RNA–Protein interactions for RNA: ENST00000530448.5

LETM2-215, Transcript of leucine zipper and EF-hand containing transmembrane protein 2, human

TSL 2

Gene LETM2, Length 650 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETM2-215	ENST00000530448	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	14.01	□□□□□ -0.17
LETM2-215	ENST00000530448	MST1R	Q04912	1400 aa		14	□□□□□ -0.17
LETM2-215	ENST00000530448	PNPLA6	Q8IY17	1366 aa		14	□□□□□ -0.17
LETM2-215	ENST00000530448	PIK3R4	Q99570	1358 aa		14	□□□□□ -0.17
LETM2-215	ENST00000530448	LOC105371045	A0A1W2PR82	267 aa		13.99	□□□□□ -0.17
LETM2-215	ENST00000530448	ADAMTS2	O95450	1211 aa		13.99	□□□□□ -0.17
LETM2-215	ENST00000530448	UNC13B	O14795	1591 aa		13.99	□□□□□ -0.17
LETM2-215	ENST00000530448	DCC	P43146	1447 aa		13.98	□□□□□ -0.17
LETM2-215	ENST00000530448	ANKRD50	Q9ULJ7	1429 aa		13.98	□□□□□ -0.17
LETM2-215	ENST00000530448		E9PCH4	1651 aa		13.98	□□□□□ -0.17
LETM2-215	ENST00000530448	SETBP1	Q9Y6X0	1596 aa		13.98	□□□□□ -0.17
LETM2-215	ENST00000530448	LRRC59	Q96AG4	307 aa	Known RBP	13.98	□□□□□ -0.17
LETM2-215	ENST00000530448	ADGRL2	O95490	1459 aa		13.98	□□□□□ -0.17
LETM2-215	ENST00000530448	XRN1	Q8IZH2	1706 aa	Known RBP	13.98	□□□□□ -0.17
LETM2-215	ENST00000530448	ATAD2	Q6PL18	1390 aa		13.97	□□□□□ -0.17
LETM2-215	ENST00000530448	NGLY1	Q96IV0	654 aa		13.97	□□□□□ -0.17
LETM2-215	ENST00000530448	CABP2	Q9NPB3	220 aa		13.96	□□□□□ -0.17
LETM2-215	ENST00000530448	NRXN3	Q9Y4C0	1643 aa		13.96	□□□□□ -0.17
LETM2-215	ENST00000530448	EMP3	P54852	163 aa		13.94	□□□□□ -0.18
LETM2-215	ENST00000530448	SPNS2	Q8IVW8	549 aa		13.94	□□□□□ -0.18
LETM2-215	ENST00000530448	NALCN	Q8IZF0	1738 aa		13.94	□□□□□ -0.18
LETM2-215	ENST00000530448	FAM50A	Q14320	339 aa	Known RBP	13.93	□□□□□ -0.18
LETM2-215	ENST00000530448	DPY19L2	Q6NUT2	758 aa		13.93	□□□□□ -0.18
LETM2-215	ENST00000530448	USP21	Q9UK80	565 aa		13.93	□□□□□ -0.18
LETM2-215	ENST00000530448	ADGRL3	Q9HAR2	1447 aa		13.92	□□□□□ -0.18
LETM2-215	ENST00000530448		G3V3G9	751 aa		13.92	□□□□□ -0.18
LETM2-215	ENST00000530448	MMRN1	Q13201	1228 aa		13.92	□□□□□ -0.18
LETM2-215	ENST00000530448	EP400	Q96L91	3159 aa		13.92	□□□□□ -0.18
LETM2-215	ENST00000530448	MET	P08581	1390 aa		13.92	□□□□□ -0.18
LETM2-215	ENST00000530448	TRPC5	Q9UL62	973 aa	Predicted RBP	13.9	□□□□□ -0.18
LETM2-215	ENST00000530448	BOLA1	Q9Y3E2	137 aa		13.9	□□□□□ -0.18
LETM2-215	ENST00000530448	C1orf167	Q5SNV9	1468 aa		13.89	□□□□□ -0.19
LETM2-215	ENST00000530448	ATRN	O75882	1429 aa		13.89	□□□□□ -0.19
LETM2-215	ENST00000530448	IQGAP3	Q86VI3	1631 aa		13.88	□□□□□ -0.19
LETM2-215	ENST00000530448	LAMC1	P11047	1609 aa		13.86	□□□□□ -0.19
LETM2-215	ENST00000530448	ZNF326	Q5BKZ1	582 aa	Known RBP	13.86	□□□□□ -0.19
LETM2-215	ENST00000530448	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.86	□□□□□ -0.19
LETM2-215	ENST00000530448	ORAI2	Q96SN7	254 aa		13.86	□□□□□ -0.19
LETM2-215	ENST00000530448	PTCH1	Q13635	1447 aa		13.85	□□□□□ -0.19
LETM2-215	ENST00000530448	SOS2	Q07890	1332 aa	Predicted RBP	13.85	□□□□□ -0.19
LETM2-215	ENST00000530448	HS3ST6	Q96QI5	342 aa		13.84	□□□□□ -0.19
LETM2-215	ENST00000530448	NUP155	O75694	1391 aa		13.83	□□□□□ -0.19
LETM2-215	ENST00000530448	FAM205C	A6NFA0	338 aa		13.83	□□□□□ -0.2
LETM2-215	ENST00000530448	SPHKAP	Q2M3C7	1700 aa		13.83	□□□□□ -0.2
LETM2-215	ENST00000530448	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.82	□□□□□ -0.2
LETM2-215	ENST00000530448	BCL9L	Q86UU0	1499 aa		13.82	□□□□□ -0.2
LETM2-215	ENST00000530448	MARF1	Q9Y4F3	1742 aa	Known RBP	13.81	□□□□□ -0.2
LETM2-215	ENST00000530448	MYOM2	P54296	1465 aa		13.81	□□□□□ -0.2
LETM2-215	ENST00000530448	DEFB132	Q7Z7B7	95 aa		13.81	□□□□□ -0.2
LETM2-215	ENST00000530448	CCDC125	Q86Z20	511 aa		13.81	□□□□□ -0.2
LETM2-215	ENST00000530448	NEXMIF	Q5QGS0	1516 aa		13.8	□□□□□ -0.2
LETM2-215	ENST00000530448	XPC	Q01831	940 aa	Predicted RBP	13.8	□□□□□ -0.2
LETM2-215	ENST00000530448	ROBO2	Q9HCK4	1378 aa		13.8	□□□□□ -0.2
LETM2-215	ENST00000530448	BRWD3	Q6RI45	1802 aa		13.79	□□□□□ -0.2
LETM2-215	ENST00000530448	GJD4	Q96KN9	370 aa	Predicted RBP	13.79	□□□□□ -0.2
LETM2-215	ENST00000530448	POTEB3	A0JP26	581 aa		13.78	□□□□□ -0.2
LETM2-215	ENST00000530448	POTEB	Q6S5H4	581 aa		13.78	□□□□□ -0.2
LETM2-215	ENST00000530448	BLM	P54132	1417 aa	Predicted RBP	13.78	□□□□□ -0.2
LETM2-215	ENST00000530448	GLI3	P10071	1580 aa		13.78	□□□□□ -0.2
LETM2-215	ENST00000530448	CLTCL1	P53675	1640 aa		13.78	□□□□□ -0.2
LETM2-215	ENST00000530448	LRP5	O75197	1615 aa		13.76	□□□□□ -0.21
LETM2-215	ENST00000530448	RALGAPB	Q86X10	1494 aa		13.76	□□□□□ -0.21
LETM2-215	ENST00000530448	PXDN	Q92626	1479 aa		13.76	□□□□□ -0.21
LETM2-215	ENST00000530448	HOXB3	P14651	431 aa	Predicted RBP	13.76	□□□□□ -0.21
LETM2-215	ENST00000530448	EFCAB3	Q8N7B9	438 aa		13.76	□□□□□ -0.21
LETM2-215	ENST00000530448	KRTAP3-3	Q9BYR6	98 aa		13.76	□□□□□ -0.21
LETM2-215	ENST00000530448	KRTAP3-2	Q9BYR7	98 aa		13.76	□□□□□ -0.21
LETM2-215	ENST00000530448	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.76	□□□□□ -0.21
LETM2-215	ENST00000530448	ROCK1	Q13464	1354 aa		13.75	□□□□□ -0.21
LETM2-215	ENST00000530448	ITGAE	P38570	1179 aa		13.75	□□□□□ -0.21
LETM2-215	ENST00000530448	ESCO1	Q5FWF5	840 aa		13.75	□□□□□ -0.21
LETM2-215	ENST00000530448	ZNF710	Q8N1W2	664 aa		13.74	□□□□□ -0.21
LETM2-215	ENST00000530448	KIF1B	O60333	1816 aa		13.74	□□□□□ -0.21
LETM2-215	ENST00000530448	NPHP3	Q7Z494	1330 aa		13.73	□□□□□ -0.21
LETM2-215	ENST00000530448	PSD	A5PKW4	1024 aa	Predicted RBP	13.73	□□□□□ -0.21
LETM2-215	ENST00000530448	FOXO3	O43524	673 aa		13.73	□□□□□ -0.21
LETM2-215	ENST00000530448	DOK7	Q18PE1	504 aa		13.72	□□□□□ -0.21
LETM2-215	ENST00000530448	UNC5CL	Q8IV45	518 aa		13.72	□□□□□ -0.21
LETM2-215	ENST00000530448	SLIT2	O94813	1529 aa		13.71	□□□□□ -0.21
LETM2-215	ENST00000530448	NUTM2F	A1L443	756 aa		13.71	□□□□□ -0.21
LETM2-215	ENST00000530448	SF3B2	Q13435	895 aa	Known RBP	13.71	□□□□□ -0.21
LETM2-215	ENST00000530448	CDC42BPG	Q6DT37	1551 aa		13.71	□□□□□ -0.22
LETM2-215	ENST00000530448	HOXB1	P14653	301 aa	Predicted RBP	13.7	□□□□□ -0.22
LETM2-215	ENST00000530448	SEPT12	Q8IYM1	358 aa		13.7	□□□□□ -0.22
LETM2-215	ENST00000530448	HFM1	A2PYH4	1435 aa		13.7	□□□□□ -0.22
LETM2-215	ENST00000530448	USP32	Q8NFA0	1604 aa		13.68	□□□□□ -0.22
LETM2-215	ENST00000530448	PRAG1	Q86YV5	1406 aa		13.68	□□□□□ -0.22
LETM2-215	ENST00000530448	NAIP	Q13075	1403 aa		13.67	□□□□□ -0.22
LETM2-215	ENST00000530448	HRC	P23327	699 aa		13.67	□□□□□ -0.22
LETM2-215	ENST00000530448	PLCH1	Q4KWH8	1693 aa		13.66	□□□□□ -0.22
LETM2-215	ENST00000530448	VGF	O15240	615 aa	Predicted RBP	13.66	□□□□□ -0.22
LETM2-215	ENST00000530448	CCDC9	Q9Y3X0	531 aa	Known RBP	13.66	□□□□□ -0.22
LETM2-215	ENST00000530448	RIOK3	O14730	519 aa	Known RBP	13.65	□□□□□ -0.22
LETM2-215	ENST00000530448	RIMBP2	O15034	1052 aa		13.65	□□□□□ -0.22
LETM2-215	ENST00000530448	KRT27	Q7Z3Y8	459 aa		13.65	□□□□□ -0.22
LETM2-215	ENST00000530448	CABLES1	Q8TDN4	633 aa		13.65	□□□□□ -0.22
LETM2-215	ENST00000530448	PPL	O60437	1756 aa		13.65	□□□□□ -0.22
LETM2-215	ENST00000530448	SPATA31A3	Q5VYP0	1347 aa		13.64	□□□□□ -0.23
LETM2-215	ENST00000530448	LRPPRC	P42704	1394 aa	Known RBP	13.64	□□□□□ -0.23
LETM2-215	ENST00000530448		A0A0G2JS52	829 aa		13.64	□□□□□ -0.23

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