RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 EXOSC9Q06265 439 aaKnown RBP17.97■□□□□ 0.47
PCDHA9-202ENST00000532602 BECN2A8MW95 431 aa17.97■□□□□ 0.47
PCDHA9-202ENST00000532602 GOLGA6L19H0YKK7 550 aa17.97■□□□□ 0.47
PCDHA9-202ENST00000532602 ZNF608Q9ULD9 1512 aaPredicted RBP17.97■□□□□ 0.47
PCDHA9-202ENST00000532602 GRIN2AQ12879 1464 aa17.97■□□□□ 0.47
PCDHA9-202ENST00000532602 CWC22Q9HCG8 908 aaKnown RBP17.97■□□□□ 0.47
PCDHA9-202ENST00000532602 CABP4P57796 275 aa17.96■□□□□ 0.47
PCDHA9-202ENST00000532602 AAMPQ13685 434 aa17.96■□□□□ 0.47
PCDHA9-202ENST00000532602 KIF6Q6ZMV9 814 aa17.96■□□□□ 0.47
PCDHA9-202ENST00000532602 MTMR7Q9Y216 660 aa17.96■□□□□ 0.47
PCDHA9-202ENST00000532602 URB2Q14146 1524 aaKnown RBP17.96■□□□□ 0.47
PCDHA9-202ENST00000532602 NFXL1Q6ZNB6 911 aa17.96■□□□□ 0.46
PCDHA9-202ENST00000532602 ZC3H6P61129 1189 aaKnown RBP17.95■□□□□ 0.46
PCDHA9-202ENST00000532602 MYL6BP14649 208 aa17.95■□□□□ 0.46
PCDHA9-202ENST00000532602 WASHC4Q2M389 1173 aa17.95■□□□□ 0.46
PCDHA9-202ENST00000532602 CCDC30Q5VVM6 783 aa17.95■□□□□ 0.46
PCDHA9-202ENST00000532602 ARID3AQ99856 593 aa17.95■□□□□ 0.46
PCDHA9-202ENST00000532602 PTPN23Q9H3S7 1636 aa17.94■□□□□ 0.46
PCDHA9-202ENST00000532602 SKOR2Q2VWA4 1001 aaPredicted RBP17.94■□□□□ 0.46
PCDHA9-202ENST00000532602 FBXO31Q5XUX0 539 aaPredicted RBP17.94■□□□□ 0.46
PCDHA9-202ENST00000532602 ANKRD20A12PQ8NF67 263 aa17.94■□□□□ 0.46
PCDHA9-202ENST00000532602 BRD4O60885 1362 aaPredicted RBP17.94■□□□□ 0.46
PCDHA9-202ENST00000532602 HOOK1Q9UJC3 728 aaKnown RBP17.94■□□□□ 0.46
PCDHA9-202ENST00000532602 ADGRL1O94910 1474 aa17.93■□□□□ 0.46
PCDHA9-202ENST00000532602 CCDC43Q96MW1 224 aaKnown RBP17.93■□□□□ 0.46
PCDHA9-202ENST00000532602 TWISTNBQ3B726 338 aaPredicted RBP17.93■□□□□ 0.46
PCDHA9-202ENST00000532602 CCDC141Q6ZP82 1450 aa17.92■□□□□ 0.46
PCDHA9-202ENST00000532602 NOB1Q9ULX3 412 aaKnown RBP17.92■□□□□ 0.46
PCDHA9-202ENST00000532602 DDX49Q9Y6V7 483 aaKnown RBP17.92■□□□□ 0.46
PCDHA9-202ENST00000532602 ZNF530Q6P9A1 599 aaPredicted RBP17.92■□□□□ 0.46
PCDHA9-202ENST00000532602 RALYLQ86SE5 291 aaKnown RBP17.92■□□□□ 0.46
PCDHA9-202ENST00000532602 DNAJC2Q99543 621 aaKnown RBP17.92■□□□□ 0.46
PCDHA9-202ENST00000532602 ZNF692Q9BU19 519 aaPredicted RBP17.92■□□□□ 0.46
PCDHA9-202ENST00000532602 SAFBQ15424 915 aaKnown RBP eCLIP17.91■□□□□ 0.46
PCDHA9-202ENST00000532602 IPO7O95373 1038 aaKnown RBP17.91■□□□□ 0.46
PCDHA9-202ENST00000532602 INTS3Q68E01 1043 aaKnown RBP17.9■□□□□ 0.46
PCDHA9-202ENST00000532602 NUDT16Q96DE0 195 aaKnown RBP17.9■□□□□ 0.46
PCDHA9-202ENST00000532602 SLC4A2P04920 1241 aa17.9■□□□□ 0.46
PCDHA9-202ENST00000532602 PRDM11Q9NQV5 511 aa17.9■□□□□ 0.46
PCDHA9-202ENST00000532602 BCAR3O75815 825 aa17.89■□□□□ 0.45
PCDHA9-202ENST00000532602 WDR97A6NE52 1622 aa17.88■□□□□ 0.45
PCDHA9-202ENST00000532602 SURF6O75683 361 aaKnown RBP17.88■□□□□ 0.45
PCDHA9-202ENST00000532602 GNAI3P08754 354 aa17.88■□□□□ 0.45
PCDHA9-202ENST00000532602 SIL1Q9H173 461 aa17.88■□□□□ 0.45
PCDHA9-202ENST00000532602 SF3B2Q13435 895 aaKnown RBP17.87■□□□□ 0.45
PCDHA9-202ENST00000532602 MIS18AQ9NYP9 233 aa17.87■□□□□ 0.45
PCDHA9-202ENST00000532602 SPG7Q9UQ90 795 aa17.87■□□□□ 0.45
PCDHA9-202ENST00000532602 HDGFL1Q5TGJ6 251 aa17.87■□□□□ 0.45
PCDHA9-202ENST00000532602 STK11IPQ8N1F8 1099 aa17.87■□□□□ 0.45
PCDHA9-202ENST00000532602 USHBP1Q8N6Y0 703 aa17.86■□□□□ 0.45
PCDHA9-202ENST00000532602 TBC1D2BQ9UPU7 963 aa17.86■□□□□ 0.45
PCDHA9-202ENST00000532602 NSD3Q9BZ95 1437 aa17.85■□□□□ 0.45
PCDHA9-202ENST00000532602 CCDC70Q6NSX1 233 aa17.85■□□□□ 0.45
PCDHA9-202ENST00000532602 MAP4K4O95819 1239 aaPredicted RBP17.85■□□□□ 0.45
PCDHA9-202ENST00000532602 RPGRIP1LQ68CZ1 1315 aa17.85■□□□□ 0.45
PCDHA9-202ENST00000532602 FSD1Q9BTV5 496 aa17.85■□□□□ 0.45
PCDHA9-202ENST00000532602 CLASRPQ8N2M8 674 aaKnown RBP17.85■□□□□ 0.45
PCDHA9-202ENST00000532602 CNNM1Q9NRU3 951 aa17.85■□□□□ 0.45
PCDHA9-202ENST00000532602 PCMTD1Q96MG8 357 aaPredicted RBP17.84■□□□□ 0.45
PCDHA9-202ENST00000532602 BTBD11A6QL63 1104 aa17.84■□□□□ 0.45
PCDHA9-202ENST00000532602 HMGB2P26583 209 aaKnown RBP17.84■□□□□ 0.45
PCDHA9-202ENST00000532602 ABCC5O15440 1437 aa17.84■□□□□ 0.45
PCDHA9-202ENST00000532602 VPS37CA5D8V6 355 aaPredicted RBP17.84■□□□□ 0.45
PCDHA9-202ENST00000532602 XBP1P17861 261 aa17.84■□□□□ 0.45
PCDHA9-202ENST00000532602 BRMS1Q9HCU9 246 aa17.84■□□□□ 0.45
PCDHA9-202ENST00000532602 SMC3Q9UQE7 1217 aa17.84■□□□□ 0.45
PCDHA9-202ENST00000532602 BICDL1Q6ZP65 573 aa17.83■□□□□ 0.45
PCDHA9-202ENST00000532602 BICD2Q8TD16 824 aa17.83■□□□□ 0.45
PCDHA9-202ENST00000532602 NINLQ9Y2I6 1382 aa17.83■□□□□ 0.45
PCDHA9-202ENST00000532602 NAIPQ13075 1403 aa17.83■□□□□ 0.45
PCDHA9-202ENST00000532602 CCDC184Q52MB2 194 aa17.83■□□□□ 0.44
PCDHA9-202ENST00000532602 ADAMTS2O95450 1211 aa17.82■□□□□ 0.44
PCDHA9-202ENST00000532602 SART3Q15020 963 aaKnown RBP17.82■□□□□ 0.44
PCDHA9-202ENST00000532602 PNISRQ8TF01 805 aaKnown RBP17.82■□□□□ 0.44
PCDHA9-202ENST00000532602 ANKRD30BQ9BXX2 1392 aa17.81■□□□□ 0.44
PCDHA9-202ENST00000532602 TTC39AQ5SRH9 613 aa17.81■□□□□ 0.44
PCDHA9-202ENST00000532602 CNKSR2Q8WXI2 1034 aa17.81■□□□□ 0.44
PCDHA9-202ENST00000532602 CNTROBQ8N137 903 aa17.81■□□□□ 0.44
PCDHA9-202ENST00000532602 R3HCC1Q9Y3T6 440 aaKnown RBP17.8■□□□□ 0.44
PCDHA9-202ENST00000532602 PSMA5P28066 241 aa17.8■□□□□ 0.44
PCDHA9-202ENST00000532602 CCDC85AQ96PX6 553 aaPredicted RBP17.8■□□□□ 0.44
PCDHA9-202ENST00000532602 FAM135AQ9P2D6 1515 aa17.8■□□□□ 0.44
PCDHA9-202ENST00000532602 ADGRF5Q8IZF2 1346 aa17.79■□□□□ 0.44
PCDHA9-202ENST00000532602 FANCAO15360 1455 aa17.79■□□□□ 0.44
PCDHA9-202ENST00000532602 SPINK5Q9NQ38 1064 aaPredicted RBP17.79■□□□□ 0.44
PCDHA9-202ENST00000532602 CCDC73Q6ZRK6 1079 aa17.79■□□□□ 0.44
PCDHA9-202ENST00000532602 AMOTL2Q9Y2J4 779 aa17.79■□□□□ 0.44
PCDHA9-202ENST00000532602 SLC3A2P08195 630 aaKnown RBP17.79■□□□□ 0.44
PCDHA9-202ENST00000532602 THUMPD2Q9BTF0 503 aaKnown RBP17.79■□□□□ 0.44
PCDHA9-202ENST00000532602 GNAI2P04899 355 aa17.79■□□□□ 0.44
PCDHA9-202ENST00000532602 NUCB2P80303 420 aa17.79■□□□□ 0.44
PCDHA9-202ENST00000532602 DCTN1Q14203 1278 aa17.79■□□□□ 0.44
PCDHA9-202ENST00000532602 ERC1Q8IUD2 1116 aa17.79■□□□□ 0.44
PCDHA9-202ENST00000532602 GNL3LQ9NVN8 582 aaKnown RBP17.79■□□□□ 0.44
PCDHA9-202ENST00000532602 NME9Q86XW9 330 aa17.79■□□□□ 0.44
PCDHA9-202ENST00000532602 ATAD2Q6PL18 1390 aa17.78■□□□□ 0.44
PCDHA9-202ENST00000532602 RRP12Q5JTH9 1297 aaKnown RBP17.78■□□□□ 0.44
PCDHA9-202ENST00000532602 C22orf23Q9BZE7 217 aa17.78■□□□□ 0.44
PCDHA9-202ENST00000532602 AKNAQ7Z591 1439 aa17.78■□□□□ 0.44
PCDHA9-202ENST00000532602 MCM10Q7L590 875 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms