RNA–Protein interactions for RNA: ENST00000532278.1

SLC43A3-220, Transcript of solute carrier family 43 member 3, humanhuman

TSL 4

Gene SLC43A3, Length 506 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A3-220ENST00000532278 PPIP5K1Q6PFW1 1433 aa33.6■■■□□ 2.97
SLC43A3-220ENST00000532278 ATRNO75882 1429 aa33.59■■■□□ 2.97
SLC43A3-220ENST00000532278 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.59■■■□□ 2.97
SLC43A3-220ENST00000532278 SLIT2O94813 1529 aa33.58■■■□□ 2.97
SLC43A3-220ENST00000532278 CABLES1Q8TDN4 633 aa33.58■■■□□ 2.97
SLC43A3-220ENST00000532278 HAP1P54257 671 aaPredicted RBP33.57■■■□□ 2.96
SLC43A3-220ENST00000532278 CRYBG1Q9Y4K1 1723 aa33.56■■■□□ 2.96
SLC43A3-220ENST00000532278 PAK3O75914 559 aaPredicted RBP33.55■■■□□ 2.96
SLC43A3-220ENST00000532278 BRD4O60885 1362 aaPredicted RBP33.53■■■□□ 2.96
SLC43A3-220ENST00000532278 TIMELESSQ9UNS1 1208 aa33.52■■■□□ 2.96
SLC43A3-220ENST00000532278 NWD2Q9ULI1 1742 aa33.52■■■□□ 2.96
SLC43A3-220ENST00000532278 UNC5CLQ8IV45 518 aa33.5■■■□□ 2.95
SLC43A3-220ENST00000532278 RGS12O14924 1447 aa33.49■■■□□ 2.95
SLC43A3-220ENST00000532278 CABP1Q9NZU7 370 aa33.49■■■□□ 2.95
SLC43A3-220ENST00000532278 PLCH1Q4KWH8 1693 aa33.48■■■□□ 2.95
SLC43A3-220ENST00000532278 ATAD2Q6PL18 1390 aa33.47■■■□□ 2.95
SLC43A3-220ENST00000532278 PLEKHG5O94827 1062 aa33.45■■■□□ 2.95
SLC43A3-220ENST00000532278 FAM83GA6ND36 823 aa33.44■■■□□ 2.94
SLC43A3-220ENST00000532278 USP6P35125 1406 aa33.44■■■□□ 2.94
SLC43A3-220ENST00000532278 COL14A1Q05707 1796 aaKnown RBP33.43■■■□□ 2.94
SLC43A3-220ENST00000532278 PHRF1Q9P1Y6 1649 aaKnown RBP33.42■■■□□ 2.94
SLC43A3-220ENST00000532278 GJD4Q96KN9 370 aaPredicted RBP33.42■■■□□ 2.94
SLC43A3-220ENST00000532278 SSH2Q76I76 1423 aa33.4■■■□□ 2.94
SLC43A3-220ENST00000532278 ABTB2Q8N961 1025 aa33.4■■■□□ 2.94
SLC43A3-220ENST00000532278 ZNF692Q9BU19 519 aaPredicted RBP33.39■■■□□ 2.94
SLC43A3-220ENST00000532278 AKAP12Q02952 1782 aa33.39■■■□□ 2.94
SLC43A3-220ENST00000532278 VPS72Q15906 364 aa33.38■■■□□ 2.93
SLC43A3-220ENST00000532278 PUS7Q96PZ0 661 aaKnown RBP33.38■■■□□ 2.93
SLC43A3-220ENST00000532278 NRAPQ86VF7 1730 aa33.37■■■□□ 2.93
SLC43A3-220ENST00000532278 USP19O94966 1318 aa33.37■■■□□ 2.93
SLC43A3-220ENST00000532278 GLI3P10071 1580 aa33.36■■■□□ 2.93
SLC43A3-220ENST00000532278 SLC24A1O60721 1099 aa33.36■■■□□ 2.93
SLC43A3-220ENST00000532278 CPSF1Q10570 1443 aaKnown RBP33.36■■■□□ 2.93
SLC43A3-220ENST00000532278 NUTM2GQ5VZR2 741 aa33.34■■■□□ 2.93
SLC43A3-220ENST00000532278 NLRP13Q86W25 1043 aa33.34■■■□□ 2.93
SLC43A3-220ENST00000532278 TESK2Q96S53 571 aa33.34■■■□□ 2.93
SLC43A3-220ENST00000532278 NRKQ7Z2Y5 1582 aa33.33■■■□□ 2.93
SLC43A3-220ENST00000532278 ST20-MTHFSA0A0A6YYL1 179 aa33.32■■■□□ 2.92
SLC43A3-220ENST00000532278 PRDM11Q9NQV5 511 aa33.32■■■□□ 2.92
SLC43A3-220ENST00000532278 KIAA0232Q92628 1395 aa33.32■■■□□ 2.92
SLC43A3-220ENST00000532278 BTG4Q9NY30 223 aa33.31■■■□□ 2.92
SLC43A3-220ENST00000532278 CPDO75976 1380 aa33.3■■■□□ 2.92
SLC43A3-220ENST00000532278 UPF1Q92900 1129 aaKnown RBP eCLIP33.29■■■□□ 2.92
SLC43A3-220ENST00000532278 PIK3C2AO00443 1686 aa33.28■■■□□ 2.92
SLC43A3-220ENST00000532278 MON2Q7Z3U7 1717 aa33.28■■■□□ 2.92
SLC43A3-220ENST00000532278 USP47Q96K76 1375 aa33.27■■■□□ 2.92
SLC43A3-220ENST00000532278 CCER1Q8TC90 406 aaPredicted RBP33.27■■■□□ 2.92
SLC43A3-220ENST00000532278 TTC21BQ7Z4L5 1316 aa33.27■■■□□ 2.92
SLC43A3-220ENST00000532278 TTC21AQ8NDW8 1320 aa33.27■■■□□ 2.92
SLC43A3-220ENST00000532278 KTN1Q86UP2 1357 aaKnown RBP33.25■■■□□ 2.91
SLC43A3-220ENST00000532278 SLIT3O75094 1523 aa33.25■■■□□ 2.91
SLC43A3-220ENST00000532278 ONECUT3O60422 494 aaPredicted RBP33.25■■■□□ 2.91
SLC43A3-220ENST00000532278 GCP02774 474 aa33.25■■■□□ 2.91
SLC43A3-220ENST00000532278 CD163L1Q9NR16 1453 aa33.25■■■□□ 2.91
SLC43A3-220ENST00000532278 NLRP6P59044 892 aa33.24■■■□□ 2.91
SLC43A3-220ENST00000532278 ZC3H6P61129 1189 aaKnown RBP33.24■■■□□ 2.91
SLC43A3-220ENST00000532278 NINLQ9Y2I6 1382 aa33.22■■■□□ 2.91
SLC43A3-220ENST00000532278 CCDC9Q9Y3X0 531 aaKnown RBP33.21■■■□□ 2.91
SLC43A3-220ENST00000532278 EP400Q96L91 3159 aa33.21■■■□□ 2.91
SLC43A3-220ENST00000532278 CHRNA2Q15822 529 aa33.2■■■□□ 2.91
SLC43A3-220ENST00000532278 LMO7Q8WWI1 1683 aa33.2■■■□□ 2.9
SLC43A3-220ENST00000532278 TMC1Q8TDI8 760 aa33.18■■■□□ 2.9
SLC43A3-220ENST00000532278 SLC12A5Q9H2X9 1139 aa33.18■■■□□ 2.9
SLC43A3-220ENST00000532278 SPATA31A5Q5VU36 1347 aa33.18■■■□□ 2.9
SLC43A3-220ENST00000532278 SPATA31A7Q8IWB4 1347 aa33.18■■■□□ 2.9
SLC43A3-220ENST00000532278 HDGFL2Q7Z4V5 671 aaPredicted RBP33.17■■■□□ 2.9
SLC43A3-220ENST00000532278 TERF2IPQ9NYB0 399 aa33.16■■■□□ 2.9
SLC43A3-220ENST00000532278 BRWD3Q6RI45 1802 aa33.16■■■□□ 2.9
SLC43A3-220ENST00000532278 SEPT12Q8IYM1 358 aa33.15■■■□□ 2.9
SLC43A3-220ENST00000532278 CAMTA1Q9Y6Y1 1673 aa33.15■■■□□ 2.9
SLC43A3-220ENST00000532278 USP54Q70EL1 1684 aa33.14■■■□□ 2.9
SLC43A3-220ENST00000532278 TMF1P82094 1093 aa33.14■■■□□ 2.9
SLC43A3-220ENST00000532278 EDC4Q6P2E9 1401 aaKnown RBP33.13■■■□□ 2.89
SLC43A3-220ENST00000532278 USP31Q70CQ4 1352 aa33.13■■■□□ 2.89
SLC43A3-220ENST00000532278 A0A1W2PP64 1363 aa33.12■■■□□ 2.89
SLC43A3-220ENST00000532278 KCNH5Q8NCM2 988 aa33.12■■■□□ 2.89
SLC43A3-220ENST00000532278 AATKQ6ZMQ8 1374 aa33.11■■■□□ 2.89
SLC43A3-220ENST00000532278 SPATA31A1Q5TZJ5 1347 aa33.1■■■□□ 2.89
SLC43A3-220ENST00000532278 FAM98CQ17RN3 349 aaKnown RBP33.08■■■□□ 2.89
SLC43A3-220ENST00000532278 STRN4Q9NRL3 753 aa33.08■■■□□ 2.89
SLC43A3-220ENST00000532278 COL18A1P39060 1754 aa33.07■■■□□ 2.88
SLC43A3-220ENST00000532278 CDCA8Q53HL2 280 aa33.07■■■□□ 2.88
SLC43A3-220ENST00000532278 THSD7AQ9UPZ6 1657 aa33.07■■■□□ 2.88
SLC43A3-220ENST00000532278 EVA1CP58658 441 aa33.06■■■□□ 2.88
SLC43A3-220ENST00000532278 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.06■■■□□ 2.88
SLC43A3-220ENST00000532278 NFAT5O94916 1531 aa33.06■■■□□ 2.88
SLC43A3-220ENST00000532278 COL5A2P05997 1499 aaPredicted RBP33.05■■■□□ 2.88
SLC43A3-220ENST00000532278 ARHGEF25Q86VW2 580 aa33.05■■■□□ 2.88
SLC43A3-220ENST00000532278 CCDC125Q86Z20 511 aa33.04■■■□□ 2.88
SLC43A3-220ENST00000532278 KRT27Q7Z3Y8 459 aa33.03■■■□□ 2.88
SLC43A3-220ENST00000532278 ANKRD36BQ8N2N9 1353 aa33.03■■■□□ 2.88
SLC43A3-220ENST00000532278 NME9Q86XW9 330 aa33.02■■■□□ 2.88
SLC43A3-220ENST00000532278 ABCC6O95255 1503 aa33.02■■■□□ 2.88
SLC43A3-220ENST00000532278 LARP1Q6PKG0 1096 aaKnown RBP33.01■■■□□ 2.87
SLC43A3-220ENST00000532278 BARGINQ6ZT62 677 aa33■■■□□ 2.87
SLC43A3-220ENST00000532278 ZRANB1Q9UGI0 708 aa32.99■■■□□ 2.87
SLC43A3-220ENST00000532278 A0A0G2JS52 829 aa32.98■■■□□ 2.87
SLC43A3-220ENST00000532278 OVOS2A0A0J9YW53 1432 aa32.98■■■□□ 2.87
SLC43A3-220ENST00000532278 MYT1Q01538 1121 aa32.98■■■□□ 2.87
SLC43A3-220ENST00000532278 OVOS2Q6IE36 1432 aa32.98■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms