RNA–Protein interactions for RNA: ENST00000533678.1

RDX-214, Transcript of radixin, humanhuman

TSL 4

Gene RDX, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-214ENST00000533678 PPIP5K1Q6PFW1 1433 aa23.21■■□□□ 1.31
RDX-214ENST00000533678 SLC24A1O60721 1099 aa23.2■■□□□ 1.3
RDX-214ENST00000533678 FNBP4Q8N3X1 1017 aaPredicted RBP23.19■■□□□ 1.3
RDX-214ENST00000533678 SRCAPQ6ZRS2 3230 aa23.19■■□□□ 1.3
RDX-214ENST00000533678 BRD4O60885 1362 aaPredicted RBP23.18■■□□□ 1.3
RDX-214ENST00000533678 PAK3O75914 559 aaPredicted RBP23.18■■□□□ 1.3
RDX-214ENST00000533678 HAP1P54257 671 aaPredicted RBP23.18■■□□□ 1.3
RDX-214ENST00000533678 ABCA3Q99758 1704 aa23.16■■□□□ 1.3
RDX-214ENST00000533678 CABP1Q9NZU7 370 aa23.16■■□□□ 1.3
RDX-214ENST00000533678 USP21Q9UK80 565 aa23.14■■□□□ 1.29
RDX-214ENST00000533678 ATRNO75882 1429 aa23.14■■□□□ 1.29
RDX-214ENST00000533678 CABLES1Q8TDN4 633 aa23.13■■□□□ 1.29
RDX-214ENST00000533678 PUS7Q96PZ0 661 aaKnown RBP23.13■■□□□ 1.29
RDX-214ENST00000533678 EP400Q96L91 3159 aa23.13■■□□□ 1.29
RDX-214ENST00000533678 ZNF692Q9BU19 519 aaPredicted RBP23.12■■□□□ 1.29
RDX-214ENST00000533678 TRPC5Q9UL62 973 aaPredicted RBP23.11■■□□□ 1.29
RDX-214ENST00000533678 CRYBG1Q9Y4K1 1723 aa23.11■■□□□ 1.29
RDX-214ENST00000533678 ST20-MTHFSA0A0A6YYL1 179 aa23.1■■□□□ 1.29
RDX-214ENST00000533678 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.1■■□□□ 1.29
RDX-214ENST00000533678 AKAP12Q02952 1782 aa23.09■■□□□ 1.29
RDX-214ENST00000533678 USP6P35125 1406 aa23.08■■□□□ 1.29
RDX-214ENST00000533678 SLIT2O94813 1529 aa23.08■■□□□ 1.29
RDX-214ENST00000533678 NWD2Q9ULI1 1742 aa23.08■■□□□ 1.29
RDX-214ENST00000533678 ABTB2Q8N961 1025 aa23.08■■□□□ 1.29
RDX-214ENST00000533678 BCL9LQ86UU0 1499 aa23.08■■□□□ 1.29
RDX-214ENST00000533678 USP47Q96K76 1375 aa23.07■■□□□ 1.28
RDX-214ENST00000533678 TESK2Q96S53 571 aa23.07■■□□□ 1.28
RDX-214ENST00000533678 PLEKHG5O94827 1062 aa23.06■■□□□ 1.28
RDX-214ENST00000533678 UNC5CLQ8IV45 518 aa23.06■■□□□ 1.28
RDX-214ENST00000533678 NLRP13Q86W25 1043 aa23.05■■□□□ 1.28
RDX-214ENST00000533678 PHRF1Q9P1Y6 1649 aaKnown RBP23.04■■□□□ 1.28
RDX-214ENST00000533678 PLCH1Q4KWH8 1693 aa23.04■■□□□ 1.28
RDX-214ENST00000533678 CPSF1Q10570 1443 aaKnown RBP23.04■■□□□ 1.28
RDX-214ENST00000533678 SSH2Q76I76 1423 aa23.04■■□□□ 1.28
RDX-214ENST00000533678 COL14A1Q05707 1796 aaKnown RBP23.04■■□□□ 1.28
RDX-214ENST00000533678 FAM83GA6ND36 823 aa23.03■■□□□ 1.28
RDX-214ENST00000533678 ZRANB1Q9UGI0 708 aa23.03■■□□□ 1.28
RDX-214ENST00000533678 NINLQ9Y2I6 1382 aa23.01■■□□□ 1.27
RDX-214ENST00000533678 TMF1P82094 1093 aa23.01■■□□□ 1.27
RDX-214ENST00000533678 MON2Q7Z3U7 1717 aa23.01■■□□□ 1.27
RDX-214ENST00000533678 TTC21AQ8NDW8 1320 aa23.01■■□□□ 1.27
RDX-214ENST00000533678 NUTM2GQ5VZR2 741 aa23■■□□□ 1.27
RDX-214ENST00000533678 TMC1Q8TDI8 760 aa23■■□□□ 1.27
RDX-214ENST00000533678 USP19O94966 1318 aa23■■□□□ 1.27
RDX-214ENST00000533678 KTN1Q86UP2 1357 aaKnown RBP23■■□□□ 1.27
RDX-214ENST00000533678 CDCA8Q53HL2 280 aa22.99■■□□□ 1.27
RDX-214ENST00000533678 GJD4Q96KN9 370 aaPredicted RBP22.99■■□□□ 1.27
RDX-214ENST00000533678 HDGFL2Q7Z4V5 671 aaPredicted RBP22.98■■□□□ 1.27
RDX-214ENST00000533678 TERF2IPQ9NYB0 399 aa22.98■■□□□ 1.27
RDX-214ENST00000533678 TTC21BQ7Z4L5 1316 aa22.98■■□□□ 1.27
RDX-214ENST00000533678 GLI3P10071 1580 aa22.97■■□□□ 1.27
RDX-214ENST00000533678 NRKQ7Z2Y5 1582 aa22.97■■□□□ 1.27
RDX-214ENST00000533678 NLRP6P59044 892 aa22.97■■□□□ 1.27
RDX-214ENST00000533678 VPS72Q15906 364 aa22.97■■□□□ 1.27
RDX-214ENST00000533678 PRDM11Q9NQV5 511 aa22.97■■□□□ 1.27
RDX-214ENST00000533678 PIK3C2AO00443 1686 aa22.97■■□□□ 1.27
RDX-214ENST00000533678 SLC12A5Q9H2X9 1139 aa22.96■■□□□ 1.27
RDX-214ENST00000533678 CD163L1Q9NR16 1453 aa22.96■■□□□ 1.27
RDX-214ENST00000533678 NRAPQ86VF7 1730 aa22.96■■□□□ 1.27
RDX-214ENST00000533678 CPDO75976 1380 aa22.95■■□□□ 1.26
RDX-214ENST00000533678 GCP02774 474 aa22.95■■□□□ 1.26
RDX-214ENST00000533678 KIAA0232Q92628 1395 aa22.95■■□□□ 1.26
RDX-214ENST00000533678 BTG4Q9NY30 223 aa22.95■■□□□ 1.26
RDX-214ENST00000533678 CCDC125Q86Z20 511 aa22.94■■□□□ 1.26
RDX-214ENST00000533678 SLIT3O75094 1523 aa22.93■■□□□ 1.26
RDX-214ENST00000533678 BLMP54132 1417 aaPredicted RBP22.93■■□□□ 1.26
RDX-214ENST00000533678 ZC3H6P61129 1189 aaKnown RBP22.92■■□□□ 1.26
RDX-214ENST00000533678 EDC4Q6P2E9 1401 aaKnown RBP22.91■■□□□ 1.26
RDX-214ENST00000533678 KCNH5Q8NCM2 988 aa22.91■■□□□ 1.26
RDX-214ENST00000533678 BRWD3Q6RI45 1802 aa22.9■■□□□ 1.26
RDX-214ENST00000533678 EIF4G2P78344 907 aaKnown RBP eCLIP22.9■■□□□ 1.26
RDX-214ENST00000533678 A0A1W2PP64 1363 aa22.89■■□□□ 1.26
RDX-214ENST00000533678 CCDC9Q9Y3X0 531 aaKnown RBP22.89■■□□□ 1.25
RDX-214ENST00000533678 USP54Q70EL1 1684 aa22.89■■□□□ 1.25
RDX-214ENST00000533678 LRP5O75197 1615 aa22.89■■□□□ 1.25
RDX-214ENST00000533678 USP31Q70CQ4 1352 aa22.89■■□□□ 1.25
RDX-214ENST00000533678 ONECUT3O60422 494 aaPredicted RBP22.87■■□□□ 1.25
RDX-214ENST00000533678 CHRNA2Q15822 529 aa22.87■■□□□ 1.25
RDX-214ENST00000533678 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.86■■□□□ 1.25
RDX-214ENST00000533678 LMO7Q8WWI1 1683 aa22.86■■□□□ 1.25
RDX-214ENST00000533678 ANKRD36BQ8N2N9 1353 aa22.86■■□□□ 1.25
RDX-214ENST00000533678 EVA1CP58658 441 aa22.84■■□□□ 1.25
RDX-214ENST00000533678 AATKQ6ZMQ8 1374 aa22.84■■□□□ 1.25
RDX-214ENST00000533678 SPATA31A5Q5VU36 1347 aa22.83■■□□□ 1.25
RDX-214ENST00000533678 SPATA31A7Q8IWB4 1347 aa22.83■■□□□ 1.25
RDX-214ENST00000533678 CAMTA1Q9Y6Y1 1673 aa22.83■■□□□ 1.24
RDX-214ENST00000533678 NME9Q86XW9 330 aa22.82■■□□□ 1.24
RDX-214ENST00000533678 HSPA5P11021 654 aaKnown RBP22.81■■□□□ 1.24
RDX-214ENST00000533678 STRN4Q9NRL3 753 aa22.81■■□□□ 1.24
RDX-214ENST00000533678 ARHGEF25Q86VW2 580 aa22.8■■□□□ 1.24
RDX-214ENST00000533678 SEPT12Q8IYM1 358 aa22.8■■□□□ 1.24
RDX-214ENST00000533678 NFAT5O94916 1531 aa22.8■■□□□ 1.24
RDX-214ENST00000533678 COL18A1P39060 1754 aa22.8■■□□□ 1.24
RDX-214ENST00000533678 SPATA31A1Q5TZJ5 1347 aa22.8■■□□□ 1.24
RDX-214ENST00000533678 ABCC6O95255 1503 aa22.78■■□□□ 1.24
RDX-214ENST00000533678 SF3B2Q13435 895 aaKnown RBP22.78■■□□□ 1.24
RDX-214ENST00000533678 DEFB132Q7Z7B7 95 aa22.78■■□□□ 1.24
RDX-214ENST00000533678 MYOM1P52179 1685 aa22.77■■□□□ 1.24
RDX-214ENST00000533678 ZBTB7CA1YPR0 619 aa22.77■■□□□ 1.24
RDX-214ENST00000533678 COL5A2P05997 1499 aaPredicted RBP22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms