RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 PPARGC1BQ86YN6 1023 aaKnown RBP11.6□□□□□ -0.55
CASP4-212ENST00000533730 BCORL1Q5H9F3 1711 aa11.6□□□□□ -0.55
CASP4-212ENST00000533730 DMRTA1Q5VZB9 504 aa11.59□□□□□ -0.55
CASP4-212ENST00000533730 CERKQ8TCT0 537 aa11.59□□□□□ -0.55
CASP4-212ENST00000533730 ABCC5O15440 1437 aa11.59□□□□□ -0.55
CASP4-212ENST00000533730 CROCC2H7BZ55 1655 aa11.59□□□□□ -0.55
CASP4-212ENST00000533730 DHX29Q7Z478 1369 aaKnown RBP11.58□□□□□ -0.56
CASP4-212ENST00000533730 CDAN1Q8IWY9 1227 aa11.58□□□□□ -0.56
CASP4-212ENST00000533730 ADAMTSL3P82987 1691 aa11.58□□□□□ -0.56
CASP4-212ENST00000533730 PLXNC1O60486 1568 aa11.58□□□□□ -0.56
CASP4-212ENST00000533730 PLEKHG3A1L390 1219 aa11.57□□□□□ -0.56
CASP4-212ENST00000533730 FCHSD2O94868 740 aa11.57□□□□□ -0.56
CASP4-212ENST00000533730 HRCP23327 699 aa11.57□□□□□ -0.56
CASP4-212ENST00000533730 ZBED2Q9BTP6 218 aa11.57□□□□□ -0.56
CASP4-212ENST00000533730 RRBP1Q9P2E9 1410 aaKnown RBP11.57□□□□□ -0.56
CASP4-212ENST00000533730 HIC1Q14526 733 aa11.56□□□□□ -0.56
CASP4-212ENST00000533730 SLC4A5Q9BY07 1137 aa11.56□□□□□ -0.56
CASP4-212ENST00000533730 SIGLEC1Q9BZZ2 1709 aa11.56□□□□□ -0.56
CASP4-212ENST00000533730 ANKRD30AQ9BXX3 1397 aa11.55□□□□□ -0.56
CASP4-212ENST00000533730 PRSS12P56730 875 aa11.54□□□□□ -0.56
CASP4-212ENST00000533730 LSM11P83369 360 aaKnown RBP eCLIP11.54□□□□□ -0.56
CASP4-212ENST00000533730 MLECQ14165 292 aa11.54□□□□□ -0.56
CASP4-212ENST00000533730 TTC13Q8NBP0 860 aa11.54□□□□□ -0.56
CASP4-212ENST00000533730 RBM27Q9P2N5 1060 aaKnown RBP11.54□□□□□ -0.56
CASP4-212ENST00000533730 ADGRL2O95490 1459 aa11.54□□□□□ -0.56
CASP4-212ENST00000533730 DUOX2Q9NRD8 1548 aa11.54□□□□□ -0.56
CASP4-212ENST00000533730 KIF15Q9NS87 1388 aa11.54□□□□□ -0.56
CASP4-212ENST00000533730 MADDQ8WXG6 1647 aa11.53□□□□□ -0.56
CASP4-212ENST00000533730 GNPATO15228 680 aa11.53□□□□□ -0.56
CASP4-212ENST00000533730 FECHP22830 423 aa11.53□□□□□ -0.56
CASP4-212ENST00000533730 ESF1Q9H501 851 aaKnown RBP11.53□□□□□ -0.56
CASP4-212ENST00000533730 FAM198AQ9UFP1 575 aa11.53□□□□□ -0.56
CASP4-212ENST00000533730 NCOA1Q15788 1441 aa11.52□□□□□ -0.56
CASP4-212ENST00000533730 CNTLNQ9NXG0 1405 aa11.52□□□□□ -0.56
CASP4-212ENST00000533730 FAM135AQ9P2D6 1515 aa11.52□□□□□ -0.57
CASP4-212ENST00000533730 PROX2Q3B8N5 592 aa11.52□□□□□ -0.57
CASP4-212ENST00000533730 CCDC102AQ96A19 550 aa11.52□□□□□ -0.57
CASP4-212ENST00000533730 CDCA7LQ96GN5 454 aa11.52□□□□□ -0.57
CASP4-212ENST00000533730 DDRGK1Q96HY6 314 aa11.52□□□□□ -0.57
CASP4-212ENST00000533730 TSKSQ9UJT2 592 aa11.52□□□□□ -0.57
CASP4-212ENST00000533730 MINK1Q8N4C8 1332 aaPredicted RBP11.52□□□□□ -0.57
CASP4-212ENST00000533730 EIF2AK4Q9P2K8 1649 aaKnown RBP11.52□□□□□ -0.57
CASP4-212ENST00000533730 ROCK1Q13464 1354 aa11.52□□□□□ -0.57
CASP4-212ENST00000533730 ERBINQ96RT1 1412 aa11.52□□□□□ -0.57
CASP4-212ENST00000533730 FER1L4A9Z1Z3 1794 aa11.51□□□□□ -0.57
CASP4-212ENST00000533730 PTPRMP28827 1452 aa11.51□□□□□ -0.57
CASP4-212ENST00000533730 TK2O00142 265 aa11.51□□□□□ -0.57
CASP4-212ENST00000533730 APBB1O00213 710 aa11.51□□□□□ -0.57
CASP4-212ENST00000533730 KIF3BO15066 747 aa11.51□□□□□ -0.57
CASP4-212ENST00000533730 ONECUT3O60422 494 aaPredicted RBP11.51□□□□□ -0.57
CASP4-212ENST00000533730 VPS9D1Q9Y2B5 631 aa11.51□□□□□ -0.57
CASP4-212ENST00000533730 TRIM6-TRIM34B2RNG4 842 aa11.5□□□□□ -0.57
CASP4-212ENST00000533730 RRP7BPQ9NSQ0 103 aa11.5□□□□□ -0.57
CASP4-212ENST00000533730 CHIC2Q9UKJ5 165 aa11.5□□□□□ -0.57
CASP4-212ENST00000533730 RIMS1Q86UR5 1692 aaKnown RBP11.49□□□□□ -0.57
CASP4-212ENST00000533730 MAP2K5Q13163 448 aa11.49□□□□□ -0.57
CASP4-212ENST00000533730 GGT6Q6P531 493 aa11.49□□□□□ -0.57
CASP4-212ENST00000533730 PADI6Q6TGC4 694 aa11.49□□□□□ -0.57
CASP4-212ENST00000533730 PARP9Q8IXQ6 854 aa11.49□□□□□ -0.57
CASP4-212ENST00000533730 PCDH10Q9P2E7 1040 aa11.49□□□□□ -0.57
CASP4-212ENST00000533730 FLIIQ13045 1269 aa11.48□□□□□ -0.57
CASP4-212ENST00000533730 RNF17Q9BXT8 1623 aaKnown RBP11.48□□□□□ -0.57
CASP4-212ENST00000533730 MROH2AA6NES4 1674 aa11.47□□□□□ -0.57
CASP4-212ENST00000533730 PTPRKQ15262 1439 aa11.47□□□□□ -0.57
CASP4-212ENST00000533730 ITGAEP38570 1179 aa11.47□□□□□ -0.57
CASP4-212ENST00000533730 AMHR2Q16671 573 aa11.47□□□□□ -0.57
CASP4-212ENST00000533730 ADGRD1Q6QNK2 874 aa11.47□□□□□ -0.57
CASP4-212ENST00000533730 KDM5DQ9BY66 1539 aa11.46□□□□□ -0.57
CASP4-212ENST00000533730 ANKRD50Q9ULJ7 1429 aa11.46□□□□□ -0.57
CASP4-212ENST00000533730 BHMG1C9JSJ3 638 aaPredicted RBP11.46□□□□□ -0.57
CASP4-212ENST00000533730 C3orf80F5H4A9 247 aa11.46□□□□□ -0.57
CASP4-212ENST00000533730 IRF6O14896 467 aa11.46□□□□□ -0.57
CASP4-212ENST00000533730 HRO43593 1189 aa11.46□□□□□ -0.57
CASP4-212ENST00000533730 ANKRD13DQ6ZTN6 518 aa11.45□□□□□ -0.58
CASP4-212ENST00000533730 RABGEF1Q9UJ41 708 aa11.45□□□□□ -0.58
CASP4-212ENST00000533730 KANK1Q14678 1352 aa11.44□□□□□ -0.58
CASP4-212ENST00000533730 WASHC2CQ9Y4E1 1318 aa11.44□□□□□ -0.58
CASP4-212ENST00000533730 ZC3H13Q5T200 1668 aaKnown RBP11.44□□□□□ -0.58
CASP4-212ENST00000533730 KIAA1468Q9P260 1216 aa11.44□□□□□ -0.58
CASP4-212ENST00000533730 PRDM15P57071 1507 aaPredicted RBP11.44□□□□□ -0.58
CASP4-212ENST00000533730 ZMYM3Q14202 1370 aa11.43□□□□□ -0.58
CASP4-212ENST00000533730 DEPDC5O75140 1603 aa11.43□□□□□ -0.58
CASP4-212ENST00000533730 CLTCQ00610 1675 aaKnown RBP11.43□□□□□ -0.58
CASP4-212ENST00000533730 PACS2Q86VP3 889 aa11.42□□□□□ -0.58
CASP4-212ENST00000533730 ADGRG1Q9Y653 693 aa11.42□□□□□ -0.58
CASP4-212ENST00000533730 C3P01024 1663 aa11.42□□□□□ -0.58
CASP4-212ENST00000533730 NPATQ14207 1427 aa11.42□□□□□ -0.58
CASP4-212ENST00000533730 MROH1Q8NDA8 1641 aa11.42□□□□□ -0.58
CASP4-212ENST00000533730 NPM2Q86SE8 214 aaKnown RBP11.41□□□□□ -0.58
CASP4-212ENST00000533730 ABCC3O15438 1527 aa11.4□□□□□ -0.58
CASP4-212ENST00000533730 FAM161AQ3B820 660 aa11.4□□□□□ -0.58
CASP4-212ENST00000533730 TATDN2Q93075 761 aa11.4□□□□□ -0.58
CASP4-212ENST00000533730 EYA1Q99502 592 aa11.4□□□□□ -0.58
CASP4-212ENST00000533730 HFM1A2PYH4 1435 aa11.4□□□□□ -0.58
CASP4-212ENST00000533730 PZPP20742 1482 aa11.39□□□□□ -0.59
CASP4-212ENST00000533730 CEBPAP49715 358 aaPredicted RBP11.39□□□□□ -0.59
CASP4-212ENST00000533730 NAIPQ13075 1403 aa11.39□□□□□ -0.59
CASP4-212ENST00000533730 GCC2Q8IWJ2 1684 aa11.39□□□□□ -0.59
CASP4-212ENST00000533730 ACIN1Q9UKV3 1341 aaKnown RBP11.38□□□□□ -0.59
CASP4-212ENST00000533730 UNC13BO14795 1591 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms