RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 FANCAO15360 1455 aa8.41□□□□□ -1.06
TGFBR3-210ENST00000533089 GTF2F1P35269 517 aaKnown RBP eCLIP8.41□□□□□ -1.062e-6■□□□□ 9.9
TGFBR3-210ENST00000533089 MRVI1Q9Y6F6 885 aa8.41□□□□□ -1.06
TGFBR3-210ENST00000533089 DHX57Q6P158 1386 aaKnown RBP8.41□□□□□ -1.06
TGFBR3-210ENST00000533089 ZNF622Q969S3 477 aaKnown RBP eCLIP8.41□□□□□ -1.064e-6■■□□□ 13.5
TGFBR3-210ENST00000533089 KIAA0556O60303 1618 aa8.41□□□□□ -1.06
TGFBR3-210ENST00000533089 TMCO5BA8MYB1 307 aa8.41□□□□□ -1.06
TGFBR3-210ENST00000533089 ABCC2Q92887 1545 aa8.4□□□□□ -1.06
TGFBR3-210ENST00000533089 TPD52L1Q16890 204 aaPredicted RBP8.4□□□□□ -1.06
TGFBR3-210ENST00000533089 CLUAP1Q96AJ1 413 aa8.4□□□□□ -1.06
TGFBR3-210ENST00000533089 RBM28Q9NW13 759 aaKnown RBP8.4□□□□□ -1.06
TGFBR3-210ENST00000533089 TCEAL9Q9UHQ7 104 aa8.4□□□□□ -1.06
TGFBR3-210ENST00000533089 TRAK1Q9UPV9 953 aa8.4□□□□□ -1.06
TGFBR3-210ENST00000533089 KIAA0754O94854 1291 aa8.4□□□□□ -1.06
TGFBR3-210ENST00000533089 TPM3P06753 285 aa8.4□□□□□ -1.07
TGFBR3-210ENST00000533089 ZSCAN30Q86W11 494 aa8.4□□□□□ -1.07
TGFBR3-210ENST00000533089 CWC22Q9HCG8 908 aaKnown RBP8.4□□□□□ -1.07
TGFBR3-210ENST00000533089 PES1O00541 588 aaKnown RBP8.39□□□□□ -1.07
TGFBR3-210ENST00000533089 NBPF1Q3BBV0 1214 aa8.39□□□□□ -1.07
TGFBR3-210ENST00000533089 ATP10BO94823 1461 aa8.39□□□□□ -1.07
TGFBR3-210ENST00000533089 CAMSAP2Q08AD1 1489 aa8.39□□□□□ -1.07
TGFBR3-210ENST00000533089 PLCH2O75038 1416 aa8.39□□□□□ -1.07
TGFBR3-210ENST00000533089 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.39□□□□□ -1.07
TGFBR3-210ENST00000533089 NOL10Q9BSC4 688 aaKnown RBP8.39□□□□□ -1.07
TGFBR3-210ENST00000533089 RAPGEF6Q8TEU7 1601 aa8.39□□□□□ -1.07
TGFBR3-210ENST00000533089 RNF214Q8ND24 703 aa8.38□□□□□ -1.07
TGFBR3-210ENST00000533089 NUP153P49790 1475 aaKnown RBP8.38□□□□□ -1.07
TGFBR3-210ENST00000533089 MNAT1P51948 309 aa8.38□□□□□ -1.07
TGFBR3-210ENST00000533089 PMFBP1Q8TBY8 1022 aa8.38□□□□□ -1.07
TGFBR3-210ENST00000533089 RUFY1Q96T51 708 aa8.38□□□□□ -1.07
TGFBR3-210ENST00000533089 EVC2Q86UK5 1308 aa8.38□□□□□ -1.07
TGFBR3-210ENST00000533089 IGSF3O75054 1194 aa8.38□□□□□ -1.07
TGFBR3-210ENST00000533089 CLCN1P35523 988 aa8.37□□□□□ -1.07
TGFBR3-210ENST00000533089 CPSF2Q9P2I0 782 aaKnown RBP8.37□□□□□ -1.07
TGFBR3-210ENST00000533089 TARBP1Q13395 1621 aaKnown RBP8.37□□□□□ -1.07
TGFBR3-210ENST00000533089 GOLGA6L19H0YKK7 550 aa8.37□□□□□ -1.07
TGFBR3-210ENST00000533089 DYNC1I1O14576 645 aa8.37□□□□□ -1.07
TGFBR3-210ENST00000533089 RALBP1Q15311 655 aa8.37□□□□□ -1.07
TGFBR3-210ENST00000533089 TTC5Q8N0Z6 440 aa8.37□□□□□ -1.07
TGFBR3-210ENST00000533089 SF3A1Q15459 793 aaKnown RBP8.37□□□□□ -1.07
TGFBR3-210ENST00000533089 FOXD4L6Q3SYB3 417 aaPredicted RBP8.37□□□□□ -1.07
TGFBR3-210ENST00000533089 FOXD4L3Q6VB84 417 aaPredicted RBP8.37□□□□□ -1.07
TGFBR3-210ENST00000533089 CCDC70Q6NSX1 233 aa8.37□□□□□ -1.07
TGFBR3-210ENST00000533089 TXNDC2Q86VQ3 553 aa8.37□□□□□ -1.07
TGFBR3-210ENST00000533089 RPGRIP1LQ68CZ1 1315 aa8.37□□□□□ -1.07
TGFBR3-210ENST00000533089 CEP170Q5SW79 1584 aa8.37□□□□□ -1.07
TGFBR3-210ENST00000533089 XPCQ01831 940 aaPredicted RBP8.37□□□□□ -1.07
TGFBR3-210ENST00000533089 AMOTL1Q8IY63 956 aa8.37□□□□□ -1.07
TGFBR3-210ENST00000533089 CCDC94Q9BW85 323 aaPredicted RBP8.37□□□□□ -1.07
TGFBR3-210ENST00000533089 AKAP17AQ02040 695 aaKnown RBP8.36□□□□□ -1.07
TGFBR3-210ENST00000533089 CCDC91Q7Z6B0 441 aa8.36□□□□□ -1.07
TGFBR3-210ENST00000533089 RRP7AQ9Y3A4 280 aaKnown RBP8.36□□□□□ -1.07
TGFBR3-210ENST00000533089 DNAAF4Q8WXU2 420 aa8.36□□□□□ -1.07
TGFBR3-210ENST00000533089 ELL2O00472 640 aaPredicted RBP8.36□□□□□ -1.07
TGFBR3-210ENST00000533089 MCTP1Q6DN14 999 aa8.36□□□□□ -1.07
TGFBR3-210ENST00000533089 ANKLE2Q86XL3 938 aa8.36□□□□□ -1.07
TGFBR3-210ENST00000533089 MPNDQ8N594 471 aa8.36□□□□□ -1.07
TGFBR3-210ENST00000533089 CCDC112Q8NEF3 446 aa8.36□□□□□ -1.07
TGFBR3-210ENST00000533089 RILPL2Q969X0 211 aa8.36□□□□□ -1.07
TGFBR3-210ENST00000533089 COG3Q96JB2 828 aa8.36□□□□□ -1.07
TGFBR3-210ENST00000533089 DCAF8L1A6NGE4 600 aa8.35□□□□□ -1.07
TGFBR3-210ENST00000533089 KIF20AO95235 890 aa8.35□□□□□ -1.07
TGFBR3-210ENST00000533089 DCTN1Q14203 1278 aa8.35□□□□□ -1.07
TGFBR3-210ENST00000533089 VPS37DQ86XT2 251 aa8.35□□□□□ -1.07
TGFBR3-210ENST00000533089 PPP1R1BQ9UD71 204 aaPredicted RBP8.35□□□□□ -1.07
TGFBR3-210ENST00000533089 EIF2S2P20042 333 aaKnown RBP8.35□□□□□ -1.07
TGFBR3-210ENST00000533089 NF2P35240 595 aa8.35□□□□□ -1.07
TGFBR3-210ENST00000533089 TEFQ10587 303 aa8.35□□□□□ -1.07
TGFBR3-210ENST00000533089 CTR9Q6PD62 1173 aa8.35□□□□□ -1.07
TGFBR3-210ENST00000533089 H3BQV1 296 aa8.35□□□□□ -1.07
TGFBR3-210ENST00000533089 DHX16O60231 1041 aaKnown RBP8.35□□□□□ -1.07
TGFBR3-210ENST00000533089 IFFO2Q5TF58 517 aa8.35□□□□□ -1.07
TGFBR3-210ENST00000533089 EXOC6Q8TAG9 804 aa8.35□□□□□ -1.07
TGFBR3-210ENST00000533089 MINK1Q8N4C8 1332 aaPredicted RBP8.35□□□□□ -1.07
TGFBR3-210ENST00000533089 KIAA1107Q9UPP5 1409 aa8.35□□□□□ -1.07
TGFBR3-210ENST00000533089 C11orf95C9JLR9 678 aaPredicted RBP8.35□□□□□ -1.07
TGFBR3-210ENST00000533089 CENPJQ9HC77 1338 aaPredicted RBP8.34□□□□□ -1.07
TGFBR3-210ENST00000533089 DISP1Q96F81 1524 aa8.34□□□□□ -1.07
TGFBR3-210ENST00000533089 DHX29Q7Z478 1369 aaKnown RBP8.34□□□□□ -1.07
TGFBR3-210ENST00000533089 SETSIPP0DME0 302 aa8.34□□□□□ -1.07
TGFBR3-210ENST00000533089 NAP1L1P55209 391 aaKnown RBP8.34□□□□□ -1.07
TGFBR3-210ENST00000533089 NECTIN2Q92692 538 aa8.34□□□□□ -1.07
TGFBR3-210ENST00000533089 TMX1Q9H3N1 280 aa8.34□□□□□ -1.07
TGFBR3-210ENST00000533089 ATF3P18847 181 aa8.34□□□□□ -1.07
TGFBR3-210ENST00000533089 PPM1FP49593 454 aaPredicted RBP8.34□□□□□ -1.07
TGFBR3-210ENST00000533089 PSME1Q06323 249 aa8.34□□□□□ -1.07
TGFBR3-210ENST00000533089 DDX11Q96FC9 970 aa8.34□□□□□ -1.07
TGFBR3-210ENST00000533089 LRCH2Q5VUJ6 765 aa8.34□□□□□ -1.07
TGFBR3-210ENST00000533089 INCENPQ9NQS7 918 aa8.34□□□□□ -1.07
TGFBR3-210ENST00000533089 ABCC5O15440 1437 aa8.34□□□□□ -1.07
TGFBR3-210ENST00000533089 POLR3GO15318 223 aaPredicted RBP8.34□□□□□ -1.08
TGFBR3-210ENST00000533089 PBRM1Q86U86 1689 aa8.34□□□□□ -1.08
TGFBR3-210ENST00000533089 GPATCH8Q9UKJ3 1502 aaKnown RBP8.34□□□□□ -1.08
TGFBR3-210ENST00000533089 BECN2A8MW95 431 aa8.33□□□□□ -1.08
TGFBR3-210ENST00000533089 SYNE3Q6ZMZ3 975 aa8.33□□□□□ -1.08
TGFBR3-210ENST00000533089 PIK3R5Q8WYR1 880 aa8.33□□□□□ -1.08
TGFBR3-210ENST00000533089 MYCBPQ99417 103 aaPredicted RBP8.33□□□□□ -1.08
TGFBR3-210ENST00000533089 ZNF518AQ6AHZ1 1483 aa8.33□□□□□ -1.08
TGFBR3-210ENST00000533089 CAVIN1Q6NZI2 390 aaKnown RBP8.33□□□□□ -1.08
TGFBR3-210ENST00000533089 DRC1Q96MC2 740 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms