RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 RGS3P49796 1198 aa23.18■■□□□ 1.3
UBXN1-213ENST00000532904 WAPLQ7Z5K2 1190 aa23.18■■□□□ 1.3
UBXN1-213ENST00000532904 PDE3AQ14432 1141 aa23.17■■□□□ 1.3
UBXN1-213ENST00000532904 HDGFL2Q7Z4V5 671 aaPredicted RBP23.17■■□□□ 1.3
UBXN1-213ENST00000532904 CEBPAP49715 358 aaPredicted RBP23.16■■□□□ 1.3
UBXN1-213ENST00000532904 DMRT2Q9Y5R5 561 aa23.16■■□□□ 1.3
UBXN1-213ENST00000532904 KIF20BQ96Q89 1820 aa23.16■■□□□ 1.3
UBXN1-213ENST00000532904 GSE1Q14687 1217 aa23.15■■□□□ 1.3
UBXN1-213ENST00000532904 IL27Q8NEV9 243 aa23.15■■□□□ 1.3
UBXN1-213ENST00000532904 CFAP53Q96M91 514 aa23.13■■□□□ 1.29
UBXN1-213ENST00000532904 VIRMAQ69YN4 1812 aaKnown RBP23.13■■□□□ 1.29
UBXN1-213ENST00000532904 WASLO00401 505 aaPredicted RBP23.13■■□□□ 1.29
UBXN1-213ENST00000532904 IGHDP01880 384 aa23.13■■□□□ 1.29
UBXN1-213ENST00000532904 EID1Q9Y6B2 187 aa23.13■■□□□ 1.29
UBXN1-213ENST00000532904 LTKP29376 864 aa23.12■■□□□ 1.29
UBXN1-213ENST00000532904 ADGRB2O60241 1585 aa23.12■■□□□ 1.29
UBXN1-213ENST00000532904 WWC1Q8IX03 1113 aa23.12■■□□□ 1.29
UBXN1-213ENST00000532904 CABP1Q9NZU7 370 aa23.12■■□□□ 1.29
UBXN1-213ENST00000532904 MTHFSP49914 203 aa23.11■■□□□ 1.29
UBXN1-213ENST00000532904 TXNDC2Q86VQ3 553 aa23.11■■□□□ 1.29
UBXN1-213ENST00000532904 DIP2AQ14689 1571 aa23.11■■□□□ 1.29
UBXN1-213ENST00000532904 FYB1O15117 783 aa23.1■■□□□ 1.29
UBXN1-213ENST00000532904 TNNT2P45379 298 aaPredicted RBP23.09■■□□□ 1.29
UBXN1-213ENST00000532904 THEMISQ8N1K5 641 aaPredicted RBP23.09■■□□□ 1.29
UBXN1-213ENST00000532904 CLUAP1Q96AJ1 413 aa23.09■■□□□ 1.29
UBXN1-213ENST00000532904 CPSF1Q10570 1443 aaKnown RBP23.09■■□□□ 1.29
UBXN1-213ENST00000532904 MAPK8IP3Q9UPT6 1336 aa23.08■■□□□ 1.28
UBXN1-213ENST00000532904 CDC42BPGQ6DT37 1551 aa23.06■■□□□ 1.28
UBXN1-213ENST00000532904 USP19O94966 1318 aa23.06■■□□□ 1.28
UBXN1-213ENST00000532904 ROBO2Q9HCK4 1378 aa23.06■■□□□ 1.28
UBXN1-213ENST00000532904 TBX22Q9Y458 520 aa23.05■■□□□ 1.28
UBXN1-213ENST00000532904 IQSEC2Q5JU85 1478 aa23.05■■□□□ 1.28
UBXN1-213ENST00000532904 NCBP3Q53F19 620 aaKnown RBP23.05■■□□□ 1.28
UBXN1-213ENST00000532904 EDC4Q6P2E9 1401 aaKnown RBP23.05■■□□□ 1.28
UBXN1-213ENST00000532904 PPIP5K1Q6PFW1 1433 aa23.05■■□□□ 1.28
UBXN1-213ENST00000532904 MON2Q7Z3U7 1717 aa23.04■■□□□ 1.28
UBXN1-213ENST00000532904 AAMPQ13685 434 aa23.04■■□□□ 1.28
UBXN1-213ENST00000532904 PANK1Q8TE04 598 aa23.04■■□□□ 1.28
UBXN1-213ENST00000532904 GGNBP2Q9H3C7 697 aa23.04■■□□□ 1.28
UBXN1-213ENST00000532904 AKAP12Q02952 1782 aa23.04■■□□□ 1.28
UBXN1-213ENST00000532904 CANXP27824 592 aaKnown RBP23.04■■□□□ 1.28
UBXN1-213ENST00000532904 RUNDC1Q96C34 613 aa23.04■■□□□ 1.28
UBXN1-213ENST00000532904 COG6Q9Y2V7 657 aa23.04■■□□□ 1.28
UBXN1-213ENST00000532904 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.04■■□□□ 1.28
UBXN1-213ENST00000532904 RIMS1Q86UR5 1692 aaKnown RBP23.03■■□□□ 1.28
UBXN1-213ENST00000532904 CEP170BQ9Y4F5 1589 aaPredicted RBP23.03■■□□□ 1.28
UBXN1-213ENST00000532904 FRAT1Q92837 279 aaPredicted RBP23.03■■□□□ 1.28
UBXN1-213ENST00000532904 PHF23Q9BUL5 403 aaPredicted RBP23.03■■□□□ 1.28
UBXN1-213ENST00000532904 COL3A1P02461 1466 aaPredicted RBP23.03■■□□□ 1.28
UBXN1-213ENST00000532904 NUDT16Q96DE0 195 aaKnown RBP23.02■■□□□ 1.28
UBXN1-213ENST00000532904 CCDC61Q9Y6R9 512 aa23.02■■□□□ 1.28
UBXN1-213ENST00000532904 ITSN1Q15811 1721 aa23.02■■□□□ 1.28
UBXN1-213ENST00000532904 PTPRUQ92729 1446 aa23.01■■□□□ 1.27
UBXN1-213ENST00000532904 PTCH1Q13635 1447 aa23.01■■□□□ 1.27
UBXN1-213ENST00000532904 ADAMTSL3P82987 1691 aa23.01■■□□□ 1.27
UBXN1-213ENST00000532904 RARSP54136 660 aaKnown RBP23.01■■□□□ 1.27
UBXN1-213ENST00000532904 WDR63Q8IWG1 891 aa23■■□□□ 1.27
UBXN1-213ENST00000532904 TOPAZ1Q8N9V7 1692 aa23■■□□□ 1.27
UBXN1-213ENST00000532904 FRAT2O75474 233 aaPredicted RBP22.99■■□□□ 1.27
UBXN1-213ENST00000532904 PNPLA6Q8IY17 1366 aa22.99■■□□□ 1.27
UBXN1-213ENST00000532904 ZNF142P52746 1687 aaPredicted RBP22.99■■□□□ 1.27
UBXN1-213ENST00000532904 PMFBP1Q8TBY8 1022 aa22.99■■□□□ 1.27
UBXN1-213ENST00000532904 TCP11L2Q8N4U5 519 aa22.98■■□□□ 1.27
UBXN1-213ENST00000532904 CCDC27Q2M243 656 aa22.97■■□□□ 1.27
UBXN1-213ENST00000532904 ZNF692Q9BU19 519 aaPredicted RBP22.97■■□□□ 1.27
UBXN1-213ENST00000532904 XRN1Q8IZH2 1706 aaKnown RBP22.97■■□□□ 1.27
UBXN1-213ENST00000532904 RTN4Q9NQC3 1192 aaKnown RBP22.96■■□□□ 1.27
UBXN1-213ENST00000532904 SEC24BO95487 1268 aa22.96■■□□□ 1.27
UBXN1-213ENST00000532904 SLC26A8Q96RN1 970 aa22.96■■□□□ 1.27
UBXN1-213ENST00000532904 SETD1BQ9UPS6 1966 aaKnown RBP22.96■■□□□ 1.27
UBXN1-213ENST00000532904 PIK3R4Q99570 1358 aa22.95■■□□□ 1.26
UBXN1-213ENST00000532904 BRPF3Q9ULD4 1205 aa22.95■■□□□ 1.26
UBXN1-213ENST00000532904 RRP7AQ9Y3A4 280 aaKnown RBP22.95■■□□□ 1.26
UBXN1-213ENST00000532904 NEUROD2Q15784 382 aa22.94■■□□□ 1.26
UBXN1-213ENST00000532904 AMOTL2Q9Y2J4 779 aa22.94■■□□□ 1.26
UBXN1-213ENST00000532904 PRR36Q9H6K5 1346 aa22.94■■□□□ 1.26
UBXN1-213ENST00000532904 MAP2P11137 1827 aaKnown RBP22.93■■□□□ 1.26
UBXN1-213ENST00000532904 BECN1Q14457 450 aa22.93■■□□□ 1.26
UBXN1-213ENST00000532904 PLPPR3Q6T4P5 718 aa22.92■■□□□ 1.26
UBXN1-213ENST00000532904 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.92■■□□□ 1.26
UBXN1-213ENST00000532904 PCDHB15Q9Y5E8 787 aa22.92■■□□□ 1.26
UBXN1-213ENST00000532904 AATKQ6ZMQ8 1374 aa22.92■■□□□ 1.26
UBXN1-213ENST00000532904 U2AF1L5P0DN76 240 aaPredicted RBP22.91■■□□□ 1.26
UBXN1-213ENST00000532904 RLBP1P12271 317 aa22.91■■□□□ 1.26
UBXN1-213ENST00000532904 U2AF1Q01081 240 aaKnown RBP eCLIP22.91■■□□□ 1.26
UBXN1-213ENST00000532904 PLEKHG3A1L390 1219 aa22.91■■□□□ 1.26
UBXN1-213ENST00000532904 NRKQ7Z2Y5 1582 aa22.91■■□□□ 1.26
UBXN1-213ENST00000532904 DIAPH1O60610 1272 aaKnown RBP22.88■■□□□ 1.25
UBXN1-213ENST00000532904 MYH16Q9H6N6 1097 aa22.88■■□□□ 1.25
UBXN1-213ENST00000532904 TNNQ9UQP3 1299 aa22.88■■□□□ 1.25
UBXN1-213ENST00000532904 PNNQ9H307 717 aaKnown RBP22.87■■□□□ 1.25
UBXN1-213ENST00000532904 POLKQ9UBT6 870 aa22.87■■□□□ 1.25
UBXN1-213ENST00000532904 PDZRN3Q9UPQ7 1066 aa22.87■■□□□ 1.25
UBXN1-213ENST00000532904 PLEKHF1Q96S99 279 aa22.86■■□□□ 1.25
UBXN1-213ENST00000532904 RWDD1Q9H446 243 aaPredicted RBP22.86■■□□□ 1.25
UBXN1-213ENST00000532904 NCKAP5LQ9HCH0 1330 aa22.86■■□□□ 1.25
UBXN1-213ENST00000532904 CDK12Q9NYV4 1490 aaPredicted RBP22.86■■□□□ 1.25
UBXN1-213ENST00000532904 NME9Q86XW9 330 aa22.85■■□□□ 1.25
UBXN1-213ENST00000532904 TBC1D32Q96NH3 1257 aa22.85■■□□□ 1.25
UBXN1-213ENST00000532904 UPF2Q9HAU5 1272 aaKnown RBP22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms