RNA–Protein interactions for RNA: ENST00000532279.1

PPP1CA-207, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-207ENST00000532279 POLR3AO14802 1390 aaPredicted RBP32.67■■■□□ 2.82
PPP1CA-207ENST00000532279 PPIP5K1Q6PFW1 1433 aa32.67■■■□□ 2.82
PPP1CA-207ENST00000532279 SLIT2O94813 1529 aa32.67■■■□□ 2.82
PPP1CA-207ENST00000532279 PLEKHG3A1L390 1219 aa32.66■■■□□ 2.82
PPP1CA-207ENST00000532279 CRYBG1Q9Y4K1 1723 aa32.64■■■□□ 2.82
PPP1CA-207ENST00000532279 RALGAPBQ86X10 1494 aa32.62■■■□□ 2.81
PPP1CA-207ENST00000532279 EVC2Q86UK5 1308 aa32.62■■■□□ 2.81
PPP1CA-207ENST00000532279 UNC5CLQ8IV45 518 aa32.62■■■□□ 2.81
PPP1CA-207ENST00000532279 CARD11Q9BXL7 1154 aa32.62■■■□□ 2.81
PPP1CA-207ENST00000532279 NWD2Q9ULI1 1742 aa32.61■■■□□ 2.81
PPP1CA-207ENST00000532279 FAM83GA6ND36 823 aa32.58■■■□□ 2.81
PPP1CA-207ENST00000532279 NUTM2GQ5VZR2 741 aa32.58■■■□□ 2.81
PPP1CA-207ENST00000532279 GJD4Q96KN9 370 aaPredicted RBP32.58■■■□□ 2.81
PPP1CA-207ENST00000532279 CABP1Q9NZU7 370 aa32.56■■■□□ 2.8
PPP1CA-207ENST00000532279 PHRF1Q9P1Y6 1649 aaKnown RBP32.55■■■□□ 2.8
PPP1CA-207ENST00000532279 COL14A1Q05707 1796 aaKnown RBP32.55■■■□□ 2.8
PPP1CA-207ENST00000532279 UPF1Q92900 1129 aaKnown RBP eCLIP32.54■■■□□ 2.8
PPP1CA-207ENST00000532279 PCGF6Q9BYE7 350 aa32.54■■■□□ 2.8
PPP1CA-207ENST00000532279 GLI3P10071 1580 aa32.53■■■□□ 2.8
PPP1CA-207ENST00000532279 ABTB2Q8N961 1025 aa32.51■■■□□ 2.79
PPP1CA-207ENST00000532279 NRAPQ86VF7 1730 aa32.51■■■□□ 2.79
PPP1CA-207ENST00000532279 CCDC9Q9Y3X0 531 aaKnown RBP32.5■■■□□ 2.79
PPP1CA-207ENST00000532279 VPS72Q15906 364 aa32.48■■■□□ 2.79
PPP1CA-207ENST00000532279 PRDM11Q9NQV5 511 aa32.48■■■□□ 2.79
PPP1CA-207ENST00000532279 BTG4Q9NY30 223 aa32.48■■■□□ 2.79
PPP1CA-207ENST00000532279 USP6P35125 1406 aa32.47■■■□□ 2.79
PPP1CA-207ENST00000532279 SBNO2Q9Y2G9 1366 aa32.46■■■□□ 2.79
PPP1CA-207ENST00000532279 AKAP12Q02952 1782 aa32.45■■■□□ 2.78
PPP1CA-207ENST00000532279 KIAA0232Q92628 1395 aa32.45■■■□□ 2.78
PPP1CA-207ENST00000532279 NRKQ7Z2Y5 1582 aa32.44■■■□□ 2.78
PPP1CA-207ENST00000532279 ATAD2Q6PL18 1390 aa32.44■■■□□ 2.78
PPP1CA-207ENST00000532279 ZC3H6P61129 1189 aaKnown RBP32.43■■■□□ 2.78
PPP1CA-207ENST00000532279 CHRNA2Q15822 529 aa32.42■■■□□ 2.78
PPP1CA-207ENST00000532279 BRD4O60885 1362 aaPredicted RBP32.42■■■□□ 2.78
PPP1CA-207ENST00000532279 BRWD3Q6RI45 1802 aa32.4■■■□□ 2.78
PPP1CA-207ENST00000532279 NLRP13Q86W25 1043 aa32.4■■■□□ 2.78
PPP1CA-207ENST00000532279 USP19O94966 1318 aa32.39■■■□□ 2.78
PPP1CA-207ENST00000532279 PIK3C2AO00443 1686 aa32.37■■■□□ 2.77
PPP1CA-207ENST00000532279 SSH2Q76I76 1423 aa32.36■■■□□ 2.77
PPP1CA-207ENST00000532279 NLRP6P59044 892 aa32.35■■■□□ 2.77
PPP1CA-207ENST00000532279 SEPT12Q8IYM1 358 aa32.35■■■□□ 2.77
PPP1CA-207ENST00000532279 ZNF692Q9BU19 519 aaPredicted RBP32.35■■■□□ 2.77
PPP1CA-207ENST00000532279 CLSPNQ9HAW4 1339 aa32.33■■■□□ 2.77
PPP1CA-207ENST00000532279 ST20-MTHFSA0A0A6YYL1 179 aa32.33■■■□□ 2.77
PPP1CA-207ENST00000532279 MON2Q7Z3U7 1717 aa32.32■■■□□ 2.76
PPP1CA-207ENST00000532279 A0A0G2JS52 829 aa32.32■■■□□ 2.76
PPP1CA-207ENST00000532279 GCP02774 474 aa32.32■■■□□ 2.76
PPP1CA-207ENST00000532279 MYT1Q01538 1121 aa32.32■■■□□ 2.76
PPP1CA-207ENST00000532279 STRN4Q9NRL3 753 aa32.32■■■□□ 2.76
PPP1CA-207ENST00000532279 CPSF1Q10570 1443 aaKnown RBP32.32■■■□□ 2.76
PPP1CA-207ENST00000532279 KTN1Q86UP2 1357 aaKnown RBP32.32■■■□□ 2.76
PPP1CA-207ENST00000532279 TTC21BQ7Z4L5 1316 aa32.31■■■□□ 2.76
PPP1CA-207ENST00000532279 TMC1Q8TDI8 760 aa32.31■■■□□ 2.76
PPP1CA-207ENST00000532279 FAM98CQ17RN3 349 aaKnown RBP32.3■■■□□ 2.76
PPP1CA-207ENST00000532279 CPDO75976 1380 aa32.3■■■□□ 2.76
PPP1CA-207ENST00000532279 ONECUT3O60422 494 aaPredicted RBP32.29■■■□□ 2.76
PPP1CA-207ENST00000532279 SPATA31A5Q5VU36 1347 aa32.28■■■□□ 2.76
PPP1CA-207ENST00000532279 SPATA31A7Q8IWB4 1347 aa32.28■■■□□ 2.76
PPP1CA-207ENST00000532279 SLIT3O75094 1523 aa32.28■■■□□ 2.76
PPP1CA-207ENST00000532279 TESK2Q96S53 571 aa32.28■■■□□ 2.76
PPP1CA-207ENST00000532279 LMO7Q8WWI1 1683 aa32.27■■■□□ 2.76
PPP1CA-207ENST00000532279 ZBTB7CA1YPR0 619 aa32.27■■■□□ 2.76
PPP1CA-207ENST00000532279 CAMTA1Q9Y6Y1 1673 aa32.26■■■□□ 2.75
PPP1CA-207ENST00000532279 TTC21AQ8NDW8 1320 aa32.26■■■□□ 2.75
PPP1CA-207ENST00000532279 CD163L1Q9NR16 1453 aa32.25■■■□□ 2.75
PPP1CA-207ENST00000532279 USP47Q96K76 1375 aa32.25■■■□□ 2.75
PPP1CA-207ENST00000532279 EVA1CP58658 441 aa32.25■■■□□ 2.75
PPP1CA-207ENST00000532279 SLC12A5Q9H2X9 1139 aa32.25■■■□□ 2.75
PPP1CA-207ENST00000532279 TIMELESSQ9UNS1 1208 aa32.25■■■□□ 2.75
PPP1CA-207ENST00000532279 CCER1Q8TC90 406 aaPredicted RBP32.24■■■□□ 2.75
PPP1CA-207ENST00000532279 KRT27Q7Z3Y8 459 aa32.22■■■□□ 2.75
PPP1CA-207ENST00000532279 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.22■■■□□ 2.75
PPP1CA-207ENST00000532279 HDGFL2Q7Z4V5 671 aaPredicted RBP32.21■■■□□ 2.75
PPP1CA-207ENST00000532279 SPATA31A1Q5TZJ5 1347 aa32.21■■■□□ 2.75
PPP1CA-207ENST00000532279 PUS7Q96PZ0 661 aaKnown RBP32.2■■■□□ 2.75
PPP1CA-207ENST00000532279 USP35Q9P2H5 1018 aa32.2■■■□□ 2.75
PPP1CA-207ENST00000532279 SOX12O15370 315 aa32.19■■■□□ 2.74
PPP1CA-207ENST00000532279 THSD7AQ9UPZ6 1657 aa32.18■■■□□ 2.74
PPP1CA-207ENST00000532279 EP400Q96L91 3159 aa32.18■■■□□ 2.74
PPP1CA-207ENST00000532279 LARP1Q6PKG0 1096 aaKnown RBP32.18■■■□□ 2.74
PPP1CA-207ENST00000532279 SLC24A1O60721 1099 aa32.17■■■□□ 2.74
PPP1CA-207ENST00000532279 TERF2IPQ9NYB0 399 aa32.17■■■□□ 2.74
PPP1CA-207ENST00000532279 ZRANB1Q9UGI0 708 aa32.16■■■□□ 2.74
PPP1CA-207ENST00000532279 A0A1W2PP64 1363 aa32.16■■■□□ 2.74
PPP1CA-207ENST00000532279 COL5A2P05997 1499 aaPredicted RBP32.16■■■□□ 2.74
PPP1CA-207ENST00000532279 KCNH5Q8NCM2 988 aa32.15■■■□□ 2.74
PPP1CA-207ENST00000532279 COL18A1P39060 1754 aa32.14■■■□□ 2.74
PPP1CA-207ENST00000532279 NME9Q86XW9 330 aa32.14■■■□□ 2.74
PPP1CA-207ENST00000532279 CCDC125Q86Z20 511 aa32.14■■■□□ 2.74
PPP1CA-207ENST00000532279 AATKQ6ZMQ8 1374 aa32.14■■■□□ 2.74
PPP1CA-207ENST00000532279 EDC4Q6P2E9 1401 aaKnown RBP32.13■■■□□ 2.73
PPP1CA-207ENST00000532279 RGPD5Q99666 1765 aa32.12■■■□□ 2.73
PPP1CA-207ENST00000532279 TMF1P82094 1093 aa32.12■■■□□ 2.73
PPP1CA-207ENST00000532279 USP54Q70EL1 1684 aa32.11■■■□□ 2.73
PPP1CA-207ENST00000532279 BLMP54132 1417 aaPredicted RBP32.11■■■□□ 2.73
PPP1CA-207ENST00000532279 NINLQ9Y2I6 1382 aa32.11■■■□□ 2.73
PPP1CA-207ENST00000532279 NFAT5O94916 1531 aa32.1■■■□□ 2.73
PPP1CA-207ENST00000532279 USP31Q70CQ4 1352 aa32.09■■■□□ 2.73
PPP1CA-207ENST00000532279 FAM182BQ5T319 152 aa32.09■■■□□ 2.73
PPP1CA-207ENST00000532279 ARHGEF25Q86VW2 580 aa32.09■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms