RNA–Protein interactions for RNA: ENST00000533685.1

SYVN1-215, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-215ENST00000533685 NHSL1Q5SYE7 1610 aa16.93■□□□□ 0.3
SYVN1-215ENST00000533685 TTC21BQ7Z4L5 1316 aa16.93■□□□□ 0.3
SYVN1-215ENST00000533685 ROBO1Q9Y6N7 1651 aa16.92■□□□□ 0.3
SYVN1-215ENST00000533685 UBAP1LF5GYI3 381 aa16.92■□□□□ 0.3
SYVN1-215ENST00000533685 DIEXFQ68CQ4 756 aaKnown RBP16.92■□□□□ 0.3
SYVN1-215ENST00000533685 USP31Q70CQ4 1352 aa16.91■□□□□ 0.3
SYVN1-215ENST00000533685 KRT28Q7Z3Y7 464 aa16.9■□□□□ 0.3
SYVN1-215ENST00000533685 TRPM3Q9HCF6 1732 aaPredicted RBP16.9■□□□□ 0.3
SYVN1-215ENST00000533685 USP54Q70EL1 1684 aa16.89■□□□□ 0.29
SYVN1-215ENST00000533685 FYB1O15117 783 aa16.89■□□□□ 0.29
SYVN1-215ENST00000533685 SCAF1Q9H7N4 1312 aaKnown RBP16.89■□□□□ 0.29
SYVN1-215ENST00000533685 ARHGEF10O15013 1369 aa16.89■□□□□ 0.29
SYVN1-215ENST00000533685 OVOS2A0A0J9YW53 1432 aa16.88■□□□□ 0.29
SYVN1-215ENST00000533685 TNS3Q68CZ2 1445 aa16.88■□□□□ 0.29
SYVN1-215ENST00000533685 OVOS2Q6IE36 1432 aa16.88■□□□□ 0.29
SYVN1-215ENST00000533685 RALBP1Q15311 655 aa16.88■□□□□ 0.29
SYVN1-215ENST00000533685 PARD3Q8TEW0 1356 aa16.88■□□□□ 0.29
SYVN1-215ENST00000533685 SPATA31A3Q5VYP0 1347 aa16.87■□□□□ 0.29
SYVN1-215ENST00000533685 ALS2Q96Q42 1657 aa16.86■□□□□ 0.29
SYVN1-215ENST00000533685 MED1Q15648 1581 aaPredicted RBP16.85■□□□□ 0.29
SYVN1-215ENST00000533685 PIK3C2AO00443 1686 aa16.85■□□□□ 0.29
SYVN1-215ENST00000533685 ANKRD26Q9UPS8 1709 aa16.85■□□□□ 0.29
SYVN1-215ENST00000533685 KIF20BQ96Q89 1820 aa16.85■□□□□ 0.29
SYVN1-215ENST00000533685 ANP32CO43423 234 aa16.85■□□□□ 0.29
SYVN1-215ENST00000533685 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.85■□□□□ 0.29
SYVN1-215ENST00000533685 PRKRIP1Q9H875 184 aaPredicted RBP16.85■□□□□ 0.29
SYVN1-215ENST00000533685 LRRC59Q96AG4 307 aaKnown RBP16.84■□□□□ 0.29
SYVN1-215ENST00000533685 COG3Q96JB2 828 aa16.84■□□□□ 0.29
SYVN1-215ENST00000533685 USP19O94966 1318 aa16.83■□□□□ 0.28
SYVN1-215ENST00000533685 AATKQ6ZMQ8 1374 aa16.83■□□□□ 0.28
SYVN1-215ENST00000533685 NLRP13Q86W25 1043 aa16.83■□□□□ 0.28
SYVN1-215ENST00000533685 NME9Q86XW9 330 aa16.83■□□□□ 0.28
SYVN1-215ENST00000533685 ABTB2Q8N961 1025 aa16.83■□□□□ 0.28
SYVN1-215ENST00000533685 COL16A1Q07092 1604 aaPredicted RBP16.82■□□□□ 0.28
SYVN1-215ENST00000533685 PAK3O75914 559 aaPredicted RBP16.82■□□□□ 0.28
SYVN1-215ENST00000533685 PIP4K2BP78356 416 aa16.82■□□□□ 0.28
SYVN1-215ENST00000533685 DDX17Q92841 729 aaKnown RBP16.82■□□□□ 0.28
SYVN1-215ENST00000533685 XPCQ01831 940 aaPredicted RBP16.81■□□□□ 0.28
SYVN1-215ENST00000533685 CC2D1BQ5T0F9 858 aaKnown RBP16.81■□□□□ 0.28
SYVN1-215ENST00000533685 MORC1Q86VD1 984 aa16.81■□□□□ 0.28
SYVN1-215ENST00000533685 GGNBP2Q9H3C7 697 aa16.81■□□□□ 0.28
SYVN1-215ENST00000533685 SLIT3O75094 1523 aa16.8■□□□□ 0.28
SYVN1-215ENST00000533685 NLRP6P59044 892 aa16.8■□□□□ 0.28
SYVN1-215ENST00000533685 KCNH5Q8NCM2 988 aa16.8■□□□□ 0.28
SYVN1-215ENST00000533685 PHLPP1O60346 1717 aa16.79■□□□□ 0.28
SYVN1-215ENST00000533685 KIF24Q5T7B8 1368 aa16.78■□□□□ 0.28
SYVN1-215ENST00000533685 MYBBP1AQ9BQG0 1328 aaKnown RBP16.78■□□□□ 0.28
SYVN1-215ENST00000533685 SMG6Q86US8 1419 aaKnown RBP16.78■□□□□ 0.28
SYVN1-215ENST00000533685 COL22A1Q8NFW1 1626 aaPredicted RBP16.78■□□□□ 0.28
SYVN1-215ENST00000533685 MARF1Q9Y4F3 1742 aaKnown RBP16.77■□□□□ 0.28
SYVN1-215ENST00000533685 PNPLA6Q8IY17 1366 aa16.76■□□□□ 0.27
SYVN1-215ENST00000533685 NFAT5O94916 1531 aa16.75■□□□□ 0.27
SYVN1-215ENST00000533685 CRYBG1Q9Y4K1 1723 aa16.74■□□□□ 0.27
SYVN1-215ENST00000533685 CCER2I3L3R5 266 aa16.74■□□□□ 0.27
SYVN1-215ENST00000533685 GCP02774 474 aa16.74■□□□□ 0.27
SYVN1-215ENST00000533685 PPP2R1AP30153 589 aa16.74■□□□□ 0.27
SYVN1-215ENST00000533685 ZRANB1Q9UGI0 708 aa16.74■□□□□ 0.27
SYVN1-215ENST00000533685 ABCC6O95255 1503 aa16.74■□□□□ 0.27
SYVN1-215ENST00000533685 CPDO75976 1380 aa16.74■□□□□ 0.27
SYVN1-215ENST00000533685 JCADQ9P266 1359 aa16.74■□□□□ 0.27
SYVN1-215ENST00000533685 SHPRHQ149N8 1683 aa16.73■□□□□ 0.27
SYVN1-215ENST00000533685 LMOD2Q6P5Q4 547 aa16.73■□□□□ 0.27
SYVN1-215ENST00000533685 FBXO41Q8TF61 875 aa16.73■□□□□ 0.27
SYVN1-215ENST00000533685 RTL1A6NKG5 1358 aa16.73■□□□□ 0.27
SYVN1-215ENST00000533685 INSRP06213 1382 aa16.73■□□□□ 0.27
SYVN1-215ENST00000533685 PHRF1Q9P1Y6 1649 aaKnown RBP16.72■□□□□ 0.27
SYVN1-215ENST00000533685 CDK12Q9NYV4 1490 aaPredicted RBP16.71■□□□□ 0.27
SYVN1-215ENST00000533685 SPATA31A6Q5VVP1 1343 aa16.7■□□□□ 0.26
SYVN1-215ENST00000533685 NUTM2GQ5VZR2 741 aa16.7■□□□□ 0.26
SYVN1-215ENST00000533685 POLKQ9UBT6 870 aa16.7■□□□□ 0.26
SYVN1-215ENST00000533685 ARHGEF25Q86VW2 580 aa16.69■□□□□ 0.26
SYVN1-215ENST00000533685 ABCA3Q99758 1704 aa16.69■□□□□ 0.26
SYVN1-215ENST00000533685 FLT4P35916 1363 aa16.68■□□□□ 0.26
SYVN1-215ENST00000533685 HSPA1LP34931 641 aa16.68■□□□□ 0.26
SYVN1-215ENST00000533685 MIER1Q8N108 512 aa16.68■□□□□ 0.26
SYVN1-215ENST00000533685 MAP3K19Q56UN5 1328 aa16.68■□□□□ 0.26
SYVN1-215ENST00000533685 MTHFSP49914 203 aa16.67■□□□□ 0.26
SYVN1-215ENST00000533685 BLMP54132 1417 aaPredicted RBP16.67■□□□□ 0.26
SYVN1-215ENST00000533685 TNNT2P45379 298 aaPredicted RBP16.66■□□□□ 0.26
SYVN1-215ENST00000533685 CFAP53Q96M91 514 aa16.66■□□□□ 0.26
SYVN1-215ENST00000533685 CNGB1Q14028 1251 aaPredicted RBP16.65■□□□□ 0.26
SYVN1-215ENST00000533685 RRS1Q15050 365 aaKnown RBP16.64■□□□□ 0.25
SYVN1-215ENST00000533685 IP6K1Q92551 441 aa16.64■□□□□ 0.25
SYVN1-215ENST00000533685 EMILIN1Q9Y6C2 1016 aa16.64■□□□□ 0.25
SYVN1-215ENST00000533685 COL3A1P02461 1466 aaPredicted RBP16.64■□□□□ 0.25
SYVN1-215ENST00000533685 MAP2P11137 1827 aaKnown RBP16.63■□□□□ 0.25
SYVN1-215ENST00000533685 HAP1P54257 671 aaPredicted RBP16.63■□□□□ 0.25
SYVN1-215ENST00000533685 CABLES1Q8TDN4 633 aa16.63■□□□□ 0.25
SYVN1-215ENST00000533685 KIAA0232Q92628 1395 aa16.63■□□□□ 0.25
SYVN1-215ENST00000533685 HOXC9P31274 260 aa16.62■□□□□ 0.25
SYVN1-215ENST00000533685 AMPHP49418 695 aa16.62■□□□□ 0.25
SYVN1-215ENST00000533685 PEAK1Q9H792 1746 aa16.62■□□□□ 0.25
SYVN1-215ENST00000533685 SOX12O15370 315 aa16.61■□□□□ 0.25
SYVN1-215ENST00000533685 FBLN1P23142 703 aa16.61■□□□□ 0.25
SYVN1-215ENST00000533685 MRS2Q9HD23 443 aa16.61■□□□□ 0.25
SYVN1-215ENST00000533685 PRDM11Q9NQV5 511 aa16.61■□□□□ 0.25
SYVN1-215ENST00000533685 LTN1O94822 1766 aa16.61■□□□□ 0.25
SYVN1-215ENST00000533685 LMO7Q8WWI1 1683 aa16.6■□□□□ 0.25
SYVN1-215ENST00000533685 ZC3H6P61129 1189 aaKnown RBP16.6■□□□□ 0.25
SYVN1-215ENST00000533685 COL18A1P39060 1754 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms