RNA–Protein interactions for RNA: ENST00000531546.1

CASP4-210, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 921 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-210ENST00000531546 GIGYF2Q6Y7W6 1299 aaKnown RBP11.93□□□□□ -0.5
CASP4-210ENST00000531546 BARGINQ6ZT62 677 aa11.92□□□□□ -0.5
CASP4-210ENST00000531546 ZFP42Q96MM3 310 aa11.91□□□□□ -0.5
CASP4-210ENST00000531546 ADH1CP00326 375 aa11.9□□□□□ -0.5
CASP4-210ENST00000531546 BEGAINQ9BUH8 593 aa11.9□□□□□ -0.5
CASP4-210ENST00000531546 H3BM21 787 aa11.89□□□□□ -0.51
CASP4-210ENST00000531546 ZMYND10O75800 440 aa11.89□□□□□ -0.51
CASP4-210ENST00000531546 GMPRP36959 345 aa11.89□□□□□ -0.51
CASP4-210ENST00000531546 SCARF1Q14162 830 aa11.89□□□□□ -0.51
CASP4-210ENST00000531546 MRPL14Q6P1L8 145 aaKnown RBP11.89□□□□□ -0.51
CASP4-210ENST00000531546 FAM174AQ8TBP5 190 aa11.89□□□□□ -0.51
CASP4-210ENST00000531546 CTHP32929 405 aa11.88□□□□□ -0.51
CASP4-210ENST00000531546 ZSCAN1Q8NBB4 408 aa11.87□□□□□ -0.51
CASP4-210ENST00000531546 TIMP2P16035 220 aa11.86□□□□□ -0.51
CASP4-210ENST00000531546 WDR4P57081 412 aaKnown RBP11.86□□□□□ -0.51
CASP4-210ENST00000531546 RSBN1LQ6PCB5 846 aaPredicted RBP11.86□□□□□ -0.51
CASP4-210ENST00000531546 LYPD8Q6UX82 237 aa11.86□□□□□ -0.51
CASP4-210ENST00000531546 TBC1D2Q9BYX2 928 aa11.86□□□□□ -0.51
CASP4-210ENST00000531546 VEGFBP49765 207 aa11.85□□□□□ -0.51
CASP4-210ENST00000531546 ZBTB3Q9H5J0 574 aa11.85□□□□□ -0.51
CASP4-210ENST00000531546 PURBQ96QR8 312 aaKnown RBP11.83□□□□□ -0.52
CASP4-210ENST00000531546 ZC3H15Q8WU90 426 aaKnown RBP11.82□□□□□ -0.52
CASP4-210ENST00000531546 CDK15Q96Q40 435 aa11.82□□□□□ -0.52
CASP4-210ENST00000531546 CFAP99D6REC4 459 aa11.81□□□□□ -0.52
CASP4-210ENST00000531546 F12P00748 615 aaPredicted RBP11.81□□□□□ -0.52
CASP4-210ENST00000531546 PRPF38BQ5VTL8 546 aaKnown RBP11.81□□□□□ -0.52
CASP4-210ENST00000531546 SPTLC1O15269 473 aa11.8□□□□□ -0.52
CASP4-210ENST00000531546 ERBB4Q15303 1308 aa11.8□□□□□ -0.52
CASP4-210ENST00000531546 HRCP23327 699 aa11.79□□□□□ -0.52
CASP4-210ENST00000531546 NR5A1Q13285 461 aa11.79□□□□□ -0.52
CASP4-210ENST00000531546 ARID5BQ14865 1188 aa11.79□□□□□ -0.52
CASP4-210ENST00000531546 PARP9Q8IXQ6 854 aa11.79□□□□□ -0.52
CASP4-210ENST00000531546 MAP10Q9P2G4 905 aa11.79□□□□□ -0.52
CASP4-210ENST00000531546 PCDHB15Q9Y5E8 787 aa11.79□□□□□ -0.52
CASP4-210ENST00000531546 AGERQ15109 404 aa11.78□□□□□ -0.52
CASP4-210ENST00000531546 FOXJ1Q92949 421 aa11.78□□□□□ -0.52
CASP4-210ENST00000531546 KLF16Q9BXK1 252 aaPredicted RBP11.78□□□□□ -0.52
CASP4-210ENST00000531546 ZIC2O95409 532 aaPredicted RBP11.77□□□□□ -0.53
CASP4-210ENST00000531546 LORP23490 312 aaPredicted RBP11.77□□□□□ -0.53
CASP4-210ENST00000531546 BPHLQ86WA6 291 aaPredicted RBP11.77□□□□□ -0.53
CASP4-210ENST00000531546 RIC3Q7Z5B4 369 aa11.76□□□□□ -0.53
CASP4-210ENST00000531546 VSIG8P0DPA2 414 aa11.75□□□□□ -0.53
CASP4-210ENST00000531546 UPP2O95045 317 aa11.74□□□□□ -0.53
CASP4-210ENST00000531546 ARMC2Q8NEN0 867 aa11.74□□□□□ -0.53
CASP4-210ENST00000531546 MAN1A2O60476 641 aa11.73□□□□□ -0.53
CASP4-210ENST00000531546 ITPKCQ96DU7 683 aa11.73□□□□□ -0.53
CASP4-210ENST00000531546 ZFAND3Q9H8U3 227 aa11.73□□□□□ -0.53
CASP4-210ENST00000531546 SOBPA7XYQ1 873 aa11.72□□□□□ -0.53
CASP4-210ENST00000531546 TRIM66O15016 1216 aa11.72□□□□□ -0.53
CASP4-210ENST00000531546 CABLES1Q8TDN4 633 aa11.72□□□□□ -0.53
CASP4-210ENST00000531546 NR3C2P08235 984 aa11.71□□□□□ -0.53
CASP4-210ENST00000531546 CSPP1Q1MSJ5 1256 aa11.71□□□□□ -0.53
CASP4-210ENST00000531546 C6orf118Q5T5N4 469 aa11.71□□□□□ -0.53
CASP4-210ENST00000531546 NBPF14Q5TI25 921 aa11.71□□□□□ -0.53
CASP4-210ENST00000531546 TSC1Q92574 1164 aa11.71□□□□□ -0.53
CASP4-210ENST00000531546 C4orf48Q5BLP8 95 aa11.7□□□□□ -0.54
CASP4-210ENST00000531546 LINC00528Q8N1L1 170 aa11.7□□□□□ -0.54
CASP4-210ENST00000531546 AK7Q96M32 723 aa11.7□□□□□ -0.54
CASP4-210ENST00000531546 BMP2P12643 396 aa11.69□□□□□ -0.54
CASP4-210ENST00000531546 TUSC1Q2TAM9 212 aa11.69□□□□□ -0.54
CASP4-210ENST00000531546 NUTM2BA6NNL0 878 aaPredicted RBP11.68□□□□□ -0.54
CASP4-210ENST00000531546 NUTM2EB1AL46 878 aaPredicted RBP11.68□□□□□ -0.54
CASP4-210ENST00000531546 PER1O15534 1290 aaPredicted RBP11.68□□□□□ -0.54
CASP4-210ENST00000531546 GRM5P41594 1212 aa11.68□□□□□ -0.54
CASP4-210ENST00000531546 NUTM2DQ5VT03 806 aaPredicted RBP11.68□□□□□ -0.54
CASP4-210ENST00000531546 NUTM2AQ8IVF1 878 aaPredicted RBP11.68□□□□□ -0.54
CASP4-210ENST00000531546 MEIOBQ8N635 442 aa11.68□□□□□ -0.54
CASP4-210ENST00000531546 MAP4K5Q9Y4K4 846 aa11.68□□□□□ -0.54
CASP4-210ENST00000531546 FSHRP23945 695 aa11.67□□□□□ -0.54
CASP4-210ENST00000531546 HELBQ8NG08 1087 aaPredicted RBP11.67□□□□□ -0.54
CASP4-210ENST00000531546 C1QTNF2Q9BXJ5 285 aa11.67□□□□□ -0.54
CASP4-210ENST00000531546 SH3RF1Q7Z6J0 888 aa11.66□□□□□ -0.54
CASP4-210ENST00000531546 MYSM1Q5VVJ2 828 aa11.65□□□□□ -0.54
CASP4-210ENST00000531546 VASH1Q7L8A9 365 aaPredicted RBP11.65□□□□□ -0.54
CASP4-210ENST00000531546 TRMT44Q8IYL2 757 aaKnown RBP11.64□□□□□ -0.55
CASP4-210ENST00000531546 LIMD1Q9UGP4 676 aa11.64□□□□□ -0.55
CASP4-210ENST00000531546 LILRB3O75022 631 aa11.63□□□□□ -0.55
CASP4-210ENST00000531546 PPFIA3O75145 1194 aa11.63□□□□□ -0.55
CASP4-210ENST00000531546 QPCTQ16769 361 aa11.63□□□□□ -0.55
CASP4-210ENST00000531546 GPKOWQ92917 476 aaPredicted RBP eCLIP11.63□□□□□ -0.55
CASP4-210ENST00000531546 TSEN34Q9BSV6 310 aaKnown RBP11.63□□□□□ -0.55
CASP4-210ENST00000531546 EMILIN1Q9Y6C2 1016 aa11.63□□□□□ -0.55
CASP4-210ENST00000531546 NISCHQ9Y2I1 1504 aa11.63□□□□□ -0.55
CASP4-210ENST00000531546 SOS2Q07890 1332 aaPredicted RBP11.62□□□□□ -0.55
CASP4-210ENST00000531546 SH3BP5LQ7L8J4 393 aa11.62□□□□□ -0.55
CASP4-210ENST00000531546 MAGEB6P1A0A0J9YX57 407 aa11.61□□□□□ -0.55
CASP4-210ENST00000531546 CCDC116Q8IYX3 515 aa11.61□□□□□ -0.55
CASP4-210ENST00000531546 DNMT3LQ9UJW3 386 aa11.6□□□□□ -0.55
CASP4-210ENST00000531546 PDE4DQ08499 809 aa11.59□□□□□ -0.55
CASP4-210ENST00000531546 CLK2P49760 499 aaKnown RBP11.58□□□□□ -0.56
CASP4-210ENST00000531546 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.58□□□□□ -0.56
CASP4-210ENST00000531546 CARD14Q9BXL6 1004 aa11.56□□□□□ -0.56
CASP4-210ENST00000531546 PGPEP1Q9NXJ5 209 aa11.56□□□□□ -0.56
CASP4-210ENST00000531546 TTLL8A6PVC2 850 aa11.55□□□□□ -0.56
CASP4-210ENST00000531546 RTL5Q5HYW3 569 aaPredicted RBP11.54□□□□□ -0.56
CASP4-210ENST00000531546 RSPH6AQ9H0K4 717 aa11.54□□□□□ -0.56
CASP4-210ENST00000531546 CDV3Q9UKY7 258 aaKnown RBP11.54□□□□□ -0.56
CASP4-210ENST00000531546 ERFEQ4G0M1 354 aa11.53□□□□□ -0.56
CASP4-210ENST00000531546 KCNMA1Q12791 1236 aa11.51□□□□□ -0.57
CASP4-210ENST00000531546 PPP1R26Q5T8A7 1209 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms