST00000533897 EXOSC9Q06265 439 aaKnown RBP5.65□□□□□ -1.51
CTSC-208ENST00000533897 ZKSCAN2Q63HK3 967 aa5.65□□□□□ -1.51
CTSC-208ENST00000533897 DZIP1LQ8IYY4 767 aaKnown RBP5.65□□□□□ -1.51
CTSC-208ENST00000533897 SIPA1L3O60292 1781 aaPredicted RBP5.65□□□□□ -1.51
CTSC-208ENST00000533897 CAMTA1Q9Y6Y1 1673 aa5.64□□□□□ -1.51
CTSC-208ENST00000533897 ARHGAP45Q92619 1136 aa5.64□□□□□ -1.51
CTSC-208ENST00000533897 ADAMTS7Q9UKP4 1686 aa5.64□□□□□ -1.51
CTSC-208ENST00000533897 IL13P35225 146 aa5.64□□□□□ -1.51
CTSC-208ENST00000533897 RWDD1Q9H446 243 aaPredicted RBP5.64□□□□□ -1.51
CTSC-208ENST00000533897 POLKQ9UBT6 870 aa5.64□□□□□ -1.51
CTSC-208ENST00000533897 TMEM57Q8N5G2 664 aa5.64□□□□□ -1.51
CTSC-208ENST00000533897 MRPL50Q8N5N7 158 aaKnown RBP5.64□□□□□ -1.51
CTSC-208ENST00000533897 ZNF428Q96B54 188 aa5.63□□□□□ -1.51
CTSC-208ENST00000533897 NOB1Q9ULX3 412 aaKnown RBP5.63□□□□□ -1.51
CTSC-208ENST00000533897 TSPOAP1O95153 1857 aa5.63□□□□□ -1.51
CTSC-208ENST00000533897 KIF16BQ96L93 1317 aa5.63□□□□□ -1.51
CTSC-208ENST00000533897 VAMP4O75379 141 aa5.63□□□□□ -1.51
CTSC-208ENST00000533897 RAPGEF3O95398 923 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms