RNA–Protein interactions for RNA: ENST00000532656.6

CTSB-226, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-226ENST00000532656 NGDNQ8NEJ9 315 aaKnown RBP25.14■■□□□ 1.62
CTSB-226ENST00000532656 COL14A1Q05707 1796 aaKnown RBP25.13■■□□□ 1.61
CTSB-226ENST00000532656 ARHGEF28Q8N1W1 1705 aaKnown RBP25.13■■□□□ 1.61
CTSB-226ENST00000532656 PAK3O75914 559 aaPredicted RBP25.12■■□□□ 1.61
CTSB-226ENST00000532656 FAM98CQ17RN3 349 aaKnown RBP25.12■■□□□ 1.61
CTSB-226ENST00000532656 CRYBG1Q9Y4K1 1723 aa25.12■■□□□ 1.61
CTSB-226ENST00000532656 STAC3Q96MF2 364 aa25.1■■□□□ 1.61
CTSB-226ENST00000532656 ITSN1Q15811 1721 aa25.09■■□□□ 1.61
CTSB-226ENST00000532656 ATP7BP35670 1465 aa25.09■■□□□ 1.61
CTSB-226ENST00000532656 NUDT16Q96DE0 195 aaKnown RBP25.06■■□□□ 1.6
CTSB-226ENST00000532656 PRDM11Q9NQV5 511 aa25.05■■□□□ 1.6
CTSB-226ENST00000532656 SPATA31A5Q5VU36 1347 aa25.04■■□□□ 1.6
CTSB-226ENST00000532656 SPATA31A7Q8IWB4 1347 aa25.04■■□□□ 1.6
CTSB-226ENST00000532656 HRCP23327 699 aa25.03■■□□□ 1.6
CTSB-226ENST00000532656 FAM182BQ5T319 152 aa25.03■■□□□ 1.6
CTSB-226ENST00000532656 BAG6P46379 1132 aa25.02■■□□□ 1.6
CTSB-226ENST00000532656 PHRF1Q9P1Y6 1649 aaKnown RBP25.01■■□□□ 1.59
CTSB-226ENST00000532656 CDK19Q9BWU1 502 aa25.01■■□□□ 1.59
CTSB-226ENST00000532656 KIAA0232Q92628 1395 aa25.01■■□□□ 1.59
CTSB-226ENST00000532656 CHRNA2Q15822 529 aa25■■□□□ 1.59
CTSB-226ENST00000532656 NUTM2GQ5VZR2 741 aa25■■□□□ 1.59
CTSB-226ENST00000532656 THSD7AQ9UPZ6 1657 aa25■■□□□ 1.59
CTSB-226ENST00000532656 TOPAZ1Q8N9V7 1692 aa24.99■■□□□ 1.59
CTSB-226ENST00000532656 RGPD1P0DJD0 1748 aa24.98■■□□□ 1.59
CTSB-226ENST00000532656 ZC3H6P61129 1189 aaKnown RBP24.97■■□□□ 1.59
CTSB-226ENST00000532656 ACEP12821 1306 aa24.96■■□□□ 1.59
CTSB-226ENST00000532656 KIAA1210Q9ULL0 1709 aa24.96■■□□□ 1.59
CTSB-226ENST00000532656 PSDA5PKW4 1024 aaPredicted RBP24.96■■□□□ 1.59
CTSB-226ENST00000532656 STRN4Q9NRL3 753 aa24.96■■□□□ 1.59
CTSB-226ENST00000532656 POLR3AO14802 1390 aaPredicted RBP24.95■■□□□ 1.59
CTSB-226ENST00000532656 EN1Q05925 392 aaPredicted RBP24.95■■□□□ 1.58
CTSB-226ENST00000532656 SPATA31A1Q5TZJ5 1347 aa24.94■■□□□ 1.58
CTSB-226ENST00000532656 LRP5O75197 1615 aa24.94■■□□□ 1.58
CTSB-226ENST00000532656 NBPF1Q3BBV0 1214 aa24.93■■□□□ 1.58
CTSB-226ENST00000532656 NBPF8Q3BBV2 869 aa24.93■■□□□ 1.58
CTSB-226ENST00000532656 CCDC61Q9Y6R9 512 aa24.93■■□□□ 1.58
CTSB-226ENST00000532656 TNS1Q9HBL0 1735 aaKnown RBP24.92■■□□□ 1.58
CTSB-226ENST00000532656 NRKQ7Z2Y5 1582 aa24.9■■□□□ 1.58
CTSB-226ENST00000532656 PLEKHG3A1L390 1219 aa24.9■■□□□ 1.58
CTSB-226ENST00000532656 USP35Q9P2H5 1018 aa24.9■■□□□ 1.58
CTSB-226ENST00000532656 ABTB2Q8N961 1025 aa24.88■■□□□ 1.57
CTSB-226ENST00000532656 DISP2A7MBM2 1401 aa24.87■■□□□ 1.57
CTSB-226ENST00000532656 SSH2Q76I76 1423 aa24.87■■□□□ 1.57
CTSB-226ENST00000532656 EVA1CP58658 441 aa24.87■■□□□ 1.57
CTSB-226ENST00000532656 SRPK2P78362 688 aaKnown RBP24.86■■□□□ 1.57
CTSB-226ENST00000532656 PPIP5K1Q6PFW1 1433 aa24.86■■□□□ 1.57
CTSB-226ENST00000532656 CAMTA1Q9Y6Y1 1673 aa24.85■■□□□ 1.57
CTSB-226ENST00000532656 TRIM37O94972 964 aa24.85■■□□□ 1.57
CTSB-226ENST00000532656 CENPJQ9HC77 1338 aaPredicted RBP24.85■■□□□ 1.57
CTSB-226ENST00000532656 R3HDM1Q15032 1099 aaKnown RBP24.84■■□□□ 1.57
CTSB-226ENST00000532656 EZH2Q15910 746 aaKnown RBP24.84■■□□□ 1.57
CTSB-226ENST00000532656 LMO7Q8WWI1 1683 aa24.84■■□□□ 1.57
CTSB-226ENST00000532656 USP19O94966 1318 aa24.84■■□□□ 1.57
CTSB-226ENST00000532656 LARP1Q6PKG0 1096 aaKnown RBP24.83■■□□□ 1.57
CTSB-226ENST00000532656 FAM196AQ6ZSG2 479 aa24.83■■□□□ 1.57
CTSB-226ENST00000532656 CABP2Q9NPB3 220 aa24.83■■□□□ 1.57
CTSB-226ENST00000532656 QRICH2Q9H0J4 1663 aa24.82■■□□□ 1.56
CTSB-226ENST00000532656 CPDO75976 1380 aa24.81■■□□□ 1.56
CTSB-226ENST00000532656 BARGINQ6ZT62 677 aa24.81■■□□□ 1.56
CTSB-226ENST00000532656 NLRP13Q86W25 1043 aa24.8■■□□□ 1.56
CTSB-226ENST00000532656 GCP02774 474 aa24.79■■□□□ 1.56
CTSB-226ENST00000532656 PDE3BQ13370 1112 aa24.79■■□□□ 1.56
CTSB-226ENST00000532656 CAMKK2Q96RR4 588 aa24.79■■□□□ 1.56
CTSB-226ENST00000532656 APBA3O96018 575 aa24.78■■□□□ 1.56
CTSB-226ENST00000532656 TCP11L2Q8N4U5 519 aa24.78■■□□□ 1.56
CTSB-226ENST00000532656 ZBTB7CA1YPR0 619 aa24.76■■□□□ 1.55
CTSB-226ENST00000532656 COL5A2P05997 1499 aaPredicted RBP24.76■■□□□ 1.55
CTSB-226ENST00000532656 CABP1Q9NZU7 370 aa24.75■■□□□ 1.55
CTSB-226ENST00000532656 USP6P35125 1406 aa24.74■■□□□ 1.55
CTSB-226ENST00000532656 BRD4O60885 1362 aaPredicted RBP24.73■■□□□ 1.55
CTSB-226ENST00000532656 PARD3Q8TEW0 1356 aa24.72■■□□□ 1.55
CTSB-226ENST00000532656 NLRP6P59044 892 aa24.72■■□□□ 1.55
CTSB-226ENST00000532656 L3MBTL2Q969R5 705 aa24.72■■□□□ 1.55
CTSB-226ENST00000532656 THRAP3Q9Y2W1 955 aaKnown RBP24.72■■□□□ 1.55
CTSB-226ENST00000532656 RREB1Q92766 1687 aa24.72■■□□□ 1.55
CTSB-226ENST00000532656 PARP4Q9UKK3 1724 aaKnown RBP24.71■■□□□ 1.55
CTSB-226ENST00000532656 SLIT3O75094 1523 aa24.71■■□□□ 1.55
CTSB-226ENST00000532656 CRB1P82279 1406 aa24.69■■□□□ 1.54
CTSB-226ENST00000532656 NUP188Q5SRE5 1749 aa24.69■■□□□ 1.54
CTSB-226ENST00000532656 PIK3C2AO00443 1686 aa24.69■■□□□ 1.54
CTSB-226ENST00000532656 TRPM1Q7Z4N2 1603 aa24.68■■□□□ 1.54
CTSB-226ENST00000532656 EVC2Q86UK5 1308 aa24.67■■□□□ 1.54
CTSB-226ENST00000532656 AATKQ6ZMQ8 1374 aa24.67■■□□□ 1.54
CTSB-226ENST00000532656 SIN3AQ96ST3 1273 aa24.65■■□□□ 1.54
CTSB-226ENST00000532656 LRRC37A3O60309 1634 aa24.64■■□□□ 1.53
CTSB-226ENST00000532656 COL18A1P39060 1754 aa24.63■■□□□ 1.53
CTSB-226ENST00000532656 TOM1L2Q6ZVM7 507 aa24.63■■□□□ 1.53
CTSB-226ENST00000532656 OVOS2A0A0G2JMS6 1433 aa24.62■■□□□ 1.53
CTSB-226ENST00000532656 OVOS2A0A0J9YW53 1432 aa24.62■■□□□ 1.53
CTSB-226ENST00000532656 OVOS2Q6IE36 1432 aa24.62■■□□□ 1.53
CTSB-226ENST00000532656 PEAK1Q9H792 1746 aa24.62■■□□□ 1.53
CTSB-226ENST00000532656 ROCK2O75116 1388 aaKnown RBP24.62■■□□□ 1.53
CTSB-226ENST00000532656 NEUROD1Q13562 356 aa24.61■■□□□ 1.53
CTSB-226ENST00000532656 NBPF14Q5TI25 921 aa24.61■■□□□ 1.53
CTSB-226ENST00000532656 AXIN2Q9Y2T1 843 aa24.61■■□□□ 1.53
CTSB-226ENST00000532656 CPSF1Q10570 1443 aaKnown RBP24.61■■□□□ 1.53
CTSB-226ENST00000532656 AKAP12Q02952 1782 aa24.6■■□□□ 1.53
CTSB-226ENST00000532656 TTC21BQ7Z4L5 1316 aa24.6■■□□□ 1.53
CTSB-226ENST00000532656 WNK3Q9BYP7 1800 aa24.59■■□□□ 1.53
CTSB-226ENST00000532656 SOX12O15370 315 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms