RNA–Protein interactions for RNA: ENST00000531582.1

ECHDC1-221, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 4

Gene ECHDC1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-221ENST00000531582 ZC3H4Q9UPT8 1303 aaKnown RBP6.84□□□□□ -1.31
ECHDC1-221ENST00000531582 S1PR4O95977 384 aa6.84□□□□□ -1.31
ECHDC1-221ENST00000531582 KCNH2Q12809 1159 aa6.84□□□□□ -1.31
ECHDC1-221ENST00000531582 ANKLE1Q8NAG6 615 aa6.84□□□□□ -1.31
ECHDC1-221ENST00000531582 GPKOWQ92917 476 aaPredicted RBP eCLIP6.84□□□□□ -1.31
ECHDC1-221ENST00000531582 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.84□□□□□ -1.31
ECHDC1-221ENST00000531582 SNRKQ9NRH2 765 aa6.84□□□□□ -1.31
ECHDC1-221ENST00000531582 NDUFB9Q9Y6M9 179 aa6.84□□□□□ -1.31
ECHDC1-221ENST00000531582 MTMR14Q8NCE2 650 aa6.83□□□□□ -1.32
ECHDC1-221ENST00000531582 A6NJR5 290 aa6.82□□□□□ -1.32
ECHDC1-221ENST00000531582 PER1O15534 1290 aaPredicted RBP6.82□□□□□ -1.32
ECHDC1-221ENST00000531582 ZBTB24O43167 697 aaPredicted RBP6.82□□□□□ -1.32
ECHDC1-221ENST00000531582 F12P00748 615 aaPredicted RBP6.82□□□□□ -1.32
ECHDC1-221ENST00000531582 CTHP32929 405 aa6.82□□□□□ -1.32
ECHDC1-221ENST00000531582 LRRN4Q8WUT4 740 aa6.82□□□□□ -1.32
ECHDC1-221ENST00000531582 ZMYND15Q9H091 742 aa6.82□□□□□ -1.32
ECHDC1-221ENST00000531582 PRDM9Q9NQV7 894 aa6.82□□□□□ -1.32
ECHDC1-221ENST00000531582 PLA2G2EQ9NZK7 142 aa6.82□□□□□ -1.32
ECHDC1-221ENST00000531582 PPP1R18Q6NYC8 613 aa6.81□□□□□ -1.32
ECHDC1-221ENST00000531582 CCDC24Q8N4L8 307 aa6.81□□□□□ -1.32
ECHDC1-221ENST00000531582 FCF1Q9Y324 198 aaKnown RBP6.81□□□□□ -1.32
ECHDC1-221ENST00000531582 RNF223E7ERA6 249 aa6.8□□□□□ -1.32
ECHDC1-221ENST00000531582 NBPF14Q5TI25 921 aa6.8□□□□□ -1.32
ECHDC1-221ENST00000531582 ZNF592Q92610 1267 aa6.8□□□□□ -1.32
ECHDC1-221ENST00000531582 GJD4Q96KN9 370 aaPredicted RBP6.8□□□□□ -1.32
ECHDC1-221ENST00000531582 RPIAP49247 311 aa6.79□□□□□ -1.32
ECHDC1-221ENST00000531582 NR6A1Q15406 480 aa6.79□□□□□ -1.32
ECHDC1-221ENST00000531582 WASHC4Q2M389 1173 aa6.79□□□□□ -1.32
ECHDC1-221ENST00000531582 HMX1Q9NP08 348 aaPredicted RBP6.79□□□□□ -1.32
ECHDC1-221ENST00000531582 FKBPLQ9UIM3 349 aa6.79□□□□□ -1.32
ECHDC1-221ENST00000531582 GPSM3Q9Y4H4 160 aa6.79□□□□□ -1.32
ECHDC1-221ENST00000531582 DCAF1Q9Y4B6 1507 aa6.78□□□□□ -1.32
ECHDC1-221ENST00000531582 TRIM34Q9BYJ4 488 aa6.78□□□□□ -1.32
ECHDC1-221ENST00000531582 UNC93B1Q9H1C4 597 aa6.78□□□□□ -1.32
ECHDC1-221ENST00000531582 COG6Q9Y2V7 657 aa6.78□□□□□ -1.32
ECHDC1-221ENST00000531582 ZNF330Q9Y3S2 320 aaPredicted RBP6.78□□□□□ -1.32
ECHDC1-221ENST00000531582 A0A0G2JS52 829 aa6.77□□□□□ -1.33
ECHDC1-221ENST00000531582 CD2BP2O95400 341 aaKnown RBP6.77□□□□□ -1.33
ECHDC1-221ENST00000531582 HSP90B1P14625 803 aaKnown RBP6.77□□□□□ -1.33
ECHDC1-221ENST00000531582 AAMPQ13685 434 aa6.77□□□□□ -1.33
ECHDC1-221ENST00000531582 PDXDC2PQ6P474 469 aa6.77□□□□□ -1.33
ECHDC1-221ENST00000531582 MAP10Q9P2G4 905 aa6.77□□□□□ -1.33
ECHDC1-221ENST00000531582 HMGB1P09429 215 aaKnown RBP6.76□□□□□ -1.33
ECHDC1-221ENST00000531582 MCCD1P59942 119 aaPredicted RBP6.76□□□□□ -1.33
ECHDC1-221ENST00000531582 PTK2Q05397 1052 aa6.76□□□□□ -1.33
ECHDC1-221ENST00000531582 PROSER2Q86WR7 435 aaPredicted RBP6.76□□□□□ -1.33
ECHDC1-221ENST00000531582 GDPD2Q9HCC8 539 aa6.76□□□□□ -1.33
ECHDC1-221ENST00000531582 BCCIPQ9P287 314 aaKnown RBP eCLIP6.76□□□□□ -1.33
ECHDC1-221ENST00000531582 PPEF1O14829 653 aaPredicted RBP6.75□□□□□ -1.33
ECHDC1-221ENST00000531582 RGS20O76081 388 aa6.75□□□□□ -1.33
ECHDC1-221ENST00000531582 ABL2P42684 1182 aa6.75□□□□□ -1.33
ECHDC1-221ENST00000531582 WNT7BP56706 349 aa6.75□□□□□ -1.33
ECHDC1-221ENST00000531582 TBC1D2BQ9UPU7 963 aa6.75□□□□□ -1.33
ECHDC1-221ENST00000531582 CDK11BP21127 795 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-221ENST00000531582 SOX11P35716 441 aa6.74□□□□□ -1.33
ECHDC1-221ENST00000531582 PTCRAQ6ISU1 281 aaPredicted RBP6.74□□□□□ -1.33
ECHDC1-221ENST00000531582 BPHLQ86WA6 291 aaPredicted RBP6.74□□□□□ -1.33
ECHDC1-221ENST00000531582 CHMP4AQ9BY43 222 aa6.74□□□□□ -1.33
ECHDC1-221ENST00000531582 PCGF6Q9BYE7 350 aa6.74□□□□□ -1.33
ECHDC1-221ENST00000531582 ZBBXA8MT70 800 aa6.73□□□□□ -1.33
ECHDC1-221ENST00000531582 EPS8L1Q8TE68 723 aa6.73□□□□□ -1.33
ECHDC1-221ENST00000531582 CLUAP1Q96AJ1 413 aa6.73□□□□□ -1.33
ECHDC1-221ENST00000531582 V9GY48 417 aaPredicted RBP6.73□□□□□ -1.33
ECHDC1-221ENST00000531582 TRAK2O60296 914 aa6.72□□□□□ -1.33
ECHDC1-221ENST00000531582 SLC19A1P41440 591 aa6.72□□□□□ -1.33
ECHDC1-221ENST00000531582 EIF4G2P78344 907 aaKnown RBP eCLIP6.72□□□□□ -1.33
ECHDC1-221ENST00000531582 TRIM32Q13049 653 aa6.72□□□□□ -1.33
ECHDC1-221ENST00000531582 NR1H3Q13133 447 aa6.72□□□□□ -1.33
ECHDC1-221ENST00000531582 FNBP4Q8N3X1 1017 aaPredicted RBP6.72□□□□□ -1.33
ECHDC1-221ENST00000531582 ZNF511Q8NB15 262 aa6.72□□□□□ -1.33
ECHDC1-221ENST00000531582 BAP1Q92560 729 aa6.72□□□□□ -1.33
ECHDC1-221ENST00000531582 POM121Q96HA1 1249 aa6.72□□□□□ -1.33
ECHDC1-221ENST00000531582 ARHGAP9Q9BRR9 750 aa6.71□□□□□ -1.34
ECHDC1-221ENST00000531582 CDV3Q9UKY7 258 aaKnown RBP6.71□□□□□ -1.34
ECHDC1-221ENST00000531582 VARSP26640 1264 aaKnown RBP6.7□□□□□ -1.34
ECHDC1-221ENST00000531582 AGERQ15109 404 aa6.7□□□□□ -1.34
ECHDC1-221ENST00000531582 SH3BP5LQ7L8J4 393 aa6.7□□□□□ -1.34
ECHDC1-221ENST00000531582 ZBTB33Q86T24 672 aa6.7□□□□□ -1.34
ECHDC1-221ENST00000531582 TRIM52Q96A61 297 aa6.7□□□□□ -1.34
ECHDC1-221ENST00000531582 IRF5Q13568 498 aa6.69□□□□□ -1.34
ECHDC1-221ENST00000531582 PLA2G2CQ5R387 149 aa6.69□□□□□ -1.34
ECHDC1-221ENST00000531582 CCDC125Q86Z20 511 aa6.69□□□□□ -1.34
ECHDC1-221ENST00000531582 SH3BP2P78314 561 aa6.68□□□□□ -1.34
ECHDC1-221ENST00000531582 SPRYD7Q5W111 196 aa6.68□□□□□ -1.34
ECHDC1-221ENST00000531582 LIAT1Q6ZQX7 453 aa6.68□□□□□ -1.34
ECHDC1-221ENST00000531582 SH3RF1Q7Z6J0 888 aa6.68□□□□□ -1.34
ECHDC1-221ENST00000531582 ZNF598Q86UK7 904 aaKnown RBP6.68□□□□□ -1.34
ECHDC1-221ENST00000531582 FAM174AQ8TBP5 190 aa6.68□□□□□ -1.34
ECHDC1-221ENST00000531582 ARID3AQ99856 593 aa6.68□□□□□ -1.34
ECHDC1-221ENST00000531582 GPR37L1O60883 481 aa6.67□□□□□ -1.34
ECHDC1-221ENST00000531582 FBXO45P0C2W1 286 aa6.67□□□□□ -1.34
ECHDC1-221ENST00000531582 SEMA3FQ13275 785 aa6.67□□□□□ -1.34
ECHDC1-221ENST00000531582 LINC01559Q495D7 138 aa6.67□□□□□ -1.34
ECHDC1-221ENST00000531582 MPNDQ8N594 471 aa6.67□□□□□ -1.34
ECHDC1-221ENST00000531582 YTHDC1Q96MU7 727 aaKnown RBP6.67□□□□□ -1.34
ECHDC1-221ENST00000531582 PRKD2Q9BZL6 878 aa6.67□□□□□ -1.34
ECHDC1-221ENST00000531582 VAC14Q08AM6 782 aa6.66□□□□□ -1.34
ECHDC1-221ENST00000531582 TRMT44Q8IYL2 757 aaKnown RBP6.66□□□□□ -1.34
ECHDC1-221ENST00000531582 EHBP1Q8NDI1 1231 aa6.66□□□□□ -1.34
ECHDC1-221ENST00000531582 MAGEB6P1A0A0J9YX57 407 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms