RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 OTUD5Q96G74 571 aa10.83□□□□□ -0.68
CAPRIN1-208ENST00000530008 MAP10Q9P2G4 905 aa10.83□□□□□ -0.68
CAPRIN1-208ENST00000530008 USP17L3A6NCW0 530 aa10.82□□□□□ -0.68
CAPRIN1-208ENST00000530008 USP17L4A6NCW7 530 aa10.82□□□□□ -0.68
CAPRIN1-208ENST00000530008 SKIP12755 728 aa10.82□□□□□ -0.68
CAPRIN1-208ENST00000530008 JUNDP17535 347 aa10.82□□□□□ -0.68
CAPRIN1-208ENST00000530008 RBM25P49756 843 aaKnown RBP10.82□□□□□ -0.68
CAPRIN1-208ENST00000530008 EMP3P54852 163 aa10.82□□□□□ -0.68
CAPRIN1-208ENST00000530008 CCDC27Q2M243 656 aa10.82□□□□□ -0.68
CAPRIN1-208ENST00000530008 USP17L2Q6R6M4 530 aa10.82□□□□□ -0.68
CAPRIN1-208ENST00000530008 USP17L1Q7RTZ2 530 aa10.82□□□□□ -0.68
CAPRIN1-208ENST00000530008 PLEKHM2Q8IWE5 1019 aa10.82□□□□□ -0.68
CAPRIN1-208ENST00000530008 ZMIZ1Q9ULJ6 1067 aa10.82□□□□□ -0.68
CAPRIN1-208ENST00000530008 USP17L5A8MUK1 530 aa10.81□□□□□ -0.68
CAPRIN1-208ENST00000530008 FMNL1O95466 1100 aaPredicted RBP10.81□□□□□ -0.68
CAPRIN1-208ENST00000530008 PTPRNQ16849 979 aa10.81□□□□□ -0.68
CAPRIN1-208ENST00000530008 TMEM164Q5U3C3 297 aa10.81□□□□□ -0.68
CAPRIN1-208ENST00000530008 STK32AQ8WU08 396 aa10.81□□□□□ -0.68
CAPRIN1-208ENST00000530008 ZNF428Q96B54 188 aa10.81□□□□□ -0.68
CAPRIN1-208ENST00000530008 THAP11Q96EK4 314 aa10.81□□□□□ -0.68
CAPRIN1-208ENST00000530008 GNEQ9Y223 722 aaKnown RBP10.81□□□□□ -0.68
CAPRIN1-208ENST00000530008 SCUBE3Q8IX30 993 aa10.8□□□□□ -0.68
CAPRIN1-208ENST00000530008 NOVA2Q9UNW9 492 aaKnown RBP10.8□□□□□ -0.68
CAPRIN1-208ENST00000530008 PPP4CP60510 307 aa10.79□□□□□ -0.68
CAPRIN1-208ENST00000530008 FAM174AQ8TBP5 190 aa10.79□□□□□ -0.68
CAPRIN1-208ENST00000530008 NR1I2O75469 434 aa10.78□□□□□ -0.68
CAPRIN1-208ENST00000530008 CTHP32929 405 aa10.78□□□□□ -0.68
CAPRIN1-208ENST00000530008 APLP1P51693 650 aa10.78□□□□□ -0.68
CAPRIN1-208ENST00000530008 FAM205CA6NFA0 338 aa10.77□□□□□ -0.69
CAPRIN1-208ENST00000530008 ST18O60284 1047 aa10.77□□□□□ -0.69
CAPRIN1-208ENST00000530008 ADGRD1Q6QNK2 874 aa10.77□□□□□ -0.69
CAPRIN1-208ENST00000530008 DEPDC4Q8N2C3 294 aa10.77□□□□□ -0.69
CAPRIN1-208ENST00000530008 ANKK1Q8NFD2 765 aa10.77□□□□□ -0.69
CAPRIN1-208ENST00000530008 MARVELD3Q96A59 401 aa10.77□□□□□ -0.69
CAPRIN1-208ENST00000530008 GPSM3Q9Y4H4 160 aa10.77□□□□□ -0.69
CAPRIN1-208ENST00000530008 PCDHB3Q9Y5E6 796 aa10.77□□□□□ -0.69
CAPRIN1-208ENST00000530008 HPS5Q9UPZ3 1129 aa10.76□□□□□ -0.69
CAPRIN1-208ENST00000530008 SOWAHBA6NEL2 793 aa10.75□□□□□ -0.69
CAPRIN1-208ENST00000530008 FAM196BA6NMK8 535 aa10.75□□□□□ -0.69
CAPRIN1-208ENST00000530008 USP17L15C9J2P7 530 aa10.75□□□□□ -0.69
CAPRIN1-208ENST00000530008 USP17L10C9JJH3 530 aa10.75□□□□□ -0.69
CAPRIN1-208ENST00000530008 USP17L13C9JLJ4 530 aa10.75□□□□□ -0.69
CAPRIN1-208ENST00000530008 USP17L12C9JPN9 530 aa10.75□□□□□ -0.69
CAPRIN1-208ENST00000530008 USP17L11C9JVI0 530 aa10.75□□□□□ -0.69
CAPRIN1-208ENST00000530008 USP17L21D6R901 530 aa10.75□□□□□ -0.69
CAPRIN1-208ENST00000530008 USP17L18D6R9N7 530 aa10.75□□□□□ -0.69
CAPRIN1-208ENST00000530008 USP17L22D6RA61 530 aa10.75□□□□□ -0.69
CAPRIN1-208ENST00000530008 USP17L17D6RBQ6 530 aa10.75□□□□□ -0.69
CAPRIN1-208ENST00000530008 USP17L19D6RCP7 530 aa10.75□□□□□ -0.69
CAPRIN1-208ENST00000530008 USP17L20D6RJB6 530 aa10.75□□□□□ -0.69
CAPRIN1-208ENST00000530008 PTK2Q05397 1052 aa10.75□□□□□ -0.69
CAPRIN1-208ENST00000530008 USP17L24Q0WX57 530 aa10.75□□□□□ -0.69
CAPRIN1-208ENST00000530008 CEP126Q9P2H0 1117 aa10.75□□□□□ -0.69
CAPRIN1-208ENST00000530008 MKRN1Q9UHC7 482 aaKnown RBP10.75□□□□□ -0.69
CAPRIN1-208ENST00000530008 CCNYL3P0C7X3 344 aa10.74□□□□□ -0.69
CAPRIN1-208ENST00000530008 MCCD1P59942 119 aaPredicted RBP10.74□□□□□ -0.69
CAPRIN1-208ENST00000530008 SLFNL1Q499Z3 407 aa10.74□□□□□ -0.69
CAPRIN1-208ENST00000530008 PDXDC2PQ6P474 469 aa10.74□□□□□ -0.69
CAPRIN1-208ENST00000530008 ARMC2Q8NEN0 867 aa10.74□□□□□ -0.69
CAPRIN1-208ENST00000530008 ZNF592Q92610 1267 aa10.74□□□□□ -0.69
CAPRIN1-208ENST00000530008 TSR3Q9UJK0 312 aaKnown RBP10.74□□□□□ -0.69
CAPRIN1-208ENST00000530008 AMOTL2Q9Y2J4 779 aa10.74□□□□□ -0.69
CAPRIN1-208ENST00000530008 GOLGA8CPA6NN73 597 aa10.73□□□□□ -0.69
CAPRIN1-208ENST00000530008 HRO43593 1189 aa10.73□□□□□ -0.69
CAPRIN1-208ENST00000530008 MSS51Q4VC12 460 aa10.73□□□□□ -0.69
CAPRIN1-208ENST00000530008 CRTC2Q53ET0 693 aaPredicted RBP10.73□□□□□ -0.69
CAPRIN1-208ENST00000530008 PHLDB3Q6NSJ2 640 aa10.73□□□□□ -0.69
CAPRIN1-208ENST00000530008 LARP1Q6PKG0 1096 aaKnown RBP10.73□□□□□ -0.69
CAPRIN1-208ENST00000530008 TXNDC2Q86VQ3 553 aa10.73□□□□□ -0.69
CAPRIN1-208ENST00000530008 CCER1Q8TC90 406 aaPredicted RBP10.73□□□□□ -0.69
CAPRIN1-208ENST00000530008 GPKOWQ92917 476 aaPredicted RBP eCLIP10.73□□□□□ -0.69
CAPRIN1-208ENST00000530008 EVA1BQ9NVM1 165 aa10.73□□□□□ -0.69
CAPRIN1-208ENST00000530008 BCAMP50895 628 aa10.72□□□□□ -0.69
CAPRIN1-208ENST00000530008 LSM11P83369 360 aaKnown RBP eCLIP10.72□□□□□ -0.693e-7■■□□□ 12.9
CAPRIN1-208ENST00000530008 KCNH2Q12809 1159 aa10.72□□□□□ -0.69
CAPRIN1-208ENST00000530008 NCOA4Q13772 614 aa10.72□□□□□ -0.69
CAPRIN1-208ENST00000530008 RNF135Q8IUD6 432 aa10.72□□□□□ -0.69
CAPRIN1-208ENST00000530008 PHTF2Q8N3S3 785 aa10.72□□□□□ -0.69
CAPRIN1-208ENST00000530008 OCSTAMPQ9BR26 566 aa10.72□□□□□ -0.69
CAPRIN1-208ENST00000530008 PCDHB9Q9Y5E1 797 aa10.72□□□□□ -0.69
CAPRIN1-208ENST00000530008 DXOO77932 396 aaKnown RBP10.71□□□□□ -0.69
CAPRIN1-208ENST00000530008 RASA1P20936 1047 aa10.71□□□□□ -0.69
CAPRIN1-208ENST00000530008 PTK7Q13308 1070 aa10.71□□□□□ -0.69
CAPRIN1-208ENST00000530008 NUDT12Q9BQG2 462 aa10.71□□□□□ -0.69
CAPRIN1-208ENST00000530008 E9PSI1 815 aa10.7□□□□□ -0.7
CAPRIN1-208ENST00000530008 ATP5J2-PTCD1G3V325 749 aa10.7□□□□□ -0.7
CAPRIN1-208ENST00000530008 LZTS3O60299 673 aaPredicted RBP10.7□□□□□ -0.7
CAPRIN1-208ENST00000530008 SSFA2P28290 1259 aa10.7□□□□□ -0.7
CAPRIN1-208ENST00000530008 NBPF14Q5TI25 921 aa10.7□□□□□ -0.7
CAPRIN1-208ENST00000530008 FAM160A2Q8N612 972 aaPredicted RBP10.7□□□□□ -0.7
CAPRIN1-208ENST00000530008 PLPP7Q8NBV4 271 aa10.7□□□□□ -0.7
CAPRIN1-208ENST00000530008 FAM200AQ8TCP9 573 aa10.7□□□□□ -0.7
CAPRIN1-208ENST00000530008 POTEB3A0JP26 581 aa10.69□□□□□ -0.7
CAPRIN1-208ENST00000530008 POTEBQ6S5H4 581 aa10.69□□□□□ -0.7
CAPRIN1-208ENST00000530008 STAC3Q96MF2 364 aa10.69□□□□□ -0.7
CAPRIN1-208ENST00000530008 HS3ST6Q96QI5 342 aa10.69□□□□□ -0.7
CAPRIN1-208ENST00000530008 SLAIN2Q9P270 581 aa10.69□□□□□ -0.7
CAPRIN1-208ENST00000530008 ARID4AP29374 1257 aaPredicted RBP10.68□□□□□ -0.7
CAPRIN1-208ENST00000530008 MMP16P51512 607 aa10.68□□□□□ -0.7
CAPRIN1-208ENST00000530008 FAM69CQ0P6D2 419 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms