RNA–Protein interactions for RNA: ENST00000533889.1

CAPN5-207, Transcript of calpain 5, humanhuman

TSL 3

Gene CAPN5, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN5-207ENST00000533889 GLI3P10071 1580 aa25.22■■□□□ 1.63
CAPN5-207ENST00000533889 ACEP12821 1306 aa25.21■■□□□ 1.63
CAPN5-207ENST00000533889 NWD2Q9ULI1 1742 aa25.2■■□□□ 1.63
CAPN5-207ENST00000533889 NBPF8Q3BBV2 869 aa25.2■■□□□ 1.62
CAPN5-207ENST00000533889 BTG4Q9NY30 223 aa25.2■■□□□ 1.62
CAPN5-207ENST00000533889 PLEKHG3A1L390 1219 aa25.19■■□□□ 1.62
CAPN5-207ENST00000533889 SEPT12Q8IYM1 358 aa25.18■■□□□ 1.62
CAPN5-207ENST00000533889 CABP2Q9NPB3 220 aa25.18■■□□□ 1.62
CAPN5-207ENST00000533889 NUTM2GQ5VZR2 741 aa25.17■■□□□ 1.62
CAPN5-207ENST00000533889 POLR3AO14802 1390 aaPredicted RBP25.17■■□□□ 1.62
CAPN5-207ENST00000533889 PRDM11Q9NQV5 511 aa25.16■■□□□ 1.62
CAPN5-207ENST00000533889 CCDC125Q86Z20 511 aa25.15■■□□□ 1.62
CAPN5-207ENST00000533889 TOPAZ1Q8N9V7 1692 aa25.14■■□□□ 1.62
CAPN5-207ENST00000533889 COL14A1Q05707 1796 aaKnown RBP25.14■■□□□ 1.62
CAPN5-207ENST00000533889 A0A0G2JS52 829 aa25.14■■□□□ 1.62
CAPN5-207ENST00000533889 MYT1Q01538 1121 aa25.14■■□□□ 1.62
CAPN5-207ENST00000533889 ONECUT3O60422 494 aaPredicted RBP25.13■■□□□ 1.61
CAPN5-207ENST00000533889 ABTB2Q8N961 1025 aa25.13■■□□□ 1.61
CAPN5-207ENST00000533889 PPIP5K1Q6PFW1 1433 aa25.12■■□□□ 1.61
CAPN5-207ENST00000533889 EP400Q96L91 3159 aa25.12■■□□□ 1.61
CAPN5-207ENST00000533889 ROCK2O75116 1388 aaKnown RBP25.12■■□□□ 1.61
CAPN5-207ENST00000533889 QRICH2Q9H0J4 1663 aa25.12■■□□□ 1.61
CAPN5-207ENST00000533889 TRPM1Q7Z4N2 1603 aa25.11■■□□□ 1.61
CAPN5-207ENST00000533889 KIAA0232Q92628 1395 aa25.1■■□□□ 1.61
CAPN5-207ENST00000533889 CRYBG1Q9Y4K1 1723 aa25.1■■□□□ 1.61
CAPN5-207ENST00000533889 ZC3H6P61129 1189 aaKnown RBP25.1■■□□□ 1.61
CAPN5-207ENST00000533889 FAM98CQ17RN3 349 aaKnown RBP25.1■■□□□ 1.61
CAPN5-207ENST00000533889 BRWD3Q6RI45 1802 aa25.09■■□□□ 1.61
CAPN5-207ENST00000533889 CHRNA2Q15822 529 aa25.09■■□□□ 1.61
CAPN5-207ENST00000533889 KRT27Q7Z3Y8 459 aa25.09■■□□□ 1.61
CAPN5-207ENST00000533889 EVC2Q86UK5 1308 aa25.09■■□□□ 1.61
CAPN5-207ENST00000533889 NRAPQ86VF7 1730 aa25.09■■□□□ 1.61
CAPN5-207ENST00000533889 CABP1Q9NZU7 370 aa25.08■■□□□ 1.61
CAPN5-207ENST00000533889 NLRP13Q86W25 1043 aa25.05■■□□□ 1.6
CAPN5-207ENST00000533889 STRN4Q9NRL3 753 aa25.05■■□□□ 1.6
CAPN5-207ENST00000533889 SPATA31A5Q5VU36 1347 aa25.05■■□□□ 1.6
CAPN5-207ENST00000533889 SPATA31A7Q8IWB4 1347 aa25.05■■□□□ 1.6
CAPN5-207ENST00000533889 PHRF1Q9P1Y6 1649 aaKnown RBP25.04■■□□□ 1.6
CAPN5-207ENST00000533889 SF3B2Q13435 895 aaKnown RBP25.04■■□□□ 1.6
CAPN5-207ENST00000533889 BLMP54132 1417 aaPredicted RBP25.03■■□□□ 1.6
CAPN5-207ENST00000533889 EVA1CP58658 441 aa25.02■■□□□ 1.6
CAPN5-207ENST00000533889 ZRANB1Q9UGI0 708 aa25.01■■□□□ 1.59
CAPN5-207ENST00000533889 BRD4O60885 1362 aaPredicted RBP25.01■■□□□ 1.59
CAPN5-207ENST00000533889 TRIM26Q12899 539 aaPredicted RBP25■■□□□ 1.59
CAPN5-207ENST00000533889 TONSLQ96HA7 1378 aa25■■□□□ 1.59
CAPN5-207ENST00000533889 USP19O94966 1318 aa24.99■■□□□ 1.59
CAPN5-207ENST00000533889 GCP02774 474 aa24.99■■□□□ 1.59
CAPN5-207ENST00000533889 CARD11Q9BXL7 1154 aa24.99■■□□□ 1.59
CAPN5-207ENST00000533889 USP6P35125 1406 aa24.98■■□□□ 1.59
CAPN5-207ENST00000533889 SPATA31A1Q5TZJ5 1347 aa24.98■■□□□ 1.59
CAPN5-207ENST00000533889 NLRP6P59044 892 aa24.98■■□□□ 1.59
CAPN5-207ENST00000533889 USP35Q9P2H5 1018 aa24.97■■□□□ 1.59
CAPN5-207ENST00000533889 DEFB132Q7Z7B7 95 aa24.96■■□□□ 1.59
CAPN5-207ENST00000533889 NRKQ7Z2Y5 1582 aa24.96■■□□□ 1.59
CAPN5-207ENST00000533889 CPDO75976 1380 aa24.95■■□□□ 1.59
CAPN5-207ENST00000533889 ZBTB7CA1YPR0 619 aa24.95■■□□□ 1.58
CAPN5-207ENST00000533889 ZNF692Q9BU19 519 aaPredicted RBP24.95■■□□□ 1.58
CAPN5-207ENST00000533889 FAM182BQ5T319 152 aa24.94■■□□□ 1.58
CAPN5-207ENST00000533889 SSH2Q76I76 1423 aa24.92■■□□□ 1.58
CAPN5-207ENST00000533889 CAMTA1Q9Y6Y1 1673 aa24.91■■□□□ 1.58
CAPN5-207ENST00000533889 LARP1Q6PKG0 1096 aaKnown RBP24.91■■□□□ 1.58
CAPN5-207ENST00000533889 TTC21BQ7Z4L5 1316 aa24.89■■□□□ 1.58
CAPN5-207ENST00000533889 THSD7AQ9UPZ6 1657 aa24.89■■□□□ 1.58
CAPN5-207ENST00000533889 BAG6P46379 1132 aa24.88■■□□□ 1.57
CAPN5-207ENST00000533889 BARGINQ6ZT62 677 aa24.87■■□□□ 1.57
CAPN5-207ENST00000533889 TCP11L2Q8N4U5 519 aa24.87■■□□□ 1.57
CAPN5-207ENST00000533889 LMO7Q8WWI1 1683 aa24.86■■□□□ 1.57
CAPN5-207ENST00000533889 KTN1Q86UP2 1357 aaKnown RBP24.86■■□□□ 1.57
CAPN5-207ENST00000533889 SBNO2Q9Y2G9 1366 aa24.86■■□□□ 1.57
CAPN5-207ENST00000533889 PDE3BQ13370 1112 aa24.85■■□□□ 1.57
CAPN5-207ENST00000533889 TTC21AQ8NDW8 1320 aa24.85■■□□□ 1.57
CAPN5-207ENST00000533889 PIK3C2AO00443 1686 aa24.85■■□□□ 1.57
CAPN5-207ENST00000533889 SOX12O15370 315 aa24.84■■□□□ 1.57
CAPN5-207ENST00000533889 TMC1Q8TDI8 760 aa24.84■■□□□ 1.57
CAPN5-207ENST00000533889 SLIT3O75094 1523 aa24.84■■□□□ 1.57
CAPN5-207ENST00000533889 CPSF1Q10570 1443 aaKnown RBP24.84■■□□□ 1.57
CAPN5-207ENST00000533889 AATKQ6ZMQ8 1374 aa24.83■■□□□ 1.57
CAPN5-207ENST00000533889 AKAP12Q02952 1782 aa24.83■■□□□ 1.57
CAPN5-207ENST00000533889 FAM196AQ6ZSG2 479 aa24.83■■□□□ 1.57
CAPN5-207ENST00000533889 KCNH5Q8NCM2 988 aa24.83■■□□□ 1.57
CAPN5-207ENST00000533889 THRAP3Q9Y2W1 955 aaKnown RBP24.83■■□□□ 1.57
CAPN5-207ENST00000533889 COL5A2P05997 1499 aaPredicted RBP24.83■■□□□ 1.56
CAPN5-207ENST00000533889 EN1Q05925 392 aaPredicted RBP24.8■■□□□ 1.56
CAPN5-207ENST00000533889 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.8■■□□□ 1.56
CAPN5-207ENST00000533889 RGPD1P0DJD0 1748 aa24.79■■□□□ 1.56
CAPN5-207ENST00000533889 TRIM37O94972 964 aa24.79■■□□□ 1.56
CAPN5-207ENST00000533889 TOM1L2Q6ZVM7 507 aa24.79■■□□□ 1.56
CAPN5-207ENST00000533889 HDGFL2Q7Z4V5 671 aaPredicted RBP24.79■■□□□ 1.56
CAPN5-207ENST00000533889 CRB1P82279 1406 aa24.78■■□□□ 1.56
CAPN5-207ENST00000533889 SRCAPQ6ZRS2 3230 aa24.78■■□□□ 1.56
CAPN5-207ENST00000533889 ARHGEF25Q86VW2 580 aa24.78■■□□□ 1.56
CAPN5-207ENST00000533889 SLC12A5Q9H2X9 1139 aa24.77■■□□□ 1.56
CAPN5-207ENST00000533889 AXIN2Q9Y2T1 843 aa24.77■■□□□ 1.56
CAPN5-207ENST00000533889 ST20-MTHFSA0A0A6YYL1 179 aa24.75■■□□□ 1.55
CAPN5-207ENST00000533889 TERF2IPQ9NYB0 399 aa24.75■■□□□ 1.55
CAPN5-207ENST00000533889 CSB-PGBD3P0DP91 1061 aa24.74■■□□□ 1.55
CAPN5-207ENST00000533889 MON2Q7Z3U7 1717 aa24.74■■□□□ 1.55
CAPN5-207ENST00000533889 WDR17Q8IZU2 1322 aa24.73■■□□□ 1.55
CAPN5-207ENST00000533889 APBA3O96018 575 aa24.73■■□□□ 1.55
CAPN5-207ENST00000533889 NME9Q86XW9 330 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms