RNA–Protein interactions for RNA: ENST00000533155.5

NCAPD3-210, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 3

Gene NCAPD3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-210ENST00000533155 UNC5CLQ8IV45 518 aa24.58■■□□□ 1.53
NCAPD3-210ENST00000533155 ACEP12821 1306 aa24.58■■□□□ 1.52
NCAPD3-210ENST00000533155 CABP2Q9NPB3 220 aa24.57■■□□□ 1.52
NCAPD3-210ENST00000533155 EVC2Q86UK5 1308 aa24.56■■□□□ 1.52
NCAPD3-210ENST00000533155 PPIP5K1Q6PFW1 1433 aa24.55■■□□□ 1.52
NCAPD3-210ENST00000533155 NWD2Q9ULI1 1742 aa24.53■■□□□ 1.52
NCAPD3-210ENST00000533155 GJD4Q96KN9 370 aaPredicted RBP24.53■■□□□ 1.52
NCAPD3-210ENST00000533155 CARD11Q9BXL7 1154 aa24.53■■□□□ 1.52
NCAPD3-210ENST00000533155 RALGAPBQ86X10 1494 aa24.52■■□□□ 1.52
NCAPD3-210ENST00000533155 PLCH1Q4KWH8 1693 aa24.52■■□□□ 1.52
NCAPD3-210ENST00000533155 UPF1Q92900 1129 aaKnown RBP eCLIP24.5■■□□□ 1.51
NCAPD3-210ENST00000533155 CRYBG1Q9Y4K1 1723 aa24.49■■□□□ 1.51
NCAPD3-210ENST00000533155 FAM83GA6ND36 823 aa24.49■■□□□ 1.51
NCAPD3-210ENST00000533155 BRD4O60885 1362 aaPredicted RBP24.49■■□□□ 1.51
NCAPD3-210ENST00000533155 CABP1Q9NZU7 370 aa24.48■■□□□ 1.51
NCAPD3-210ENST00000533155 COL14A1Q05707 1796 aaKnown RBP24.47■■□□□ 1.51
NCAPD3-210ENST00000533155 SBNO2Q9Y2G9 1366 aa24.47■■□□□ 1.51
NCAPD3-210ENST00000533155 VPS72Q15906 364 aa24.47■■□□□ 1.51
NCAPD3-210ENST00000533155 PCGF6Q9BYE7 350 aa24.47■■□□□ 1.51
NCAPD3-210ENST00000533155 ATAD2Q6PL18 1390 aa24.45■■□□□ 1.5
NCAPD3-210ENST00000533155 ABTB2Q8N961 1025 aa24.45■■□□□ 1.5
NCAPD3-210ENST00000533155 PRDM11Q9NQV5 511 aa24.44■■□□□ 1.5
NCAPD3-210ENST00000533155 CCDC9Q9Y3X0 531 aaKnown RBP24.44■■□□□ 1.5
NCAPD3-210ENST00000533155 GLI3P10071 1580 aa24.44■■□□□ 1.5
NCAPD3-210ENST00000533155 PHRF1Q9P1Y6 1649 aaKnown RBP24.43■■□□□ 1.5
NCAPD3-210ENST00000533155 NUTM2GQ5VZR2 741 aa24.43■■□□□ 1.5
NCAPD3-210ENST00000533155 BTG4Q9NY30 223 aa24.43■■□□□ 1.5
NCAPD3-210ENST00000533155 USP6P35125 1406 aa24.43■■□□□ 1.5
NCAPD3-210ENST00000533155 NLRP13Q86W25 1043 aa24.41■■□□□ 1.5
NCAPD3-210ENST00000533155 NRAPQ86VF7 1730 aa24.41■■□□□ 1.5
NCAPD3-210ENST00000533155 KIAA0232Q92628 1395 aa24.4■■□□□ 1.5
NCAPD3-210ENST00000533155 CLSPNQ9HAW4 1339 aa24.39■■□□□ 1.5
NCAPD3-210ENST00000533155 ZNF692Q9BU19 519 aaPredicted RBP24.39■■□□□ 1.49
NCAPD3-210ENST00000533155 USP19O94966 1318 aa24.38■■□□□ 1.49
NCAPD3-210ENST00000533155 TIMELESSQ9UNS1 1208 aa24.37■■□□□ 1.49
NCAPD3-210ENST00000533155 NRKQ7Z2Y5 1582 aa24.37■■□□□ 1.49
NCAPD3-210ENST00000533155 ZC3H6P61129 1189 aaKnown RBP24.36■■□□□ 1.49
NCAPD3-210ENST00000533155 AKAP12Q02952 1782 aa24.35■■□□□ 1.49
NCAPD3-210ENST00000533155 ONECUT3O60422 494 aaPredicted RBP24.35■■□□□ 1.49
NCAPD3-210ENST00000533155 SEPT12Q8IYM1 358 aa24.35■■□□□ 1.49
NCAPD3-210ENST00000533155 SSH2Q76I76 1423 aa24.35■■□□□ 1.49
NCAPD3-210ENST00000533155 CPDO75976 1380 aa24.34■■□□□ 1.49
NCAPD3-210ENST00000533155 SLC24A1O60721 1099 aa24.33■■□□□ 1.49
NCAPD3-210ENST00000533155 GCP02774 474 aa24.33■■□□□ 1.49
NCAPD3-210ENST00000533155 NLRP6P59044 892 aa24.33■■□□□ 1.49
NCAPD3-210ENST00000533155 CHRNA2Q15822 529 aa24.33■■□□□ 1.49
NCAPD3-210ENST00000533155 CPSF1Q10570 1443 aaKnown RBP24.32■■□□□ 1.48
NCAPD3-210ENST00000533155 ST20-MTHFSA0A0A6YYL1 179 aa24.31■■□□□ 1.48
NCAPD3-210ENST00000533155 PUS7Q96PZ0 661 aaKnown RBP24.31■■□□□ 1.48
NCAPD3-210ENST00000533155 SPATA31A5Q5VU36 1347 aa24.31■■□□□ 1.48
NCAPD3-210ENST00000533155 SPATA31A7Q8IWB4 1347 aa24.31■■□□□ 1.48
NCAPD3-210ENST00000533155 TTC21AQ8NDW8 1320 aa24.31■■□□□ 1.48
NCAPD3-210ENST00000533155 KTN1Q86UP2 1357 aaKnown RBP24.3■■□□□ 1.48
NCAPD3-210ENST00000533155 A0A0G2JS52 829 aa24.3■■□□□ 1.48
NCAPD3-210ENST00000533155 MYT1Q01538 1121 aa24.3■■□□□ 1.48
NCAPD3-210ENST00000533155 BRWD3Q6RI45 1802 aa24.3■■□□□ 1.48
NCAPD3-210ENST00000533155 TTC21BQ7Z4L5 1316 aa24.3■■□□□ 1.48
NCAPD3-210ENST00000533155 CCDC125Q86Z20 511 aa24.29■■□□□ 1.48
NCAPD3-210ENST00000533155 PIK3C2AO00443 1686 aa24.29■■□□□ 1.48
NCAPD3-210ENST00000533155 FAM98CQ17RN3 349 aaKnown RBP24.28■■□□□ 1.48
NCAPD3-210ENST00000533155 TMC1Q8TDI8 760 aa24.28■■□□□ 1.48
NCAPD3-210ENST00000533155 STRN4Q9NRL3 753 aa24.28■■□□□ 1.48
NCAPD3-210ENST00000533155 SLIT3O75094 1523 aa24.28■■□□□ 1.48
NCAPD3-210ENST00000533155 EVA1CP58658 441 aa24.27■■□□□ 1.48
NCAPD3-210ENST00000533155 TESK2Q96S53 571 aa24.27■■□□□ 1.48
NCAPD3-210ENST00000533155 KRT27Q7Z3Y8 459 aa24.26■■□□□ 1.47
NCAPD3-210ENST00000533155 LMO7Q8WWI1 1683 aa24.25■■□□□ 1.47
NCAPD3-210ENST00000533155 MON2Q7Z3U7 1717 aa24.25■■□□□ 1.47
NCAPD3-210ENST00000533155 HDGFL2Q7Z4V5 671 aaPredicted RBP24.25■■□□□ 1.47
NCAPD3-210ENST00000533155 CCER1Q8TC90 406 aaPredicted RBP24.25■■□□□ 1.47
NCAPD3-210ENST00000533155 SPATA31A1Q5TZJ5 1347 aa24.25■■□□□ 1.47
NCAPD3-210ENST00000533155 KCNH5Q8NCM2 988 aa24.24■■□□□ 1.47
NCAPD3-210ENST00000533155 SLC12A5Q9H2X9 1139 aa24.24■■□□□ 1.47
NCAPD3-210ENST00000533155 CAMTA1Q9Y6Y1 1673 aa24.24■■□□□ 1.47
NCAPD3-210ENST00000533155 TERF2IPQ9NYB0 399 aa24.23■■□□□ 1.47
NCAPD3-210ENST00000533155 USP47Q96K76 1375 aa24.23■■□□□ 1.47
NCAPD3-210ENST00000533155 NINLQ9Y2I6 1382 aa24.23■■□□□ 1.47
NCAPD3-210ENST00000533155 CD163L1Q9NR16 1453 aa24.21■■□□□ 1.47
NCAPD3-210ENST00000533155 AATKQ6ZMQ8 1374 aa24.21■■□□□ 1.47
NCAPD3-210ENST00000533155 THSD7AQ9UPZ6 1657 aa24.21■■□□□ 1.47
NCAPD3-210ENST00000533155 BLMP54132 1417 aaPredicted RBP24.2■■□□□ 1.46
NCAPD3-210ENST00000533155 ZBTB7CA1YPR0 619 aa24.2■■□□□ 1.46
NCAPD3-210ENST00000533155 EP400Q96L91 3159 aa24.19■■□□□ 1.46
NCAPD3-210ENST00000533155 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.19■■□□□ 1.46
NCAPD3-210ENST00000533155 COL5A2P05997 1499 aaPredicted RBP24.19■■□□□ 1.46
NCAPD3-210ENST00000533155 EDC4Q6P2E9 1401 aaKnown RBP24.18■■□□□ 1.46
NCAPD3-210ENST00000533155 TMF1P82094 1093 aa24.18■■□□□ 1.46
NCAPD3-210ENST00000533155 LARP1Q6PKG0 1096 aaKnown RBP24.18■■□□□ 1.46
NCAPD3-210ENST00000533155 USP35Q9P2H5 1018 aa24.18■■□□□ 1.46
NCAPD3-210ENST00000533155 SF3B2Q13435 895 aaKnown RBP24.17■■□□□ 1.46
NCAPD3-210ENST00000533155 BARGINQ6ZT62 677 aa24.17■■□□□ 1.46
NCAPD3-210ENST00000533155 A0A1W2PP64 1363 aa24.16■■□□□ 1.46
NCAPD3-210ENST00000533155 USP31Q70CQ4 1352 aa24.16■■□□□ 1.46
NCAPD3-210ENST00000533155 TCP11L2Q8N4U5 519 aa24.16■■□□□ 1.46
NCAPD3-210ENST00000533155 THRAP3Q9Y2W1 955 aaKnown RBP24.16■■□□□ 1.46
NCAPD3-210ENST00000533155 ARHGEF25Q86VW2 580 aa24.15■■□□□ 1.46
NCAPD3-210ENST00000533155 USP54Q70EL1 1684 aa24.15■■□□□ 1.46
NCAPD3-210ENST00000533155 SOX12O15370 315 aa24.14■■□□□ 1.45
NCAPD3-210ENST00000533155 CRB1P82279 1406 aa24.14■■□□□ 1.45
NCAPD3-210ENST00000533155 COL18A1P39060 1754 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms