RNA–Protein interactions for RNA: ENST00000533063.5

GSDMD-212, Transcript of gasdermin D, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSDMD, Length 1,800 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-212ENST00000533063 NGDNQ8NEJ9 315 aaKnown RBP27.45■■□□□ 1.98
GSDMD-212ENST00000533063 TTC21BQ7Z4L5 1316 aa27.45■■□□□ 1.98
GSDMD-212ENST00000533063 PHF8Q9UPP1 1060 aa27.44■■□□□ 1.98
GSDMD-212ENST00000533063 TNNT2P45379 298 aaPredicted RBP27.43■■□□□ 1.98
GSDMD-212ENST00000533063 ORAI2Q96SN7 254 aa27.43■■□□□ 1.98
GSDMD-212ENST00000533063 ESCO1Q5FWF5 840 aa27.42■■□□□ 1.98
GSDMD-212ENST00000533063 ZRANB1Q9UGI0 708 aa27.42■■□□□ 1.98
GSDMD-212ENST00000533063 FAM9BQ8IZU0 186 aa27.41■■□□□ 1.98
GSDMD-212ENST00000533063 MSH6P52701 1360 aa27.41■■□□□ 1.98
GSDMD-212ENST00000533063 ATF3P18847 181 aa27.4■■□□□ 1.98
GSDMD-212ENST00000533063 PIK3C2AO00443 1686 aa27.4■■□□□ 1.98
GSDMD-212ENST00000533063 KIF1AQ12756 1690 aa27.38■■□□□ 1.97
GSDMD-212ENST00000533063 CADPS2Q86UW7 1296 aa27.38■■□□□ 1.97
GSDMD-212ENST00000533063 LTBP4Q8N2S1 1624 aa27.37■■□□□ 1.97
GSDMD-212ENST00000533063 OVOS2A0A0J9YW53 1432 aa27.37■■□□□ 1.97
GSDMD-212ENST00000533063 OVOS2Q6IE36 1432 aa27.37■■□□□ 1.97
GSDMD-212ENST00000533063 MARF1Q9Y4F3 1742 aaKnown RBP27.36■■□□□ 1.97
GSDMD-212ENST00000533063 TTC21AQ8NDW8 1320 aa27.35■■□□□ 1.97
GSDMD-212ENST00000533063 MAP2P11137 1827 aaKnown RBP27.35■■□□□ 1.97
GSDMD-212ENST00000533063 MTHFSP49914 203 aa27.33■■□□□ 1.97
GSDMD-212ENST00000533063 USP54Q70EL1 1684 aa27.33■■□□□ 1.97
GSDMD-212ENST00000533063 SCAF1Q9H7N4 1312 aaKnown RBP27.33■■□□□ 1.97
GSDMD-212ENST00000533063 FBLN1P23142 703 aa27.32■■□□□ 1.96
GSDMD-212ENST00000533063 SHPRHQ149N8 1683 aa27.32■■□□□ 1.96
GSDMD-212ENST00000533063 TRPM3Q9HCF6 1732 aaPredicted RBP27.32■■□□□ 1.96
GSDMD-212ENST00000533063 FOXO3O43524 673 aa27.31■■□□□ 1.96
GSDMD-212ENST00000533063 COG3Q96JB2 828 aa27.31■■□□□ 1.96
GSDMD-212ENST00000533063 USP31Q70CQ4 1352 aa27.3■■□□□ 1.96
GSDMD-212ENST00000533063 PSME1Q06323 249 aa27.27■■□□□ 1.96
GSDMD-212ENST00000533063 AATKQ6ZMQ8 1374 aa27.27■■□□□ 1.96
GSDMD-212ENST00000533063 POLKQ9UBT6 870 aa27.26■■□□□ 1.95
GSDMD-212ENST00000533063 COL3A1P02461 1466 aaPredicted RBP27.26■■□□□ 1.95
GSDMD-212ENST00000533063 SMG6Q86US8 1419 aaKnown RBP27.25■■□□□ 1.95
GSDMD-212ENST00000533063 XPCQ01831 940 aaPredicted RBP27.25■■□□□ 1.95
GSDMD-212ENST00000533063 PNPLA6Q8IY17 1366 aa27.23■■□□□ 1.95
GSDMD-212ENST00000533063 PAK3O75914 559 aaPredicted RBP27.23■■□□□ 1.95
GSDMD-212ENST00000533063 HNRNPUQ00839 825 aaKnown RBP eCLIP27.23■■□□□ 1.95
GSDMD-212ENST00000533063 SLAIN2Q9P270 581 aa27.23■■□□□ 1.95
GSDMD-212ENST00000533063 ADAMTS8Q9UP79 889 aa27.23■■□□□ 1.95
GSDMD-212ENST00000533063 BRINP3Q76B58 766 aa27.22■■□□□ 1.95
GSDMD-212ENST00000533063 DDX17Q92841 729 aaKnown RBP27.22■■□□□ 1.95
GSDMD-212ENST00000533063 ALS2Q96Q42 1657 aa27.21■■□□□ 1.95
GSDMD-212ENST00000533063 ABTB2Q8N961 1025 aa27.21■■□□□ 1.95
GSDMD-212ENST00000533063 INSRP06213 1382 aa27.21■■□□□ 1.95
GSDMD-212ENST00000533063 AEBP2Q6ZN18 517 aaPredicted RBP27.2■■□□□ 1.95
GSDMD-212ENST00000533063 EMILIN1Q9Y6C2 1016 aa27.2■■□□□ 1.95
GSDMD-212ENST00000533063 BLMP54132 1417 aaPredicted RBP27.2■■□□□ 1.95
GSDMD-212ENST00000533063 NLRP6P59044 892 aa27.2■■□□□ 1.94
GSDMD-212ENST00000533063 NUTM2GQ5VZR2 741 aa27.2■■□□□ 1.94
GSDMD-212ENST00000533063 KRT28Q7Z3Y7 464 aa27.2■■□□□ 1.94
GSDMD-212ENST00000533063 RRS1Q15050 365 aaKnown RBP27.19■■□□□ 1.94
GSDMD-212ENST00000533063 PXDNQ92626 1479 aa27.19■■□□□ 1.94
GSDMD-212ENST00000533063 PEAK1Q9H792 1746 aa27.19■■□□□ 1.94
GSDMD-212ENST00000533063 CFAP53Q96M91 514 aa27.17■■□□□ 1.94
GSDMD-212ENST00000533063 CDK12Q9NYV4 1490 aaPredicted RBP27.17■■□□□ 1.94
GSDMD-212ENST00000533063 WDR43Q15061 677 aaKnown RBP eCLIP27.16■■□□□ 1.94
GSDMD-212ENST00000533063 NPHP3Q7Z494 1330 aa27.15■■□□□ 1.94
GSDMD-212ENST00000533063 CENPBP07199 599 aaPredicted RBP27.13■■□□□ 1.93
GSDMD-212ENST00000533063 PPM1GO15355 546 aaPredicted RBP27.12■■□□□ 1.93
GSDMD-212ENST00000533063 NFAT5O94916 1531 aa27.12■■□□□ 1.93
GSDMD-212ENST00000533063 SBNO1A3KN83 1393 aa27.12■■□□□ 1.93
GSDMD-212ENST00000533063 NHSL1Q5SYE7 1610 aa27.12■■□□□ 1.93
GSDMD-212ENST00000533063 SOX12O15370 315 aa27.11■■□□□ 1.93
GSDMD-212ENST00000533063 SENP3-EIF4A1A0A087X0R7 540 aa27.11■■□□□ 1.93
GSDMD-212ENST00000533063 SLIT3O75094 1523 aa27.1■■□□□ 1.93
GSDMD-212ENST00000533063 MAP3K19Q56UN5 1328 aa27.1■■□□□ 1.93
GSDMD-212ENST00000533063 ZBED9Q6R2W3 1325 aa27.09■■□□□ 1.93
GSDMD-212ENST00000533063 LTN1O94822 1766 aa27.09■■□□□ 1.93
GSDMD-212ENST00000533063 MED1Q15648 1581 aaPredicted RBP27.07■■□□□ 1.92
GSDMD-212ENST00000533063 TNS3Q68CZ2 1445 aa27.07■■□□□ 1.92
GSDMD-212ENST00000533063 USP19O94966 1318 aa27.07■■□□□ 1.92
GSDMD-212ENST00000533063 DIAPH1O60610 1272 aaKnown RBP27.07■■□□□ 1.92
GSDMD-212ENST00000533063 SOS2Q07890 1332 aaPredicted RBP27.07■■□□□ 1.92
GSDMD-212ENST00000533063 ROBO1Q9Y6N7 1651 aa27.06■■□□□ 1.92
GSDMD-212ENST00000533063 CRYBG1Q9Y4K1 1723 aa27.06■■□□□ 1.92
GSDMD-212ENST00000533063 SPATA31A3Q5VYP0 1347 aa27.05■■□□□ 1.92
GSDMD-212ENST00000533063 IL13P35225 146 aa27.04■■□□□ 1.92
GSDMD-212ENST00000533063 LMOD2Q6P5Q4 547 aa27.04■■□□□ 1.92
GSDMD-212ENST00000533063 CCDC146Q8IYE0 955 aa27.04■■□□□ 1.92
GSDMD-212ENST00000533063 PHRF1Q9P1Y6 1649 aaKnown RBP27.03■■□□□ 1.92
GSDMD-212ENST00000533063 U2AF1L5P0DN76 240 aaPredicted RBP27.02■■□□□ 1.92
GSDMD-212ENST00000533063 U2AF1Q01081 240 aaKnown RBP eCLIP27.02■■□□□ 1.92
GSDMD-212ENST00000533063 HSP90AB2PQ58FF8 381 aa27.02■■□□□ 1.92
GSDMD-212ENST00000533063 FLT4P35916 1363 aa27.01■■□□□ 1.92
GSDMD-212ENST00000533063 NUDCQ9Y266 331 aa27.01■■□□□ 1.91
GSDMD-212ENST00000533063 U2SURPO15042 1029 aaKnown RBP27■■□□□ 1.91
GSDMD-212ENST00000533063 GCP02774 474 aa27■■□□□ 1.91
GSDMD-212ENST00000533063 RGPD1P0DJD0 1748 aa27■■□□□ 1.91
GSDMD-212ENST00000533063 KCNH5Q8NCM2 988 aa27■■□□□ 1.91
GSDMD-212ENST00000533063 KIF24Q5T7B8 1368 aa26.99■■□□□ 1.91
GSDMD-212ENST00000533063 EIF4A2Q14240 407 aaKnown RBP26.98■■□□□ 1.91
GSDMD-212ENST00000533063 IQSEC2Q5JU85 1478 aa26.97■■□□□ 1.91
GSDMD-212ENST00000533063 ARHGEF10O15013 1369 aa26.97■■□□□ 1.91
GSDMD-212ENST00000533063 HOXC9P31274 260 aa26.96■■□□□ 1.91
GSDMD-212ENST00000533063 AHDC1Q5TGY3 1603 aaPredicted RBP26.96■■□□□ 1.91
GSDMD-212ENST00000533063 PLEKHG5O94827 1062 aa26.95■■□□□ 1.91
GSDMD-212ENST00000533063 AMPHP49418 695 aa26.95■■□□□ 1.91
GSDMD-212ENST00000533063 PLEKHF1Q96S99 279 aa26.95■■□□□ 1.91
GSDMD-212ENST00000533063 RTL1A6NKG5 1358 aa26.95■■□□□ 1.9
GSDMD-212ENST00000533063 APAF1O14727 1248 aa26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms