RNA–Protein interactions for RNA: ENST00000533039.2

SOX9-AS1-210, SOX9 antisense RNA 1, humanhuman

TSL 3

Gene SOX9-AS1, Length 426 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-210ENST00000533039 PAK3O75914 559 aaPredicted RBP12.6□□□□□ -0.39
SOX9-AS1-210ENST00000533039 NBPF1Q3BBV0 1214 aa12.6□□□□□ -0.39
SOX9-AS1-210ENST00000533039 CDK19Q9BWU1 502 aa12.6□□□□□ -0.39
SOX9-AS1-210ENST00000533039 L3MBTL2Q969R5 705 aa12.59□□□□□ -0.39
SOX9-AS1-210ENST00000533039 GLI3P10071 1580 aa12.59□□□□□ -0.39
SOX9-AS1-210ENST00000533039 NRAPQ86VF7 1730 aa12.59□□□□□ -0.39
SOX9-AS1-210ENST00000533039 NEUROD1Q13562 356 aa12.58□□□□□ -0.4
SOX9-AS1-210ENST00000533039 CCDC9Q9Y3X0 531 aaKnown RBP12.58□□□□□ -0.4
SOX9-AS1-210ENST00000533039 PHRF1Q9P1Y6 1649 aaKnown RBP12.58□□□□□ -0.4
SOX9-AS1-210ENST00000533039 RALGAPBQ86X10 1494 aa12.58□□□□□ -0.4
SOX9-AS1-210ENST00000533039 CENPJQ9HC77 1338 aaPredicted RBP12.58□□□□□ -0.4
SOX9-AS1-210ENST00000533039 SIN3AQ96ST3 1273 aa12.57□□□□□ -0.4
SOX9-AS1-210ENST00000533039 CCDC61Q9Y6R9 512 aa12.57□□□□□ -0.4
SOX9-AS1-210ENST00000533039 SRPK2P78362 688 aaKnown RBP12.56□□□□□ -0.4
SOX9-AS1-210ENST00000533039 ACEP12821 1306 aa12.56□□□□□ -0.4
SOX9-AS1-210ENST00000533039 POLR3AO14802 1390 aaPredicted RBP12.56□□□□□ -0.4
SOX9-AS1-210ENST00000533039 FAM83GA6ND36 823 aa12.55□□□□□ -0.4
SOX9-AS1-210ENST00000533039 VPS72Q15906 364 aa12.55□□□□□ -0.4
SOX9-AS1-210ENST00000533039 PLEKHG3A1L390 1219 aa12.54□□□□□ -0.4
SOX9-AS1-210ENST00000533039 ROCK2O75116 1388 aaKnown RBP12.54□□□□□ -0.4
SOX9-AS1-210ENST00000533039 PPIP5K1Q6PFW1 1433 aa12.54□□□□□ -0.4
SOX9-AS1-210ENST00000533039 NBPF8Q3BBV2 869 aa12.53□□□□□ -0.4
SOX9-AS1-210ENST00000533039 CCDC125Q86Z20 511 aa12.53□□□□□ -0.4
SOX9-AS1-210ENST00000533039 BTG4Q9NY30 223 aa12.53□□□□□ -0.4
SOX9-AS1-210ENST00000533039 PRDM11Q9NQV5 511 aa12.52□□□□□ -0.41
SOX9-AS1-210ENST00000533039 A0A0G2JS52 829 aa12.51□□□□□ -0.41
SOX9-AS1-210ENST00000533039 MYT1Q01538 1121 aa12.51□□□□□ -0.41
SOX9-AS1-210ENST00000533039 SEPT12Q8IYM1 358 aa12.51□□□□□ -0.41
SOX9-AS1-210ENST00000533039 ABTB2Q8N961 1025 aa12.51□□□□□ -0.41
SOX9-AS1-210ENST00000533039 CABP2Q9NPB3 220 aa12.51□□□□□ -0.41
SOX9-AS1-210ENST00000533039 EVC2Q86UK5 1308 aa12.51□□□□□ -0.41
SOX9-AS1-210ENST00000533039 AKAP12Q02952 1782 aa12.51□□□□□ -0.41
SOX9-AS1-210ENST00000533039 EP400Q96L91 3159 aa12.51□□□□□ -0.41
SOX9-AS1-210ENST00000533039 NUTM2GQ5VZR2 741 aa12.5□□□□□ -0.41
SOX9-AS1-210ENST00000533039 BRD4O60885 1362 aaPredicted RBP12.5□□□□□ -0.41
SOX9-AS1-210ENST00000533039 NRKQ7Z2Y5 1582 aa12.49□□□□□ -0.41
SOX9-AS1-210ENST00000533039 KIAA0232Q92628 1395 aa12.49□□□□□ -0.41
SOX9-AS1-210ENST00000533039 ONECUT3O60422 494 aaPredicted RBP12.49□□□□□ -0.41
SOX9-AS1-210ENST00000533039 POTEHQ6S545 545 aa12.49□□□□□ -0.41
SOX9-AS1-210ENST00000533039 TONSLQ96HA7 1378 aa12.48□□□□□ -0.41
SOX9-AS1-210ENST00000533039 ZC3H6P61129 1189 aaKnown RBP12.48□□□□□ -0.41
SOX9-AS1-210ENST00000533039 TRIM26Q12899 539 aaPredicted RBP12.48□□□□□ -0.41
SOX9-AS1-210ENST00000533039 SF3B2Q13435 895 aaKnown RBP12.48□□□□□ -0.41
SOX9-AS1-210ENST00000533039 NLRP13Q86W25 1043 aa12.48□□□□□ -0.41
SOX9-AS1-210ENST00000533039 BLMP54132 1417 aaPredicted RBP12.47□□□□□ -0.41
SOX9-AS1-210ENST00000533039 CHRNA2Q15822 529 aa12.47□□□□□ -0.41
SOX9-AS1-210ENST00000533039 FAM98CQ17RN3 349 aaKnown RBP12.47□□□□□ -0.41
SOX9-AS1-210ENST00000533039 KRT27Q7Z3Y8 459 aa12.47□□□□□ -0.41
SOX9-AS1-210ENST00000533039 CABP1Q9NZU7 370 aa12.47□□□□□ -0.41
SOX9-AS1-210ENST00000533039 USP6P35125 1406 aa12.46□□□□□ -0.41
SOX9-AS1-210ENST00000533039 RGPD1P0DJD0 1748 aa12.46□□□□□ -0.41
SOX9-AS1-210ENST00000533039 SPATA31A5Q5VU36 1347 aa12.46□□□□□ -0.41
SOX9-AS1-210ENST00000533039 SPATA31A7Q8IWB4 1347 aa12.46□□□□□ -0.41
SOX9-AS1-210ENST00000533039 THSD7AQ9UPZ6 1657 aa12.46□□□□□ -0.41
SOX9-AS1-210ENST00000533039 PIK3C2AO00443 1686 aa12.45□□□□□ -0.42
SOX9-AS1-210ENST00000533039 LMO7Q8WWI1 1683 aa12.45□□□□□ -0.42
SOX9-AS1-210ENST00000533039 EVA1CP58658 441 aa12.45□□□□□ -0.42
SOX9-AS1-210ENST00000533039 CARD11Q9BXL7 1154 aa12.45□□□□□ -0.42
SOX9-AS1-210ENST00000533039 STRN4Q9NRL3 753 aa12.45□□□□□ -0.42
SOX9-AS1-210ENST00000533039 USP19O94966 1318 aa12.44□□□□□ -0.42
SOX9-AS1-210ENST00000533039 ZNF692Q9BU19 519 aaPredicted RBP12.44□□□□□ -0.42
SOX9-AS1-210ENST00000533039 RNF39Q9H2S5 420 aa12.44□□□□□ -0.42
SOX9-AS1-210ENST00000533039 ZRANB1Q9UGI0 708 aa12.44□□□□□ -0.42
SOX9-AS1-210ENST00000533039 MON2Q7Z3U7 1717 aa12.44□□□□□ -0.42
SOX9-AS1-210ENST00000533039 CPDO75976 1380 aa12.43□□□□□ -0.42
SOX9-AS1-210ENST00000533039 SPATA31A1Q5TZJ5 1347 aa12.43□□□□□ -0.42
SOX9-AS1-210ENST00000533039 CAMTA1Q9Y6Y1 1673 aa12.43□□□□□ -0.42
SOX9-AS1-210ENST00000533039 GCP02774 474 aa12.43□□□□□ -0.42
SOX9-AS1-210ENST00000533039 NLRP6P59044 892 aa12.43□□□□□ -0.42
SOX9-AS1-210ENST00000533039 SBNO2Q9Y2G9 1366 aa12.43□□□□□ -0.42
SOX9-AS1-210ENST00000533039 RGPD5Q99666 1765 aa12.42□□□□□ -0.42
SOX9-AS1-210ENST00000533039 SSH2Q76I76 1423 aa12.42□□□□□ -0.42
SOX9-AS1-210ENST00000533039 SLIT3O75094 1523 aa12.42□□□□□ -0.42
SOX9-AS1-210ENST00000533039 USP35Q9P2H5 1018 aa12.41□□□□□ -0.42
SOX9-AS1-210ENST00000533039 ZBTB7CA1YPR0 619 aa12.4□□□□□ -0.42
SOX9-AS1-210ENST00000533039 BAG6P46379 1132 aa12.4□□□□□ -0.42
SOX9-AS1-210ENST00000533039 KTN1Q86UP2 1357 aaKnown RBP12.4□□□□□ -0.42
SOX9-AS1-210ENST00000533039 TNS1Q9HBL0 1735 aaKnown RBP12.4□□□□□ -0.43
SOX9-AS1-210ENST00000533039 PARP4Q9UKK3 1724 aaKnown RBP12.4□□□□□ -0.43
SOX9-AS1-210ENST00000533039 TTC21AQ8NDW8 1320 aa12.39□□□□□ -0.43
SOX9-AS1-210ENST00000533039 COL18A1P39060 1754 aa12.39□□□□□ -0.43
SOX9-AS1-210ENST00000533039 DEFB132Q7Z7B7 95 aa12.39□□□□□ -0.43
SOX9-AS1-210ENST00000533039 COL5A2P05997 1499 aaPredicted RBP12.39□□□□□ -0.43
SOX9-AS1-210ENST00000533039 WNK3Q9BYP7 1800 aa12.39□□□□□ -0.43
SOX9-AS1-210ENST00000533039 TTC21BQ7Z4L5 1316 aa12.38□□□□□ -0.43
SOX9-AS1-210ENST00000533039 CPSF1Q10570 1443 aaKnown RBP12.38□□□□□ -0.43
SOX9-AS1-210ENST00000533039 LARP1Q6PKG0 1096 aaKnown RBP12.38□□□□□ -0.43
SOX9-AS1-210ENST00000533039 BARGINQ6ZT62 677 aa12.38□□□□□ -0.43
SOX9-AS1-210ENST00000533039 TCP11L2Q8N4U5 519 aa12.38□□□□□ -0.43
SOX9-AS1-210ENST00000533039 KCNH5Q8NCM2 988 aa12.38□□□□□ -0.43
SOX9-AS1-210ENST00000533039 THRAP3Q9Y2W1 955 aaKnown RBP12.38□□□□□ -0.43
SOX9-AS1-210ENST00000533039 AATKQ6ZMQ8 1374 aa12.38□□□□□ -0.43
SOX9-AS1-210ENST00000533039 USP54Q70EL1 1684 aa12.38□□□□□ -0.43
SOX9-AS1-210ENST00000533039 LTN1O94822 1766 aa12.38□□□□□ -0.43
SOX9-AS1-210ENST00000533039 PDE3BQ13370 1112 aa12.37□□□□□ -0.43
SOX9-AS1-210ENST00000533039 FAM182BQ5T319 152 aa12.37□□□□□ -0.43
SOX9-AS1-210ENST00000533039 CRB1P82279 1406 aa12.37□□□□□ -0.43
SOX9-AS1-210ENST00000533039 FAM196AQ6ZSG2 479 aa12.36□□□□□ -0.43
SOX9-AS1-210ENST00000533039 HDGFL2Q7Z4V5 671 aaPredicted RBP12.36□□□□□ -0.43
SOX9-AS1-210ENST00000533039 TMC1Q8TDI8 760 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms