RNA–Protein interactions for RNA: ENST00000531983.1

RBBP4-219, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 473 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-219ENST00000531983 CADPS2Q86UW7 1296 aa8.65□□□□□ -1.02
RBBP4-219ENST00000531983 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.65□□□□□ -1.02
RBBP4-219ENST00000531983 CIZ1Q9ULV3 898 aaPredicted RBP8.65□□□□□ -1.02
RBBP4-219ENST00000531983 NHSL1Q5SYE7 1610 aa8.65□□□□□ -1.03
RBBP4-219ENST00000531983 ADAMTS13Q76LX8 1427 aa8.64□□□□□ -1.03
RBBP4-219ENST00000531983 SPOCK2Q92563 424 aa8.64□□□□□ -1.03
RBBP4-219ENST00000531983 CDK12Q9NYV4 1490 aaPredicted RBP8.64□□□□□ -1.03
RBBP4-219ENST00000531983 SPHKAPQ2M3C7 1700 aa8.63□□□□□ -1.03
RBBP4-219ENST00000531983 LOC105371045A0A1W2PR82 267 aa8.63□□□□□ -1.03
RBBP4-219ENST00000531983 RIMBP2O15034 1052 aa8.63□□□□□ -1.03
RBBP4-219ENST00000531983 RNF166Q96A37 237 aaPredicted RBP8.63□□□□□ -1.03
RBBP4-219ENST00000531983 TRIM52Q96A61 297 aa8.63□□□□□ -1.03
RBBP4-219ENST00000531983 SETBP1Q9Y6X0 1596 aa8.63□□□□□ -1.03
RBBP4-219ENST00000531983 NRXN3Q9Y4C0 1643 aa8.62□□□□□ -1.03
RBBP4-219ENST00000531983 TBX22Q9Y458 520 aa8.62□□□□□ -1.03
RBBP4-219ENST00000531983 NALCNQ8IZF0 1738 aa8.62□□□□□ -1.03
RBBP4-219ENST00000531983 VARS2Q5ST30 1063 aaKnown RBP8.61□□□□□ -1.03
RBBP4-219ENST00000531983 ROCK1Q13464 1354 aa8.61□□□□□ -1.03
RBBP4-219ENST00000531983 C19orf44Q9H6X5 657 aa8.6□□□□□ -1.03
RBBP4-219ENST00000531983 MST1RQ04912 1400 aa8.6□□□□□ -1.03
RBBP4-219ENST00000531983 ADGRL3Q9HAR2 1447 aa8.6□□□□□ -1.03
RBBP4-219ENST00000531983 NUTM2BA6NNL0 878 aaPredicted RBP8.59□□□□□ -1.03
RBBP4-219ENST00000531983 NUTM2EB1AL46 878 aaPredicted RBP8.59□□□□□ -1.03
RBBP4-219ENST00000531983 NUTM2DQ5VT03 806 aaPredicted RBP8.59□□□□□ -1.03
RBBP4-219ENST00000531983 BRINP3Q76B58 766 aa8.59□□□□□ -1.03
RBBP4-219ENST00000531983 IFNLR1Q8IU57 520 aaPredicted RBP8.59□□□□□ -1.03
RBBP4-219ENST00000531983 NUTM2AQ8IVF1 878 aaPredicted RBP8.59□□□□□ -1.03
RBBP4-219ENST00000531983 RGS12O14924 1447 aa8.59□□□□□ -1.03
RBBP4-219ENST00000531983 SETD5Q9C0A6 1442 aa8.59□□□□□ -1.03
RBBP4-219ENST00000531983 RXRBP28702 533 aa8.58□□□□□ -1.04
RBBP4-219ENST00000531983 EFCAB3Q8N7B9 438 aa8.58□□□□□ -1.04
RBBP4-219ENST00000531983 ZSWIM6Q9HCJ5 1215 aa8.58□□□□□ -1.04
RBBP4-219ENST00000531983 NUP155O75694 1391 aa8.58□□□□□ -1.04
RBBP4-219ENST00000531983 AFF2P51816 1311 aa8.57□□□□□ -1.04
RBBP4-219ENST00000531983 PTPRUQ92729 1446 aa8.57□□□□□ -1.04
RBBP4-219ENST00000531983 UPF1Q92900 1129 aaKnown RBP eCLIP8.57□□□□□ -1.04
RBBP4-219ENST00000531983 AMOTL2Q9Y2J4 779 aa8.57□□□□□ -1.04
RBBP4-219ENST00000531983 NEXMIFQ5QGS0 1516 aa8.57□□□□□ -1.04
RBBP4-219ENST00000531983 CLTCL1P53675 1640 aa8.57□□□□□ -1.04
RBBP4-219ENST00000531983 PTCH1Q13635 1447 aa8.56□□□□□ -1.04
RBBP4-219ENST00000531983 ZNF326Q5BKZ1 582 aaKnown RBP8.56□□□□□ -1.04
RBBP4-219ENST00000531983 MICALL2Q8IY33 904 aa8.56□□□□□ -1.04
RBBP4-219ENST00000531983 LAMC1P11047 1609 aa8.55□□□□□ -1.04
RBBP4-219ENST00000531983 C8orf37Q96NL8 207 aa8.55□□□□□ -1.04
RBBP4-219ENST00000531983 ATAD2Q6PL18 1390 aa8.55□□□□□ -1.04
RBBP4-219ENST00000531983 PNPLA6Q8IY17 1366 aa8.55□□□□□ -1.04
RBBP4-219ENST00000531983 KIF1BO60333 1816 aa8.54□□□□□ -1.04
RBBP4-219ENST00000531983 TMEM92Q6UXU6 159 aa8.54□□□□□ -1.04
RBBP4-219ENST00000531983 ZNF687Q8N1G0 1237 aa8.54□□□□□ -1.04
RBBP4-219ENST00000531983 LRRC59Q96AG4 307 aaKnown RBP8.54□□□□□ -1.04
RBBP4-219ENST00000531983 COL22A1Q8NFW1 1626 aaPredicted RBP8.54□□□□□ -1.04
RBBP4-219ENST00000531983 CDC42BPGQ6DT37 1551 aa8.53□□□□□ -1.04
RBBP4-219ENST00000531983 METP08581 1390 aa8.53□□□□□ -1.04
RBBP4-219ENST00000531983 C1orf167Q5SNV9 1468 aa8.52□□□□□ -1.05
RBBP4-219ENST00000531983 PTGER2P43116 358 aa8.52□□□□□ -1.05
RBBP4-219ENST00000531983 RBM6P78332 1123 aaKnown RBP8.52□□□□□ -1.05
RBBP4-219ENST00000531983 NGLY1Q96IV0 654 aa8.52□□□□□ -1.05
RBBP4-219ENST00000531983 SRCAPQ6ZRS2 3230 aa8.51□□□□□ -1.05
RBBP4-219ENST00000531983 ITGAEP38570 1179 aa8.51□□□□□ -1.05
RBBP4-219ENST00000531983 GPR153Q6NV75 609 aa8.51□□□□□ -1.05
RBBP4-219ENST00000531983 PRAG1Q86YV5 1406 aa8.51□□□□□ -1.05
RBBP4-219ENST00000531983 HFM1A2PYH4 1435 aa8.5□□□□□ -1.05
RBBP4-219ENST00000531983 ADAMTS2O95450 1211 aa8.5□□□□□ -1.05
RBBP4-219ENST00000531983 EP400Q96L91 3159 aa8.5□□□□□ -1.05
RBBP4-219ENST00000531983 MARF1Q9Y4F3 1742 aaKnown RBP8.49□□□□□ -1.05
RBBP4-219ENST00000531983 DDX17Q92841 729 aaKnown RBP8.49□□□□□ -1.05
RBBP4-219ENST00000531983 QTRT2Q9H974 415 aaKnown RBP8.49□□□□□ -1.05
RBBP4-219ENST00000531983 PPLO60437 1756 aa8.48□□□□□ -1.05
RBBP4-219ENST00000531983 SOX12O15370 315 aa8.48□□□□□ -1.05
RBBP4-219ENST00000531983 USP21Q9UK80 565 aa8.48□□□□□ -1.05
RBBP4-219ENST00000531983 MYOM2P54296 1465 aa8.48□□□□□ -1.05
RBBP4-219ENST00000531983 KIF1AQ12756 1690 aa8.48□□□□□ -1.05
RBBP4-219ENST00000531983 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.48□□□□□ -1.05
RBBP4-219ENST00000531983 ATRNO75882 1429 aa8.47□□□□□ -1.05
RBBP4-219ENST00000531983 MS4A4AQ96JQ5 239 aa8.47□□□□□ -1.05
RBBP4-219ENST00000531983 TRPC5Q9UL62 973 aaPredicted RBP8.47□□□□□ -1.05
RBBP4-219ENST00000531983 NPHP3Q7Z494 1330 aa8.47□□□□□ -1.05
RBBP4-219ENST00000531983 ROBO2Q9HCK4 1378 aa8.47□□□□□ -1.05
RBBP4-219ENST00000531983 KNDC1Q76NI1 1749 aa8.46□□□□□ -1.05
RBBP4-219ENST00000531983 PXDNQ92626 1479 aa8.46□□□□□ -1.05
RBBP4-219ENST00000531983 SOS2Q07890 1332 aaPredicted RBP8.46□□□□□ -1.06
RBBP4-219ENST00000531983 USP32Q8NFA0 1604 aa8.45□□□□□ -1.06
RBBP4-219ENST00000531983 ARSIQ5FYB1 569 aa8.45□□□□□ -1.06
RBBP4-219ENST00000531983 LRPPRCP42704 1394 aaKnown RBP8.45□□□□□ -1.06
RBBP4-219ENST00000531983 VGFO15240 615 aaPredicted RBP8.44□□□□□ -1.06
RBBP4-219ENST00000531983 ANKRD13DQ6ZTN6 518 aa8.44□□□□□ -1.06
RBBP4-219ENST00000531983 CCDC144AA2RUR9 1427 aa8.44□□□□□ -1.06
RBBP4-219ENST00000531983 NAIPQ13075 1403 aa8.44□□□□□ -1.06
RBBP4-219ENST00000531983 RRBP1Q9P2E9 1410 aaKnown RBP8.44□□□□□ -1.06
RBBP4-219ENST00000531983 FMN2Q9NZ56 1722 aa8.43□□□□□ -1.06
RBBP4-219ENST00000531983 IFT172Q9UG01 1749 aa8.43□□□□□ -1.06
RBBP4-219ENST00000531983 RIOK3O14730 519 aaKnown RBP8.43□□□□□ -1.06
RBBP4-219ENST00000531983 ORAI2Q96SN7 254 aa8.43□□□□□ -1.06
RBBP4-219ENST00000531983 PHF8Q9UPP1 1060 aa8.43□□□□□ -1.06
RBBP4-219ENST00000531983 PLCH1Q4KWH8 1693 aa8.43□□□□□ -1.06
RBBP4-219ENST00000531983 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.42□□□□□ -1.06
RBBP4-219ENST00000531983 ZNF316A6NFI3 1004 aaPredicted RBP8.42□□□□□ -1.06
RBBP4-219ENST00000531983 ESCO1Q5FWF5 840 aa8.42□□□□□ -1.06
RBBP4-219ENST00000531983 FNBP4Q8N3X1 1017 aaPredicted RBP8.42□□□□□ -1.06
RBBP4-219ENST00000531983 ZFP91Q96JP5 570 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms