RNA–Protein interactions for RNA: ENST00000532445.1

NCAPD3-209, Transcript of non-SMC condensin II complex subunit D3, human

APPRIS ALT2 TSL 3

Gene NCAPD3, Length 532 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-209	ENST00000532445	NRAP	Q86VF7	1730 aa		33.27	■■■□□ 2.92
NCAPD3-209	ENST00000532445	ROCK2	O75116	1388 aa	Known RBP	33.26	■■■□□ 2.92
NCAPD3-209	ENST00000532445	GJD4	Q96KN9	370 aa	Predicted RBP	33.25	■■■□□ 2.91
NCAPD3-209	ENST00000532445	CCDC61	Q9Y6R9	512 aa		33.25	■■■□□ 2.91
NCAPD3-209	ENST00000532445	ATAD2	Q6PL18	1390 aa		33.24	■■■□□ 2.91
NCAPD3-209	ENST00000532445	SRPK2	P78362	688 aa	Known RBP	33.24	■■■□□ 2.91
NCAPD3-209	ENST00000532445	TRIM26	Q12899	539 aa	Predicted RBP	33.24	■■■□□ 2.91
NCAPD3-209	ENST00000532445	RALGAPB	Q86X10	1494 aa		33.24	■■■□□ 2.91
NCAPD3-209	ENST00000532445	POLR3A	O14802	1390 aa	Predicted RBP	33.23	■■■□□ 2.91
NCAPD3-209	ENST00000532445	BRWD3	Q6RI45	1802 aa		33.21	■■■□□ 2.91
NCAPD3-209	ENST00000532445	PPIP5K1	Q6PFW1	1433 aa		33.2	■■■□□ 2.91
NCAPD3-209	ENST00000532445	ACE	P12821	1306 aa		33.2	■■■□□ 2.91
NCAPD3-209	ENST00000532445	TONSL	Q96HA7	1378 aa		33.18	■■■□□ 2.9
NCAPD3-209	ENST00000532445	PLEKHG3	A1L390	1219 aa		33.17	■■■□□ 2.9
NCAPD3-209	ENST00000532445	CCDC9	Q9Y3X0	531 aa	Known RBP	33.15	■■■□□ 2.9
NCAPD3-209	ENST00000532445	VPS72	Q15906	364 aa		33.14	■■■□□ 2.9
NCAPD3-209	ENST00000532445	NBPF8	Q3BBV2	869 aa		33.14	■■■□□ 2.9
NCAPD3-209	ENST00000532445	CABP2	Q9NPB3	220 aa		33.14	■■■□□ 2.9
NCAPD3-209	ENST00000532445	FAM83G	A6ND36	823 aa		33.13	■■■□□ 2.89
NCAPD3-209	ENST00000532445	EVC2	Q86UK5	1308 aa		33.12	■■■□□ 2.89
NCAPD3-209	ENST00000532445	NRK	Q7Z2Y5	1582 aa		33.11	■■■□□ 2.89
NCAPD3-209	ENST00000532445	AKAP12	Q02952	1782 aa		33.1	■■■□□ 2.89
NCAPD3-209	ENST00000532445	BTG4	Q9NY30	223 aa		33.09	■■■□□ 2.89
NCAPD3-209	ENST00000532445	PRDM11	Q9NQV5	511 aa		33.08	■■■□□ 2.89
NCAPD3-209	ENST00000532445	BRD4	O60885	1362 aa	Predicted RBP	33.07	■■■□□ 2.88
NCAPD3-209	ENST00000532445	NUTM2G	Q5VZR2	741 aa		33.05	■■■□□ 2.88
NCAPD3-209	ENST00000532445	ABTB2	Q8N961	1025 aa		33.05	■■■□□ 2.88
NCAPD3-209	ENST00000532445	KIAA0232	Q92628	1395 aa		33.03	■■■□□ 2.88
NCAPD3-209	ENST00000532445	USP6	P35125	1406 aa		33.02	■■■□□ 2.88
NCAPD3-209	ENST00000532445	CARD11	Q9BXL7	1154 aa		33.01	■■■□□ 2.87
NCAPD3-209	ENST00000532445	SEPT12	Q8IYM1	358 aa		33	■■■□□ 2.87
NCAPD3-209	ENST00000532445	CABP1	Q9NZU7	370 aa		33	■■■□□ 2.87
NCAPD3-209	ENST00000532445	PIK3C2A	O00443	1686 aa		32.99	■■■□□ 2.87
NCAPD3-209	ENST00000532445		A0A0G2JS52	829 aa		32.99	■■■□□ 2.87
NCAPD3-209	ENST00000532445	MYT1	Q01538	1121 aa		32.99	■■■□□ 2.87
NCAPD3-209	ENST00000532445	SBNO2	Q9Y2G9	1366 aa		32.98	■■■□□ 2.87
NCAPD3-209	ENST00000532445	NLRP13	Q86W25	1043 aa		32.98	■■■□□ 2.87
NCAPD3-209	ENST00000532445	MON2	Q7Z3U7	1717 aa		32.97	■■■□□ 2.87
NCAPD3-209	ENST00000532445	ZC3H6	P61129	1189 aa	Known RBP	32.96	■■■□□ 2.87
NCAPD3-209	ENST00000532445	LMO7	Q8WWI1	1683 aa		32.96	■■■□□ 2.87
NCAPD3-209	ENST00000532445	USP19	O94966	1318 aa		32.96	■■■□□ 2.87
NCAPD3-209	ENST00000532445	ONECUT3	O60422	494 aa	Predicted RBP	32.94	■■■□□ 2.86
NCAPD3-209	ENST00000532445	CHRNA2	Q15822	529 aa		32.94	■■■□□ 2.86
NCAPD3-209	ENST00000532445	CCDC125	Q86Z20	511 aa		32.94	■■■□□ 2.86
NCAPD3-209	ENST00000532445	THSD7A	Q9UPZ6	1657 aa		32.94	■■■□□ 2.86
NCAPD3-209	ENST00000532445	FAM98C	Q17RN3	349 aa	Known RBP	32.92	■■■□□ 2.86
NCAPD3-209	ENST00000532445	SPATA31A5	Q5VU36	1347 aa		32.92	■■■□□ 2.86
NCAPD3-209	ENST00000532445	SPATA31A7	Q8IWB4	1347 aa		32.92	■■■□□ 2.86
NCAPD3-209	ENST00000532445	CPD	O75976	1380 aa		32.91	■■■□□ 2.86
NCAPD3-209	ENST00000532445	SLIT3	O75094	1523 aa		32.91	■■■□□ 2.86
NCAPD3-209	ENST00000532445	KRT27	Q7Z3Y8	459 aa		32.9	■■■□□ 2.86
NCAPD3-209	ENST00000532445	BLM	P54132	1417 aa	Predicted RBP	32.89	■■■□□ 2.86
NCAPD3-209	ENST00000532445	STRN4	Q9NRL3	753 aa		32.89	■■■□□ 2.86
NCAPD3-209	ENST00000532445	ZNF692	Q9BU19	519 aa	Predicted RBP	32.88	■■■□□ 2.85
NCAPD3-209	ENST00000532445	SSH2	Q76I76	1423 aa		32.87	■■■□□ 2.85
NCAPD3-209	ENST00000532445	EP400	Q96L91	3159 aa		32.87	■■■□□ 2.85
NCAPD3-209	ENST00000532445	CAMTA1	Q9Y6Y1	1673 aa		32.87	■■■□□ 2.85
NCAPD3-209	ENST00000532445	GC	P02774	474 aa		32.86	■■■□□ 2.85
NCAPD3-209	ENST00000532445	NLRP6	P59044	892 aa		32.86	■■■□□ 2.85
NCAPD3-209	ENST00000532445	RGPD1	P0DJD0	1748 aa		32.85	■■■□□ 2.85
NCAPD3-209	ENST00000532445	EVA1C	P58658	441 aa		32.84	■■■□□ 2.85
NCAPD3-209	ENST00000532445	SPATA31A1	Q5TZJ5	1347 aa		32.83	■■■□□ 2.85
NCAPD3-209	ENST00000532445	SF3B2	Q13435	895 aa	Known RBP	32.83	■■■□□ 2.85
NCAPD3-209	ENST00000532445	CPSF1	Q10570	1443 aa	Known RBP	32.83	■■■□□ 2.85
NCAPD3-209	ENST00000532445	KTN1	Q86UP2	1357 aa	Known RBP	32.83	■■■□□ 2.85
NCAPD3-209	ENST00000532445	TTC21A	Q8NDW8	1320 aa		32.81	■■■□□ 2.84
NCAPD3-209	ENST00000532445	TTC21B	Q7Z4L5	1316 aa		32.79	■■■□□ 2.84
NCAPD3-209	ENST00000532445	USP54	Q70EL1	1684 aa		32.79	■■■□□ 2.84
NCAPD3-209	ENST00000532445	RGPD5	Q99666	1765 aa		32.79	■■■□□ 2.84
NCAPD3-209	ENST00000532445	ZBTB7C	A1YPR0	619 aa		32.78	■■■□□ 2.84
NCAPD3-209	ENST00000532445	COL5A2	P05997	1499 aa	Predicted RBP	32.78	■■■□□ 2.84
NCAPD3-209	ENST00000532445	COL18A1	P39060	1754 aa		32.78	■■■□□ 2.84
NCAPD3-209	ENST00000532445	USP35	Q9P2H5	1018 aa		32.76	■■■□□ 2.83
NCAPD3-209	ENST00000532445	WNK3	Q9BYP7	1800 aa		32.75	■■■□□ 2.83
NCAPD3-209	ENST00000532445	PARP4	Q9UKK3	1724 aa	Known RBP	32.74	■■■□□ 2.83
NCAPD3-209	ENST00000532445	TMC1	Q8TDI8	760 aa		32.73	■■■□□ 2.83
NCAPD3-209	ENST00000532445	TNS1	Q9HBL0	1735 aa	Known RBP	32.73	■■■□□ 2.83
NCAPD3-209	ENST00000532445	AATK	Q6ZMQ8	1374 aa		32.72	■■■□□ 2.83
NCAPD3-209	ENST00000532445	LARP1	Q6PKG0	1096 aa	Known RBP	32.72	■■■□□ 2.83
NCAPD3-209	ENST00000532445	KCNH5	Q8NCM2	988 aa		32.72	■■■□□ 2.83
NCAPD3-209	ENST00000532445	LTN1	O94822	1766 aa		32.72	■■■□□ 2.83
NCAPD3-209	ENST00000532445	CD163L1	Q9NR16	1453 aa		32.72	■■■□□ 2.83
NCAPD3-209	ENST00000532445	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	32.71	■■■□□ 2.83
NCAPD3-209	ENST00000532445	CRB1	P82279	1406 aa		32.7	■■■□□ 2.83
NCAPD3-209	ENST00000532445	SLC24A1	O60721	1099 aa		32.7	■■■□□ 2.83
NCAPD3-209	ENST00000532445	BARGIN	Q6ZT62	677 aa		32.7	■■■□□ 2.83
NCAPD3-209	ENST00000532445	ZRANB1	Q9UGI0	708 aa		32.7	■■■□□ 2.83
NCAPD3-209	ENST00000532445	NFAT5	O94916	1531 aa		32.69	■■■□□ 2.82
NCAPD3-209	ENST00000532445	TCP11L2	Q8N4U5	519 aa		32.68	■■■□□ 2.82
NCAPD3-209	ENST00000532445	PUS7	Q96PZ0	661 aa	Known RBP	32.68	■■■□□ 2.82
NCAPD3-209	ENST00000532445	ABCC6	O95255	1503 aa		32.67	■■■□□ 2.82
NCAPD3-209	ENST00000532445	ST20-MTHFS	A0A0A6YYL1	179 aa		32.67	■■■□□ 2.82
NCAPD3-209	ENST00000532445	THRAP3	Q9Y2W1	955 aa	Known RBP	32.67	■■■□□ 2.82
NCAPD3-209	ENST00000532445	NINL	Q9Y2I6	1382 aa		32.67	■■■□□ 2.82
NCAPD3-209	ENST00000532445	EDC4	Q6P2E9	1401 aa	Known RBP	32.67	■■■□□ 2.82
NCAPD3-209	ENST00000532445	TERF2IP	Q9NYB0	399 aa		32.66	■■■□□ 2.82
NCAPD3-209	ENST00000532445	CLSPN	Q9HAW4	1339 aa		32.66	■■■□□ 2.82
NCAPD3-209	ENST00000532445	SOX12	O15370	315 aa		32.65	■■■□□ 2.82
NCAPD3-209	ENST00000532445	DEFB132	Q7Z7B7	95 aa		32.65	■■■□□ 2.82
NCAPD3-209	ENST00000532445	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	32.65	■■■□□ 2.82

Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms