RNA–Protein interactions for RNA: ENST00000533395.5

FOXRED1-215, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 5

Gene FOXRED1, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-215ENST00000533395 POLR3AO14802 1390 aaPredicted RBP26.28■■□□□ 1.8
FOXRED1-215ENST00000533395 ABCA3Q99758 1704 aa26.25■■□□□ 1.79
FOXRED1-215ENST00000533395 ST20-MTHFSA0A0A6YYL1 179 aa26.25■■□□□ 1.79
FOXRED1-215ENST00000533395 RXRBP28702 533 aa26.25■■□□□ 1.79
FOXRED1-215ENST00000533395 SBNO2Q9Y2G9 1366 aa26.22■■□□□ 1.79
FOXRED1-215ENST00000533395 FNBP4Q8N3X1 1017 aaPredicted RBP26.21■■□□□ 1.79
FOXRED1-215ENST00000533395 ABTB2Q8N961 1025 aa26.21■■□□□ 1.79
FOXRED1-215ENST00000533395 ATAD2Q6PL18 1390 aa26.2■■□□□ 1.79
FOXRED1-215ENST00000533395 TMC1Q8TDI8 760 aa26.2■■□□□ 1.78
FOXRED1-215ENST00000533395 USP47Q96K76 1375 aa26.2■■□□□ 1.78
FOXRED1-215ENST00000533395 TRPC5Q9UL62 973 aaPredicted RBP26.18■■□□□ 1.78
FOXRED1-215ENST00000533395 RBM6P78332 1123 aaKnown RBP26.16■■□□□ 1.78
FOXRED1-215ENST00000533395 USP6P35125 1406 aa26.15■■□□□ 1.78
FOXRED1-215ENST00000533395 FAM83GA6ND36 823 aa26.15■■□□□ 1.78
FOXRED1-215ENST00000533395 BCL9LQ86UU0 1499 aa26.15■■□□□ 1.78
FOXRED1-215ENST00000533395 TESK2Q96S53 571 aa26.14■■□□□ 1.78
FOXRED1-215ENST00000533395 PLCH1Q4KWH8 1693 aa26.14■■□□□ 1.78
FOXRED1-215ENST00000533395 CRYBG1Q9Y4K1 1723 aa26.14■■□□□ 1.77
FOXRED1-215ENST00000533395 UNC5CLQ8IV45 518 aa26.13■■□□□ 1.77
FOXRED1-215ENST00000533395 PHRF1Q9P1Y6 1649 aaKnown RBP26.13■■□□□ 1.77
FOXRED1-215ENST00000533395 ZC3H6P61129 1189 aaKnown RBP26.12■■□□□ 1.77
FOXRED1-215ENST00000533395 ZNF692Q9BU19 519 aaPredicted RBP26.12■■□□□ 1.77
FOXRED1-215ENST00000533395 AKAP12Q02952 1782 aa26.12■■□□□ 1.77
FOXRED1-215ENST00000533395 KTN1Q86UP2 1357 aaKnown RBP26.11■■□□□ 1.77
FOXRED1-215ENST00000533395 SLIT2O94813 1529 aa26.11■■□□□ 1.77
FOXRED1-215ENST00000533395 NLRP13Q86W25 1043 aa26.11■■□□□ 1.77
FOXRED1-215ENST00000533395 SLC12A5Q9H2X9 1139 aa26.11■■□□□ 1.77
FOXRED1-215ENST00000533395 PRDM11Q9NQV5 511 aa26.11■■□□□ 1.77
FOXRED1-215ENST00000533395 CCDC9Q9Y3X0 531 aaKnown RBP26.11■■□□□ 1.77
FOXRED1-215ENST00000533395 ATRNO75882 1429 aa26.11■■□□□ 1.77
FOXRED1-215ENST00000533395 NLRP6P59044 892 aa26.1■■□□□ 1.77
FOXRED1-215ENST00000533395 BTG4Q9NY30 223 aa26.09■■□□□ 1.77
FOXRED1-215ENST00000533395 BRD4O60885 1362 aaPredicted RBP26.08■■□□□ 1.77
FOXRED1-215ENST00000533395 TMF1P82094 1093 aa26.08■■□□□ 1.77
FOXRED1-215ENST00000533395 CHRNA2Q15822 529 aa26.08■■□□□ 1.77
FOXRED1-215ENST00000533395 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.08■■□□□ 1.76
FOXRED1-215ENST00000533395 KIAA0232Q92628 1395 aa26.07■■□□□ 1.76
FOXRED1-215ENST00000533395 ZBTB7CA1YPR0 619 aa26.07■■□□□ 1.76
FOXRED1-215ENST00000533395 SLC24A1O60721 1099 aa26.07■■□□□ 1.76
FOXRED1-215ENST00000533395 HDGFL2Q7Z4V5 671 aaPredicted RBP26.07■■□□□ 1.76
FOXRED1-215ENST00000533395 TTC21BQ7Z4L5 1316 aa26.07■■□□□ 1.76
FOXRED1-215ENST00000533395 COL14A1Q05707 1796 aaKnown RBP26.07■■□□□ 1.76
FOXRED1-215ENST00000533395 RGS12O14924 1447 aa26.06■■□□□ 1.76
FOXRED1-215ENST00000533395 NWD2Q9ULI1 1742 aa26.06■■□□□ 1.76
FOXRED1-215ENST00000533395 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.06■■□□□ 1.76
FOXRED1-215ENST00000533395 GJD4Q96KN9 370 aaPredicted RBP26.06■■□□□ 1.76
FOXRED1-215ENST00000533395 CPSF1Q10570 1443 aaKnown RBP26.05■■□□□ 1.76
FOXRED1-215ENST00000533395 PIK3C2AO00443 1686 aa26.05■■□□□ 1.76
FOXRED1-215ENST00000533395 CDK12Q9NYV4 1490 aaPredicted RBP26.04■■□□□ 1.76
FOXRED1-215ENST00000533395 SSH2Q76I76 1423 aa26.04■■□□□ 1.76
FOXRED1-215ENST00000533395 NRKQ7Z2Y5 1582 aa26.03■■□□□ 1.76
FOXRED1-215ENST00000533395 MON2Q7Z3U7 1717 aa26.03■■□□□ 1.76
FOXRED1-215ENST00000533395 SOX12O15370 315 aa26.03■■□□□ 1.76
FOXRED1-215ENST00000533395 GCP02774 474 aa26.03■■□□□ 1.76
FOXRED1-215ENST00000533395 PUS7Q96PZ0 661 aaKnown RBP26.03■■□□□ 1.76
FOXRED1-215ENST00000533395 TERF2IPQ9NYB0 399 aa26.03■■□□□ 1.76
FOXRED1-215ENST00000533395 USP19O94966 1318 aa26.03■■□□□ 1.76
FOXRED1-215ENST00000533395 TTC21AQ8NDW8 1320 aa26.01■■□□□ 1.75
FOXRED1-215ENST00000533395 CD163L1Q9NR16 1453 aa26.01■■□□□ 1.75
FOXRED1-215ENST00000533395 VPS72Q15906 364 aa26■■□□□ 1.75
FOXRED1-215ENST00000533395 STRN4Q9NRL3 753 aa26■■□□□ 1.75
FOXRED1-215ENST00000533395 NRAPQ86VF7 1730 aa26■■□□□ 1.75
FOXRED1-215ENST00000533395 A0A1W2PP64 1363 aa25.99■■□□□ 1.75
FOXRED1-215ENST00000533395 GLI3P10071 1580 aa25.99■■□□□ 1.75
FOXRED1-215ENST00000533395 POLR3GLQ9BT43 218 aa25.98■■□□□ 1.75
FOXRED1-215ENST00000533395 ZRANB1Q9UGI0 708 aa25.98■■□□□ 1.75
FOXRED1-215ENST00000533395 A0A0G2JS52 829 aa25.97■■□□□ 1.75
FOXRED1-215ENST00000533395 EIF4G2P78344 907 aaKnown RBP eCLIP25.97■■□□□ 1.75
FOXRED1-215ENST00000533395 MYT1Q01538 1121 aa25.97■■□□□ 1.75
FOXRED1-215ENST00000533395 CDCA8Q53HL2 280 aa25.97■■□□□ 1.75
FOXRED1-215ENST00000533395 NME9Q86XW9 330 aa25.97■■□□□ 1.75
FOXRED1-215ENST00000533395 HSPA5P11021 654 aaKnown RBP25.96■■□□□ 1.75
FOXRED1-215ENST00000533395 EVA1CP58658 441 aa25.96■■□□□ 1.75
FOXRED1-215ENST00000533395 NINLQ9Y2I6 1382 aa25.95■■□□□ 1.75
FOXRED1-215ENST00000533395 SLIT3O75094 1523 aa25.94■■□□□ 1.74
FOXRED1-215ENST00000533395 EDC4Q6P2E9 1401 aaKnown RBP25.94■■□□□ 1.74
FOXRED1-215ENST00000533395 CPDO75976 1380 aa25.93■■□□□ 1.74
FOXRED1-215ENST00000533395 FAM98CQ17RN3 349 aaKnown RBP25.91■■□□□ 1.74
FOXRED1-215ENST00000533395 KCNH5Q8NCM2 988 aa25.91■■□□□ 1.74
FOXRED1-215ENST00000533395 SEPT12Q8IYM1 358 aa25.9■■□□□ 1.74
FOXRED1-215ENST00000533395 USP35Q9P2H5 1018 aa25.9■■□□□ 1.74
FOXRED1-215ENST00000533395 CAMTA1Q9Y6Y1 1673 aa25.9■■□□□ 1.74
FOXRED1-215ENST00000533395 ANKRD36BQ8N2N9 1353 aa25.88■■□□□ 1.73
FOXRED1-215ENST00000533395 SPATA31A5Q5VU36 1347 aa25.88■■□□□ 1.73
FOXRED1-215ENST00000533395 SPATA31A7Q8IWB4 1347 aa25.88■■□□□ 1.73
FOXRED1-215ENST00000533395 LMO7Q8WWI1 1683 aa25.87■■□□□ 1.73
FOXRED1-215ENST00000533395 UPF1Q92900 1129 aaKnown RBP eCLIP25.87■■□□□ 1.73
FOXRED1-215ENST00000533395 LARP1Q6PKG0 1096 aaKnown RBP25.86■■□□□ 1.73
FOXRED1-215ENST00000533395 BRWD3Q6RI45 1802 aa25.86■■□□□ 1.73
FOXRED1-215ENST00000533395 USP31Q70CQ4 1352 aa25.85■■□□□ 1.73
FOXRED1-215ENST00000533395 MYOM1P52179 1685 aa25.83■■□□□ 1.73
FOXRED1-215ENST00000533395 AATKQ6ZMQ8 1374 aa25.83■■□□□ 1.73
FOXRED1-215ENST00000533395 ARHGEF25Q86VW2 580 aa25.83■■□□□ 1.73
FOXRED1-215ENST00000533395 SPATA31A1Q5TZJ5 1347 aa25.83■■□□□ 1.73
FOXRED1-215ENST00000533395 NFAT5O94916 1531 aa25.83■■□□□ 1.72
FOXRED1-215ENST00000533395 COL5A2P05997 1499 aaPredicted RBP25.81■■□□□ 1.72
FOXRED1-215ENST00000533395 COG3Q96JB2 828 aa25.81■■□□□ 1.72
FOXRED1-215ENST00000533395 AXIN2Q9Y2T1 843 aa25.81■■□□□ 1.72
FOXRED1-215ENST00000533395 RGPD5Q99666 1765 aa25.81■■□□□ 1.72
FOXRED1-215ENST00000533395 USP54Q70EL1 1684 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms