RNA–Protein interactions for RNA: ENST00000530396.1

NCAPD3-208, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS ALT2 TSL 3

Gene NCAPD3, Length 1,521 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-208ENST00000530396 USP32Q8NFA0 1604 aa13.32□□□□□ -0.28
NCAPD3-208ENST00000530396 KRT28Q7Z3Y7 464 aa13.31□□□□□ -0.28
NCAPD3-208ENST00000530396 C14orf93Q9H972 538 aaKnown RBP13.31□□□□□ -0.28
NCAPD3-208ENST00000530396 CARD11Q9BXL7 1154 aa13.3□□□□□ -0.28
NCAPD3-208ENST00000530396 ZRANB1Q9UGI0 708 aa13.3□□□□□ -0.28
NCAPD3-208ENST00000530396 TNS3Q68CZ2 1445 aa13.3□□□□□ -0.28
NCAPD3-208ENST00000530396 GLI3P10071 1580 aa13.3□□□□□ -0.28
NCAPD3-208ENST00000530396 PSME1Q06323 249 aa13.29□□□□□ -0.28
NCAPD3-208ENST00000530396 CCDC184Q52MB2 194 aa13.29□□□□□ -0.28
NCAPD3-208ENST00000530396 PHF8Q9UPP1 1060 aa13.29□□□□□ -0.28
NCAPD3-208ENST00000530396 RGPD8O14715 1765 aaPredicted RBP13.28□□□□□ -0.28
NCAPD3-208ENST00000530396 SBNO1A3KN83 1393 aa13.28□□□□□ -0.28
NCAPD3-208ENST00000530396 DLC1Q96QB1 1528 aa13.27□□□□□ -0.28
NCAPD3-208ENST00000530396 HAP1P54257 671 aaPredicted RBP13.27□□□□□ -0.29
NCAPD3-208ENST00000530396 CFAP70Q5T0N1 1121 aa13.27□□□□□ -0.29
NCAPD3-208ENST00000530396 STAC3Q96MF2 364 aa13.27□□□□□ -0.29
NCAPD3-208ENST00000530396 NWD2Q9ULI1 1742 aa13.27□□□□□ -0.29
NCAPD3-208ENST00000530396 ARHGEF10O15013 1369 aa13.26□□□□□ -0.29
NCAPD3-208ENST00000530396 BLMP54132 1417 aaPredicted RBP13.26□□□□□ -0.29
NCAPD3-208ENST00000530396 ANKARQ7Z5J8 1434 aa13.26□□□□□ -0.29
NCAPD3-208ENST00000530396 DCAF11Q8TEB1 546 aa13.26□□□□□ -0.29
NCAPD3-208ENST00000530396 PRAM1Q96QH2 718 aa13.26□□□□□ -0.29
NCAPD3-208ENST00000530396 BRD4O60885 1362 aaPredicted RBP13.26□□□□□ -0.29
NCAPD3-208ENST00000530396 PLCH1Q4KWH8 1693 aa13.26□□□□□ -0.29
NCAPD3-208ENST00000530396 SMG6Q86US8 1419 aaKnown RBP13.26□□□□□ -0.29
NCAPD3-208ENST00000530396 ABCA3Q99758 1704 aa13.26□□□□□ -0.29
NCAPD3-208ENST00000530396 ADGRB2O60241 1585 aa13.25□□□□□ -0.29
NCAPD3-208ENST00000530396 RALBP1Q15311 655 aa13.25□□□□□ -0.29
NCAPD3-208ENST00000530396 VPS72Q15906 364 aa13.25□□□□□ -0.29
NCAPD3-208ENST00000530396 BRWD3Q6RI45 1802 aa13.25□□□□□ -0.29
NCAPD3-208ENST00000530396 NCBP3Q53F19 620 aaKnown RBP13.24□□□□□ -0.29
NCAPD3-208ENST00000530396 INSRP06213 1382 aa13.24□□□□□ -0.29
NCAPD3-208ENST00000530396 KIAA1210Q9ULL0 1709 aa13.24□□□□□ -0.29
NCAPD3-208ENST00000530396 DCAF8L1A6NGE4 600 aa13.23□□□□□ -0.29
NCAPD3-208ENST00000530396 SAFB2Q14151 953 aaKnown RBP eCLIP13.23□□□□□ -0.29
NCAPD3-208ENST00000530396 CABLES1Q8TDN4 633 aa13.23□□□□□ -0.29
NCAPD3-208ENST00000530396 POGKQ9P215 609 aa13.23□□□□□ -0.29
NCAPD3-208ENST00000530396 ST20-MTHFSA0A0A6YYL1 179 aa13.23□□□□□ -0.29
NCAPD3-208ENST00000530396 ONECUT3O60422 494 aaPredicted RBP13.23□□□□□ -0.29
NCAPD3-208ENST00000530396 SEPT12Q8IYM1 358 aa13.23□□□□□ -0.29
NCAPD3-208ENST00000530396 FAM9BQ8IZU0 186 aa13.23□□□□□ -0.29
NCAPD3-208ENST00000530396 ADGRB1O14514 1584 aa13.23□□□□□ -0.29
NCAPD3-208ENST00000530396 EIF3AQ14152 1382 aaKnown RBP13.22□□□□□ -0.29
NCAPD3-208ENST00000530396 LMOD2Q6P5Q4 547 aa13.22□□□□□ -0.29
NCAPD3-208ENST00000530396 PPP4R2Q9NY27 417 aa13.22□□□□□ -0.29
NCAPD3-208ENST00000530396 PMFBP1Q8TBY8 1022 aa13.21□□□□□ -0.29
NCAPD3-208ENST00000530396 PNISRQ8TF01 805 aaKnown RBP13.21□□□□□ -0.29
NCAPD3-208ENST00000530396 TRPM3Q9HCF6 1732 aaPredicted RBP13.21□□□□□ -0.3
NCAPD3-208ENST00000530396 MYBBP1AQ9BQG0 1328 aaKnown RBP13.2□□□□□ -0.3
NCAPD3-208ENST00000530396 SF3B2Q13435 895 aaKnown RBP13.2□□□□□ -0.3
NCAPD3-208ENST00000530396 KDM2AQ9Y2K7 1162 aa13.2□□□□□ -0.3
NCAPD3-208ENST00000530396 CCDC9Q9Y3X0 531 aaKnown RBP13.2□□□□□ -0.3
NCAPD3-208ENST00000530396 RNF123Q5XPI4 1314 aa13.19□□□□□ -0.3
NCAPD3-208ENST00000530396 NRAPQ86VF7 1730 aa13.19□□□□□ -0.3
NCAPD3-208ENST00000530396 FAM83GA6ND36 823 aa13.19□□□□□ -0.3
NCAPD3-208ENST00000530396 PLEKHG5O94827 1062 aa13.19□□□□□ -0.3
NCAPD3-208ENST00000530396 TULP4Q9NRJ4 1543 aa13.19□□□□□ -0.3
NCAPD3-208ENST00000530396 PARD3Q8TEW0 1356 aa13.19□□□□□ -0.3
NCAPD3-208ENST00000530396 ALS2Q96Q42 1657 aa13.19□□□□□ -0.3
NCAPD3-208ENST00000530396 KRT27Q7Z3Y8 459 aa13.18□□□□□ -0.3
NCAPD3-208ENST00000530396 DEFB132Q7Z7B7 95 aa13.18□□□□□ -0.3
NCAPD3-208ENST00000530396 TRAK1Q9UPV9 953 aa13.18□□□□□ -0.3
NCAPD3-208ENST00000530396 COL14A1Q05707 1796 aaKnown RBP13.18□□□□□ -0.3
NCAPD3-208ENST00000530396 MINK1Q8N4C8 1332 aaPredicted RBP13.16□□□□□ -0.3
NCAPD3-208ENST00000530396 PRR36Q9H6K5 1346 aa13.16□□□□□ -0.3
NCAPD3-208ENST00000530396 WASLO00401 505 aaPredicted RBP13.16□□□□□ -0.3
NCAPD3-208ENST00000530396 NPM3O75607 178 aaKnown RBP13.16□□□□□ -0.3
NCAPD3-208ENST00000530396 TMC1Q8TDI8 760 aa13.16□□□□□ -0.3
NCAPD3-208ENST00000530396 BTG4Q9NY30 223 aa13.16□□□□□ -0.3
NCAPD3-208ENST00000530396 NUDCQ9Y266 331 aa13.16□□□□□ -0.3
NCAPD3-208ENST00000530396 TESK2Q96S53 571 aa13.15□□□□□ -0.3
NCAPD3-208ENST00000530396 CRYBG1Q9Y4K1 1723 aa13.14□□□□□ -0.31
NCAPD3-208ENST00000530396 A0A0G2JS52 829 aa13.14□□□□□ -0.31
NCAPD3-208ENST00000530396 FAM98CQ17RN3 349 aaKnown RBP13.14□□□□□ -0.31
NCAPD3-208ENST00000530396 NLRP13Q86W25 1043 aa13.14□□□□□ -0.31
NCAPD3-208ENST00000530396 PER1O15534 1290 aaPredicted RBP13.13□□□□□ -0.31
NCAPD3-208ENST00000530396 BAG6P46379 1132 aa13.13□□□□□ -0.31
NCAPD3-208ENST00000530396 NGDNQ8NEJ9 315 aaKnown RBP13.13□□□□□ -0.31
NCAPD3-208ENST00000530396 POLR3GLQ9BT43 218 aa13.13□□□□□ -0.31
NCAPD3-208ENST00000530396 ITSN1Q15811 1721 aa13.13□□□□□ -0.31
NCAPD3-208ENST00000530396 LRP5O75197 1615 aa13.13□□□□□ -0.31
NCAPD3-208ENST00000530396 NBPF1Q3BBV0 1214 aa13.13□□□□□ -0.31
NCAPD3-208ENST00000530396 ARHGEF28Q8N1W1 1705 aaKnown RBP13.13□□□□□ -0.31
NCAPD3-208ENST00000530396 SPATA31A5Q5VU36 1347 aa13.12□□□□□ -0.31
NCAPD3-208ENST00000530396 SPATA31A7Q8IWB4 1347 aa13.12□□□□□ -0.31
NCAPD3-208ENST00000530396 TMF1P82094 1093 aa13.12□□□□□ -0.31
NCAPD3-208ENST00000530396 RBM19Q9Y4C8 960 aaKnown RBP13.12□□□□□ -0.31
NCAPD3-208ENST00000530396 ATP7BP35670 1465 aa13.12□□□□□ -0.31
NCAPD3-208ENST00000530396 RGPD1P0DJD0 1748 aa13.11□□□□□ -0.31
NCAPD3-208ENST00000530396 THSD7AQ9UPZ6 1657 aa13.11□□□□□ -0.31
NCAPD3-208ENST00000530396 SLC24A1O60721 1099 aa13.11□□□□□ -0.31
NCAPD3-208ENST00000530396 PAK3O75914 559 aaPredicted RBP13.11□□□□□ -0.31
NCAPD3-208ENST00000530396 PDE3BQ13370 1112 aa13.11□□□□□ -0.31
NCAPD3-208ENST00000530396 CACNB1Q02641 598 aaPredicted RBP13.1□□□□□ -0.31
NCAPD3-208ENST00000530396 PRDM11Q9NQV5 511 aa13.1□□□□□ -0.31
NCAPD3-208ENST00000530396 NUDT16Q96DE0 195 aaKnown RBP13.09□□□□□ -0.31
NCAPD3-208ENST00000530396 PHRF1Q9P1Y6 1649 aaKnown RBP13.09□□□□□ -0.31
NCAPD3-208ENST00000530396 CDCA8Q53HL2 280 aa13.08□□□□□ -0.31
NCAPD3-208ENST00000530396 DISP2A7MBM2 1401 aa13.08□□□□□ -0.31
NCAPD3-208ENST00000530396 KIAA0232Q92628 1395 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms