RNA–Protein interactions for RNA: ENST00000532500.1

CPNE7-206, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-206ENST00000532500 GJD4Q96KN9 370 aaPredicted RBP16.52■□□□□ 0.24
CPNE7-206ENST00000532500 COL14A1Q05707 1796 aaKnown RBP16.51■□□□□ 0.23
CPNE7-206ENST00000532500 NUDT16Q96DE0 195 aaKnown RBP16.51■□□□□ 0.23
CPNE7-206ENST00000532500 STAC3Q96MF2 364 aa16.51■□□□□ 0.23
CPNE7-206ENST00000532500 CDK19Q9BWU1 502 aa16.51■□□□□ 0.23
CPNE7-206ENST00000532500 NUTM2GQ5VZR2 741 aa16.5■□□□□ 0.23
CPNE7-206ENST00000532500 L3MBTL2Q969R5 705 aa16.48■□□□□ 0.23
CPNE7-206ENST00000532500 A0A0G2JS52 829 aa16.47■□□□□ 0.23
CPNE7-206ENST00000532500 FAM83GA6ND36 823 aa16.47■□□□□ 0.23
CPNE7-206ENST00000532500 MYT1Q01538 1121 aa16.47■□□□□ 0.23
CPNE7-206ENST00000532500 SRPK2P78362 688 aaKnown RBP16.45■□□□□ 0.22
CPNE7-206ENST00000532500 BTG4Q9NY30 223 aa16.45■□□□□ 0.22
CPNE7-206ENST00000532500 ACEP12821 1306 aa16.45■□□□□ 0.22
CPNE7-206ENST00000532500 CENPJQ9HC77 1338 aaPredicted RBP16.45■□□□□ 0.22
CPNE7-206ENST00000532500 CABP2Q9NPB3 220 aa16.44■□□□□ 0.22
CPNE7-206ENST00000532500 CHRNA2Q15822 529 aa16.43■□□□□ 0.22
CPNE7-206ENST00000532500 VPS72Q15906 364 aa16.43■□□□□ 0.22
CPNE7-206ENST00000532500 SEPT12Q8IYM1 358 aa16.43■□□□□ 0.22
CPNE7-206ENST00000532500 PPIP5K1Q6PFW1 1433 aa16.43■□□□□ 0.22
CPNE7-206ENST00000532500 ZC3H6P61129 1189 aaKnown RBP16.41■□□□□ 0.22
CPNE7-206ENST00000532500 FAM98CQ17RN3 349 aaKnown RBP16.41■□□□□ 0.22
CPNE7-206ENST00000532500 PRDM11Q9NQV5 511 aa16.41■□□□□ 0.22
CPNE7-206ENST00000532500 NRKQ7Z2Y5 1582 aa16.41■□□□□ 0.22
CPNE7-206ENST00000532500 AKAP12Q02952 1782 aa16.41■□□□□ 0.22
CPNE7-206ENST00000532500 KIAA0232Q92628 1395 aa16.4■□□□□ 0.22
CPNE7-206ENST00000532500 NBPF8Q3BBV2 869 aa16.4■□□□□ 0.22
CPNE7-206ENST00000532500 CCDC61Q9Y6R9 512 aa16.4■□□□□ 0.22
CPNE7-206ENST00000532500 RGPD5Q99666 1765 aa16.39■□□□□ 0.21
CPNE7-206ENST00000532500 POLR3AO14802 1390 aaPredicted RBP16.38■□□□□ 0.21
CPNE7-206ENST00000532500 ROCK2O75116 1388 aaKnown RBP16.38■□□□□ 0.21
CPNE7-206ENST00000532500 ZBTB7CA1YPR0 619 aa16.38■□□□□ 0.21
CPNE7-206ENST00000532500 STRN4Q9NRL3 753 aa16.38■□□□□ 0.21
CPNE7-206ENST00000532500 FAM182BQ5T319 152 aa16.37■□□□□ 0.21
CPNE7-206ENST00000532500 ABTB2Q8N961 1025 aa16.37■□□□□ 0.21
CPNE7-206ENST00000532500 SRCAPQ6ZRS2 3230 aa16.37■□□□□ 0.21
CPNE7-206ENST00000532500 PIK3C2AO00443 1686 aa16.37■□□□□ 0.21
CPNE7-206ENST00000532500 PLEKHG3A1L390 1219 aa16.36■□□□□ 0.21
CPNE7-206ENST00000532500 KRT27Q7Z3Y8 459 aa16.36■□□□□ 0.21
CPNE7-206ENST00000532500 THSD7AQ9UPZ6 1657 aa16.36■□□□□ 0.21
CPNE7-206ENST00000532500 RGPD1P0DJD0 1748 aa16.36■□□□□ 0.21
CPNE7-206ENST00000532500 DEFB132Q7Z7B7 95 aa16.35■□□□□ 0.21
CPNE7-206ENST00000532500 CABP1Q9NZU7 370 aa16.35■□□□□ 0.21
CPNE7-206ENST00000532500 USP35Q9P2H5 1018 aa16.34■□□□□ 0.21
CPNE7-206ENST00000532500 BLMP54132 1417 aaPredicted RBP16.34■□□□□ 0.21
CPNE7-206ENST00000532500 LMO7Q8WWI1 1683 aa16.34■□□□□ 0.21
CPNE7-206ENST00000532500 SPATA31A5Q5VU36 1347 aa16.33■□□□□ 0.2
CPNE7-206ENST00000532500 SPATA31A7Q8IWB4 1347 aa16.33■□□□□ 0.2
CPNE7-206ENST00000532500 TNS1Q9HBL0 1735 aaKnown RBP16.33■□□□□ 0.2
CPNE7-206ENST00000532500 SF3B2Q13435 895 aaKnown RBP16.32■□□□□ 0.2
CPNE7-206ENST00000532500 CAMTA1Q9Y6Y1 1673 aa16.32■□□□□ 0.2
CPNE7-206ENST00000532500 EVC2Q86UK5 1308 aa16.31■□□□□ 0.2
CPNE7-206ENST00000532500 MON2Q7Z3U7 1717 aa16.31■□□□□ 0.2
CPNE7-206ENST00000532500 USP6P35125 1406 aa16.3■□□□□ 0.2
CPNE7-206ENST00000532500 ONECUT3O60422 494 aaPredicted RBP16.3■□□□□ 0.2
CPNE7-206ENST00000532500 EVA1CP58658 441 aa16.3■□□□□ 0.2
CPNE7-206ENST00000532500 CCDC125Q86Z20 511 aa16.3■□□□□ 0.2
CPNE7-206ENST00000532500 ZRANB1Q9UGI0 708 aa16.3■□□□□ 0.2
CPNE7-206ENST00000532500 TONSLQ96HA7 1378 aa16.29■□□□□ 0.2
CPNE7-206ENST00000532500 WNK3Q9BYP7 1800 aa16.29■□□□□ 0.2
CPNE7-206ENST00000532500 SOX12O15370 315 aa16.29■□□□□ 0.2
CPNE7-206ENST00000532500 SSH2Q76I76 1423 aa16.28■□□□□ 0.2
CPNE7-206ENST00000532500 USP19O94966 1318 aa16.28■□□□□ 0.2
CPNE7-206ENST00000532500 SPATA31A1Q5TZJ5 1347 aa16.28■□□□□ 0.2
CPNE7-206ENST00000532500 NLRP6P59044 892 aa16.28■□□□□ 0.2
CPNE7-206ENST00000532500 LARP1Q6PKG0 1096 aaKnown RBP16.28■□□□□ 0.2
CPNE7-206ENST00000532500 NLRP13Q86W25 1043 aa16.28■□□□□ 0.2
CPNE7-206ENST00000532500 COL18A1P39060 1754 aa16.28■□□□□ 0.2
CPNE7-206ENST00000532500 LTN1O94822 1766 aa16.27■□□□□ 0.2
CPNE7-206ENST00000532500 SLIT3O75094 1523 aa16.26■□□□□ 0.19
CPNE7-206ENST00000532500 GCP02774 474 aa16.26■□□□□ 0.19
CPNE7-206ENST00000532500 CARD11Q9BXL7 1154 aa16.26■□□□□ 0.19
CPNE7-206ENST00000532500 PARP4Q9UKK3 1724 aaKnown RBP16.25■□□□□ 0.19
CPNE7-206ENST00000532500 CPDO75976 1380 aa16.24■□□□□ 0.19
CPNE7-206ENST00000532500 SBF2Q86WG5 1849 aa16.24■□□□□ 0.19
CPNE7-206ENST00000532500 COL5A2P05997 1499 aaPredicted RBP16.23■□□□□ 0.19
CPNE7-206ENST00000532500 TRIM26Q12899 539 aaPredicted RBP16.23■□□□□ 0.19
CPNE7-206ENST00000532500 KTN1Q86UP2 1357 aaKnown RBP16.23■□□□□ 0.19
CPNE7-206ENST00000532500 PSDA5PKW4 1024 aaPredicted RBP16.22■□□□□ 0.19
CPNE7-206ENST00000532500 BAG6P46379 1132 aa16.22■□□□□ 0.19
CPNE7-206ENST00000532500 EN1Q05925 392 aaPredicted RBP16.22■□□□□ 0.19
CPNE7-206ENST00000532500 TMC1Q8TDI8 760 aa16.22■□□□□ 0.19
CPNE7-206ENST00000532500 KAT6BQ8WYB5 2073 aa16.22■□□□□ 0.19
CPNE7-206ENST00000532500 TTC21BQ7Z4L5 1316 aa16.21■□□□□ 0.19
CPNE7-206ENST00000532500 LRRC37A3O60309 1634 aa16.21■□□□□ 0.19
CPNE7-206ENST00000532500 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.21■□□□□ 0.19
CPNE7-206ENST00000532500 TRIM37O94972 964 aa16.2■□□□□ 0.18
CPNE7-206ENST00000532500 BRD4O60885 1362 aaPredicted RBP16.2■□□□□ 0.18
CPNE7-206ENST00000532500 PDE3BQ13370 1112 aa16.19■□□□□ 0.18
CPNE7-206ENST00000532500 TCP11L2Q8N4U5 519 aa16.19■□□□□ 0.18
CPNE7-206ENST00000532500 NUP188Q5SRE5 1749 aa16.18■□□□□ 0.18
CPNE7-206ENST00000532500 NFAT5O94916 1531 aa16.18■□□□□ 0.18
CPNE7-206ENST00000532500 CPSF1Q10570 1443 aaKnown RBP16.18■□□□□ 0.18
CPNE7-206ENST00000532500 RREB1Q92766 1687 aa16.18■□□□□ 0.18
CPNE7-206ENST00000532500 TOM1L2Q6ZVM7 507 aa16.17■□□□□ 0.18
CPNE7-206ENST00000532500 AXIN2Q9Y2T1 843 aa16.17■□□□□ 0.18
CPNE7-206ENST00000532500 CRB1P82279 1406 aa16.17■□□□□ 0.18
CPNE7-206ENST00000532500 USP54Q70EL1 1684 aa16.17■□□□□ 0.18
CPNE7-206ENST00000532500 CD163L1Q9NR16 1453 aa16.16■□□□□ 0.18
CPNE7-206ENST00000532500 AATKQ6ZMQ8 1374 aa16.16■□□□□ 0.18
CPNE7-206ENST00000532500 EZH2Q15910 746 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms