RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 EZH2Q15910 746 aaKnown RBP13.74□□□□□ -0.21
PACS1-214ENST00000533811 THSD7AQ9UPZ6 1657 aa13.73□□□□□ -0.21
PACS1-214ENST00000533811 SPATA31A5Q5VU36 1347 aa13.73□□□□□ -0.21
PACS1-214ENST00000533811 SPATA31A7Q8IWB4 1347 aa13.73□□□□□ -0.21
PACS1-214ENST00000533811 MINK1Q8N4C8 1332 aaPredicted RBP13.73□□□□□ -0.21
PACS1-214ENST00000533811 PRDM11Q9NQV5 511 aa13.73□□□□□ -0.21
PACS1-214ENST00000533811 TRIM37O94972 964 aa13.72□□□□□ -0.21
PACS1-214ENST00000533811 NGDNQ8NEJ9 315 aaKnown RBP13.72□□□□□ -0.21
PACS1-214ENST00000533811 TRAK1Q9UPV9 953 aa13.72□□□□□ -0.21
PACS1-214ENST00000533811 DLC1Q96QB1 1528 aa13.72□□□□□ -0.21
PACS1-214ENST00000533811 CRYBG1Q9Y4K1 1723 aa13.72□□□□□ -0.21
PACS1-214ENST00000533811 ACIN1Q9UKV3 1341 aaKnown RBP13.71□□□□□ -0.21
PACS1-214ENST00000533811 STRN4Q9NRL3 753 aa13.71□□□□□ -0.21
PACS1-214ENST00000533811 EIF3AQ14152 1382 aaKnown RBP13.71□□□□□ -0.22
PACS1-214ENST00000533811 PRR36Q9H6K5 1346 aa13.7□□□□□ -0.22
PACS1-214ENST00000533811 CHRNA2Q15822 529 aa13.7□□□□□ -0.22
PACS1-214ENST00000533811 DISP2A7MBM2 1401 aa13.7□□□□□ -0.22
PACS1-214ENST00000533811 TULP4Q9NRJ4 1543 aa13.69□□□□□ -0.22
PACS1-214ENST00000533811 USP35Q9P2H5 1018 aa13.69□□□□□ -0.22
PACS1-214ENST00000533811 APBA3O96018 575 aa13.68□□□□□ -0.22
PACS1-214ENST00000533811 FAM196AQ6ZSG2 479 aa13.68□□□□□ -0.22
PACS1-214ENST00000533811 KIAA0232Q92628 1395 aa13.68□□□□□ -0.22
PACS1-214ENST00000533811 ITSN1Q15811 1721 aa13.67□□□□□ -0.22
PACS1-214ENST00000533811 SPATA31A1Q5TZJ5 1347 aa13.67□□□□□ -0.22
PACS1-214ENST00000533811 ZC3H6P61129 1189 aaKnown RBP13.67□□□□□ -0.22
PACS1-214ENST00000533811 NUTM2GQ5VZR2 741 aa13.67□□□□□ -0.22
PACS1-214ENST00000533811 CAMKK2Q96RR4 588 aa13.67□□□□□ -0.22
PACS1-214ENST00000533811 PHRF1Q9P1Y6 1649 aaKnown RBP13.67□□□□□ -0.22
PACS1-214ENST00000533811 ADGRB1O14514 1584 aa13.66□□□□□ -0.22
PACS1-214ENST00000533811 WASLO00401 505 aaPredicted RBP13.66□□□□□ -0.22
PACS1-214ENST00000533811 YY1P25490 414 aa13.66□□□□□ -0.22
PACS1-214ENST00000533811 KDM2AQ9Y2K7 1162 aa13.66□□□□□ -0.22
PACS1-214ENST00000533811 RREB1Q92766 1687 aa13.66□□□□□ -0.22
PACS1-214ENST00000533811 NUP188Q5SRE5 1749 aa13.65□□□□□ -0.22
PACS1-214ENST00000533811 EVA1CP58658 441 aa13.65□□□□□ -0.22
PACS1-214ENST00000533811 PDE3BQ13370 1112 aa13.65□□□□□ -0.22
PACS1-214ENST00000533811 PPP1R1BQ9UD71 204 aaPredicted RBP13.64□□□□□ -0.23
PACS1-214ENST00000533811 PARD3Q8TEW0 1356 aa13.63□□□□□ -0.23
PACS1-214ENST00000533811 NBPF8Q3BBV2 869 aa13.63□□□□□ -0.23
PACS1-214ENST00000533811 NBPF14Q5TI25 921 aa13.63□□□□□ -0.23
PACS1-214ENST00000533811 NUDT16Q96DE0 195 aaKnown RBP13.62□□□□□ -0.23
PACS1-214ENST00000533811 SSH2Q76I76 1423 aa13.62□□□□□ -0.23
PACS1-214ENST00000533811 ARHGEF28Q8N1W1 1705 aaKnown RBP13.61□□□□□ -0.23
PACS1-214ENST00000533811 ATP7BP35670 1465 aa13.61□□□□□ -0.23
PACS1-214ENST00000533811 DCAF8L1A6NGE4 600 aa13.6□□□□□ -0.23
PACS1-214ENST00000533811 LARP1Q6PKG0 1096 aaKnown RBP13.6□□□□□ -0.23
PACS1-214ENST00000533811 DCAF11Q8TEB1 546 aa13.6□□□□□ -0.23
PACS1-214ENST00000533811 ZBTB7CA1YPR0 619 aa13.59□□□□□ -0.23
PACS1-214ENST00000533811 SPON1Q9HCB6 807 aa13.59□□□□□ -0.23
PACS1-214ENST00000533811 NRKQ7Z2Y5 1582 aa13.58□□□□□ -0.23
PACS1-214ENST00000533811 BARGINQ6ZT62 677 aa13.58□□□□□ -0.24
PACS1-214ENST00000533811 TCP11L2Q8N4U5 519 aa13.58□□□□□ -0.24
PACS1-214ENST00000533811 CAMTA1Q9Y6Y1 1673 aa13.57□□□□□ -0.24
PACS1-214ENST00000533811 KCNQ2O43526 872 aa13.57□□□□□ -0.24
PACS1-214ENST00000533811 ABTB2Q8N961 1025 aa13.57□□□□□ -0.24
PACS1-214ENST00000533811 CDK19Q9BWU1 502 aa13.57□□□□□ -0.24
PACS1-214ENST00000533811 ACEP12821 1306 aa13.57□□□□□ -0.24
PACS1-214ENST00000533811 TOPAZ1Q8N9V7 1692 aa13.56□□□□□ -0.24
PACS1-214ENST00000533811 LMO7Q8WWI1 1683 aa13.55□□□□□ -0.24
PACS1-214ENST00000533811 PARP4Q9UKK3 1724 aaKnown RBP13.55□□□□□ -0.24
PACS1-214ENST00000533811 RAB3GAP2Q9H2M9 1393 aa13.55□□□□□ -0.24
PACS1-214ENST00000533811 POLR3AO14802 1390 aaPredicted RBP13.54□□□□□ -0.24
PACS1-214ENST00000533811 NINLQ9Y2I6 1382 aa13.54□□□□□ -0.24
PACS1-214ENST00000533811 SBF2Q86WG5 1849 aa13.53□□□□□ -0.24
PACS1-214ENST00000533811 CCDC61Q9Y6R9 512 aa13.53□□□□□ -0.24
PACS1-214ENST00000533811 THRAP3Q9Y2W1 955 aaKnown RBP13.52□□□□□ -0.25
PACS1-214ENST00000533811 CPDO75976 1380 aa13.52□□□□□ -0.25
PACS1-214ENST00000533811 OVOS2A0A0G2JMS6 1433 aa13.52□□□□□ -0.25
PACS1-214ENST00000533811 OVOS2A0A0J9YW53 1432 aa13.52□□□□□ -0.25
PACS1-214ENST00000533811 OVOS2Q6IE36 1432 aa13.52□□□□□ -0.25
PACS1-214ENST00000533811 COL5A2P05997 1499 aaPredicted RBP13.52□□□□□ -0.25
PACS1-214ENST00000533811 USP19O94966 1318 aa13.51□□□□□ -0.25
PACS1-214ENST00000533811 NLRP13Q86W25 1043 aa13.51□□□□□ -0.25
PACS1-214ENST00000533811 ANO8Q9HCE9 1232 aaPredicted RBP13.51□□□□□ -0.25
PACS1-214ENST00000533811 LRRC37A3O60309 1634 aa13.5□□□□□ -0.25
PACS1-214ENST00000533811 CRB1P82279 1406 aa13.5□□□□□ -0.25
PACS1-214ENST00000533811 GCP02774 474 aa13.5□□□□□ -0.25
PACS1-214ENST00000533811 SRPK2P78362 688 aaKnown RBP13.5□□□□□ -0.25
PACS1-214ENST00000533811 BCL11BQ9C0K0 894 aaPredicted RBP13.5□□□□□ -0.25
PACS1-214ENST00000533811 RGPD3A6NKT7 1758 aaPredicted RBP13.5□□□□□ -0.25
PACS1-214ENST00000533811 RGPD4Q7Z3J3 1758 aa13.5□□□□□ -0.25
PACS1-214ENST00000533811 PEAK1Q9H792 1746 aa13.5□□□□□ -0.25
PACS1-214ENST00000533811 PLEKHG3A1L390 1219 aa13.49□□□□□ -0.25
PACS1-214ENST00000533811 C11orf95C9JLR9 678 aaPredicted RBP13.49□□□□□ -0.25
PACS1-214ENST00000533811 ZBTB7AO95365 584 aa13.49□□□□□ -0.25
PACS1-214ENST00000533811 DDB1Q16531 1140 aa13.49□□□□□ -0.25
PACS1-214ENST00000533811 STAC3Q96MF2 364 aa13.49□□□□□ -0.25
PACS1-214ENST00000533811 CASZ1Q86V15 1759 aa13.49□□□□□ -0.25
PACS1-214ENST00000533811 PPIP5K1Q6PFW1 1433 aa13.48□□□□□ -0.25
PACS1-214ENST00000533811 AKAP12Q02952 1782 aa13.48□□□□□ -0.25
PACS1-214ENST00000533811 MYOM1P52179 1685 aa13.48□□□□□ -0.25
PACS1-214ENST00000533811 TOM1L2Q6ZVM7 507 aa13.48□□□□□ -0.25
PACS1-214ENST00000533811 WNK3Q9BYP7 1800 aa13.48□□□□□ -0.25
PACS1-214ENST00000533811 PTF1AQ7RTS3 328 aa13.47□□□□□ -0.25
PACS1-214ENST00000533811 PDGFDQ9GZP0 370 aaPredicted RBP13.47□□□□□ -0.25
PACS1-214ENST00000533811 ATF5Q9Y2D1 282 aaPredicted RBP13.47□□□□□ -0.25
PACS1-214ENST00000533811 PLSCR1O15162 318 aa13.46□□□□□ -0.25
PACS1-214ENST00000533811 NLRP6P59044 892 aa13.46□□□□□ -0.25
PACS1-214ENST00000533811 CABP2Q9NPB3 220 aa13.46□□□□□ -0.25
PACS1-214ENST00000533811 KIAA1210Q9ULL0 1709 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms