RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 UPF1Q92900 1129 aaKnown RBP eCLIP15.56■□□□□ 0.08
CAPN1-221ENST00000531068 USP32Q8NFA0 1604 aa15.55■□□□□ 0.08
CAPN1-221ENST00000531068 BRD4O60885 1362 aaPredicted RBP15.55■□□□□ 0.08
CAPN1-221ENST00000531068 SLC24A1O60721 1099 aa15.55■□□□□ 0.08
CAPN1-221ENST00000531068 ZNF692Q9BU19 519 aaPredicted RBP15.55■□□□□ 0.08
CAPN1-221ENST00000531068 PPIP5K1Q6PFW1 1433 aa15.54■□□□□ 0.08
CAPN1-221ENST00000531068 NLRP13Q86W25 1043 aa15.54■□□□□ 0.08
CAPN1-221ENST00000531068 PRDM11Q9NQV5 511 aa15.54■□□□□ 0.08
CAPN1-221ENST00000531068 CCDC9Q9Y3X0 531 aaKnown RBP15.54■□□□□ 0.08
CAPN1-221ENST00000531068 ARHGEF28Q8N1W1 1705 aaKnown RBP15.54■□□□□ 0.08
CAPN1-221ENST00000531068 SLIT2O94813 1529 aa15.53■□□□□ 0.08
CAPN1-221ENST00000531068 BTG4Q9NY30 223 aa15.53■□□□□ 0.08
CAPN1-221ENST00000531068 TIMELESSQ9UNS1 1208 aa15.53■□□□□ 0.08
CAPN1-221ENST00000531068 RGS12O14924 1447 aa15.52■□□□□ 0.08
CAPN1-221ENST00000531068 NUTM2GQ5VZR2 741 aa15.52■□□□□ 0.08
CAPN1-221ENST00000531068 ATAD2Q6PL18 1390 aa15.5■□□□□ 0.07
CAPN1-221ENST00000531068 ONECUT3O60422 494 aaPredicted RBP15.5■□□□□ 0.07
CAPN1-221ENST00000531068 SBNO2Q9Y2G9 1366 aa15.49■□□□□ 0.07
CAPN1-221ENST00000531068 NLRP6P59044 892 aa15.49■□□□□ 0.07
CAPN1-221ENST00000531068 ZC3H6P61129 1189 aaKnown RBP15.49■□□□□ 0.07
CAPN1-221ENST00000531068 PUS7Q96PZ0 661 aaKnown RBP15.49■□□□□ 0.07
CAPN1-221ENST00000531068 SEPT12Q8IYM1 358 aa15.48■□□□□ 0.07
CAPN1-221ENST00000531068 RGPD8O14715 1765 aaPredicted RBP15.48■□□□□ 0.07
CAPN1-221ENST00000531068 RALGAPBQ86X10 1494 aa15.47■□□□□ 0.07
CAPN1-221ENST00000531068 GCP02774 474 aa15.47■□□□□ 0.07
CAPN1-221ENST00000531068 EVA1CP58658 441 aa15.47■□□□□ 0.07
CAPN1-221ENST00000531068 CCDC125Q86Z20 511 aa15.47■□□□□ 0.07
CAPN1-221ENST00000531068 KIAA0232Q92628 1395 aa15.47■□□□□ 0.07
CAPN1-221ENST00000531068 TRPM1Q7Z4N2 1603 aa15.46■□□□□ 0.07
CAPN1-221ENST00000531068 USP19O94966 1318 aa15.45■□□□□ 0.06
CAPN1-221ENST00000531068 USP6P35125 1406 aa15.45■□□□□ 0.06
CAPN1-221ENST00000531068 ST20-MTHFSA0A0A6YYL1 179 aa15.45■□□□□ 0.06
CAPN1-221ENST00000531068 CHRNA2Q15822 529 aa15.45■□□□□ 0.06
CAPN1-221ENST00000531068 TMC1Q8TDI8 760 aa15.45■□□□□ 0.06
CAPN1-221ENST00000531068 TTC21AQ8NDW8 1320 aa15.44■□□□□ 0.06
CAPN1-221ENST00000531068 A0A0G2JS52 829 aa15.44■□□□□ 0.06
CAPN1-221ENST00000531068 MYT1Q01538 1121 aa15.44■□□□□ 0.06
CAPN1-221ENST00000531068 HDGFL2Q7Z4V5 671 aaPredicted RBP15.44■□□□□ 0.06
CAPN1-221ENST00000531068 STRN4Q9NRL3 753 aa15.44■□□□□ 0.06
CAPN1-221ENST00000531068 SPATA31A5Q5VU36 1347 aa15.43■□□□□ 0.06
CAPN1-221ENST00000531068 TTC21BQ7Z4L5 1316 aa15.43■□□□□ 0.06
CAPN1-221ENST00000531068 SPATA31A7Q8IWB4 1347 aa15.43■□□□□ 0.06
CAPN1-221ENST00000531068 TRPM3Q9HCF6 1732 aaPredicted RBP15.43■□□□□ 0.06
CAPN1-221ENST00000531068 FAM98CQ17RN3 349 aaKnown RBP15.43■□□□□ 0.06
CAPN1-221ENST00000531068 KRT27Q7Z3Y8 459 aa15.43■□□□□ 0.06
CAPN1-221ENST00000531068 KCNH5Q8NCM2 988 aa15.43■□□□□ 0.06
CAPN1-221ENST00000531068 TERF2IPQ9NYB0 399 aa15.43■□□□□ 0.06
CAPN1-221ENST00000531068 CPDO75976 1380 aa15.43■□□□□ 0.06
CAPN1-221ENST00000531068 ITSN1Q15811 1721 aa15.42■□□□□ 0.06
CAPN1-221ENST00000531068 KTN1Q86UP2 1357 aaKnown RBP15.41■□□□□ 0.06
CAPN1-221ENST00000531068 TESK2Q96S53 571 aa15.41■□□□□ 0.06
CAPN1-221ENST00000531068 SLC12A5Q9H2X9 1139 aa15.41■□□□□ 0.06
CAPN1-221ENST00000531068 CPSF1Q10570 1443 aaKnown RBP15.41■□□□□ 0.06
CAPN1-221ENST00000531068 SSH2Q76I76 1423 aa15.41■□□□□ 0.06
CAPN1-221ENST00000531068 ALS2Q96Q42 1657 aa15.41■□□□□ 0.06
CAPN1-221ENST00000531068 SPATA31A1Q5TZJ5 1347 aa15.4■□□□□ 0.06
CAPN1-221ENST00000531068 QRICH2Q9H0J4 1663 aa15.39■□□□□ 0.05
CAPN1-221ENST00000531068 TMF1P82094 1093 aa15.39■□□□□ 0.05
CAPN1-221ENST00000531068 TOPAZ1Q8N9V7 1692 aa15.38■□□□□ 0.05
CAPN1-221ENST00000531068 ZBTB7CA1YPR0 619 aa15.38■□□□□ 0.05
CAPN1-221ENST00000531068 SF3B2Q13435 895 aaKnown RBP15.38■□□□□ 0.05
CAPN1-221ENST00000531068 CDCA8Q53HL2 280 aa15.38■□□□□ 0.05
CAPN1-221ENST00000531068 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.38■□□□□ 0.05
CAPN1-221ENST00000531068 BARGINQ6ZT62 677 aa15.37■□□□□ 0.05
CAPN1-221ENST00000531068 THRAP3Q9Y2W1 955 aaKnown RBP15.37■□□□□ 0.05
CAPN1-221ENST00000531068 MARF1Q9Y4F3 1742 aaKnown RBP15.37■□□□□ 0.05
CAPN1-221ENST00000531068 AATKQ6ZMQ8 1374 aa15.36■□□□□ 0.05
CAPN1-221ENST00000531068 NINLQ9Y2I6 1382 aa15.36■□□□□ 0.05
CAPN1-221ENST00000531068 GLI3P10071 1580 aa15.36■□□□□ 0.05
CAPN1-221ENST00000531068 LARP1Q6PKG0 1096 aaKnown RBP15.36■□□□□ 0.05
CAPN1-221ENST00000531068 ARHGEF25Q86VW2 580 aa15.36■□□□□ 0.05
CAPN1-221ENST00000531068 TCP11L2Q8N4U5 519 aa15.36■□□□□ 0.05
CAPN1-221ENST00000531068 USP35Q9P2H5 1018 aa15.36■□□□□ 0.05
CAPN1-221ENST00000531068 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.36■□□□□ 0.05
CAPN1-221ENST00000531068 COL14A1Q05707 1796 aaKnown RBP15.36■□□□□ 0.05
CAPN1-221ENST00000531068 USP47Q96K76 1375 aa15.35■□□□□ 0.05
CAPN1-221ENST00000531068 NWD2Q9ULI1 1742 aa15.34■□□□□ 0.05
CAPN1-221ENST00000531068 SOX12O15370 315 aa15.33■□□□□ 0.04
CAPN1-221ENST00000531068 PDE3BQ13370 1112 aa15.33■□□□□ 0.04
CAPN1-221ENST00000531068 NME9Q86XW9 330 aa15.33■□□□□ 0.04
CAPN1-221ENST00000531068 USP31Q70CQ4 1352 aa15.33■□□□□ 0.04
CAPN1-221ENST00000531068 BLMP54132 1417 aaPredicted RBP15.33■□□□□ 0.04
CAPN1-221ENST00000531068 TOM1L2Q6ZVM7 507 aa15.32■□□□□ 0.04
CAPN1-221ENST00000531068 FAM196AQ6ZSG2 479 aa15.31■□□□□ 0.04
CAPN1-221ENST00000531068 AXIN2Q9Y2T1 843 aa15.31■□□□□ 0.04
CAPN1-221ENST00000531068 EDC4Q6P2E9 1401 aaKnown RBP15.31■□□□□ 0.04
CAPN1-221ENST00000531068 ABCA3Q99758 1704 aa15.31■□□□□ 0.04
CAPN1-221ENST00000531068 CSB-PGBD3P0DP91 1061 aa15.3■□□□□ 0.04
CAPN1-221ENST00000531068 PLCH1Q4KWH8 1693 aa15.3■□□□□ 0.04
CAPN1-221ENST00000531068 ZRANB1Q9UGI0 708 aa15.3■□□□□ 0.04
CAPN1-221ENST00000531068 CAMTA1Q9Y6Y1 1673 aa15.3■□□□□ 0.04
CAPN1-221ENST00000531068 SLIT3O75094 1523 aa15.29■□□□□ 0.04
CAPN1-221ENST00000531068 A0A1W2PP64 1363 aa15.29■□□□□ 0.04
CAPN1-221ENST00000531068 C11orf95C9JLR9 678 aaPredicted RBP15.29■□□□□ 0.04
CAPN1-221ENST00000531068 CDCA7Q9BWT1 371 aaPredicted RBP15.29■□□□□ 0.04
CAPN1-221ENST00000531068 NRKQ7Z2Y5 1582 aa15.28■□□□□ 0.04
CAPN1-221ENST00000531068 CD163L1Q9NR16 1453 aa15.28■□□□□ 0.04
CAPN1-221ENST00000531068 CRB1P82279 1406 aa15.28■□□□□ 0.04
CAPN1-221ENST00000531068 WDR17Q8IZU2 1322 aa15.28■□□□□ 0.04
CAPN1-221ENST00000531068 BAG6P46379 1132 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms