RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 ADGRF5Q8IZF2 1346 aa5.35□□□□□ -1.55
PTPRC-213ENST00000529828 USP32Q8NFA0 1604 aa5.35□□□□□ -1.55
PTPRC-213ENST00000529828 PRAG1Q86YV5 1406 aa5.35□□□□□ -1.55
PTPRC-213ENST00000529828 TMEM132EQ6IEE7 984 aa5.35□□□□□ -1.55
PTPRC-213ENST00000529828 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.34□□□□□ -1.55
PTPRC-213ENST00000529828 RGL3Q3MIN7 710 aa5.34□□□□□ -1.55
PTPRC-213ENST00000529828 FAM182BQ5T319 152 aa5.34□□□□□ -1.55
PTPRC-213ENST00000529828 POTEGQ6S5H5 508 aa5.34□□□□□ -1.55
PTPRC-213ENST00000529828 KRT28Q7Z3Y7 464 aa5.34□□□□□ -1.55
PTPRC-213ENST00000529828 KRT27Q7Z3Y8 459 aa5.34□□□□□ -1.55
PTPRC-213ENST00000529828 LRPPRCP42704 1394 aaKnown RBP5.34□□□□□ -1.55
PTPRC-213ENST00000529828 HRCP23327 699 aa5.34□□□□□ -1.56
PTPRC-213ENST00000529828 VPS72Q15906 364 aa5.34□□□□□ -1.56
PTPRC-213ENST00000529828 FAM98CQ17RN3 349 aaKnown RBP5.34□□□□□ -1.56
PTPRC-213ENST00000529828 LRP5O75197 1615 aa5.34□□□□□ -1.56
PTPRC-213ENST00000529828 PPLO60437 1756 aa5.33□□□□□ -1.56
PTPRC-213ENST00000529828 CCDC144AA2RUR9 1427 aa5.33□□□□□ -1.56
PTPRC-213ENST00000529828 PLCH1Q4KWH8 1693 aa5.33□□□□□ -1.56
PTPRC-213ENST00000529828 EN1Q05925 392 aaPredicted RBP5.33□□□□□ -1.56
PTPRC-213ENST00000529828 SAFB2Q14151 953 aaKnown RBP eCLIP5.33□□□□□ -1.56
PTPRC-213ENST00000529828 R3HDM1Q15032 1099 aaKnown RBP5.33□□□□□ -1.56
PTPRC-213ENST00000529828 TNS3Q68CZ2 1445 aa5.33□□□□□ -1.56
PTPRC-213ENST00000529828 BAG6P46379 1132 aa5.32□□□□□ -1.56
PTPRC-213ENST00000529828 RPGRIP1LQ68CZ1 1315 aa5.32□□□□□ -1.56
PTPRC-213ENST00000529828 RRBP1Q9P2E9 1410 aaKnown RBP5.32□□□□□ -1.56
PTPRC-213ENST00000529828 FMN2Q9NZ56 1722 aa5.32□□□□□ -1.56
PTPRC-213ENST00000529828 OTUD5Q96G74 571 aa5.32□□□□□ -1.56
PTPRC-213ENST00000529828 PHF8Q9UPP1 1060 aa5.32□□□□□ -1.56
PTPRC-213ENST00000529828 FAM83GA6ND36 823 aa5.31□□□□□ -1.56
PTPRC-213ENST00000529828 TECPR2O15040 1411 aa5.31□□□□□ -1.56
PTPRC-213ENST00000529828 KIF1AQ12756 1690 aa5.31□□□□□ -1.56
PTPRC-213ENST00000529828 PMFBP1Q8TBY8 1022 aa5.31□□□□□ -1.56
PTPRC-213ENST00000529828 ABCA3Q99758 1704 aa5.31□□□□□ -1.56
PTPRC-213ENST00000529828 YTHDC2Q9H6S0 1430 aaKnown RBP5.31□□□□□ -1.56
PTPRC-213ENST00000529828 BTG4Q9NY30 223 aa5.31□□□□□ -1.56
PTPRC-213ENST00000529828 ABCC11Q96J66 1382 aa5.3□□□□□ -1.56
PTPRC-213ENST00000529828 ONECUT3O60422 494 aaPredicted RBP5.3□□□□□ -1.56
PTPRC-213ENST00000529828 PSME1Q06323 249 aa5.3□□□□□ -1.56
PTPRC-213ENST00000529828 EZH2Q15910 746 aaKnown RBP5.3□□□□□ -1.56
PTPRC-213ENST00000529828 RGPD8O14715 1765 aaPredicted RBP5.3□□□□□ -1.56
PTPRC-213ENST00000529828 KNDC1Q76NI1 1749 aa5.3□□□□□ -1.56
PTPRC-213ENST00000529828 IFT172Q9UG01 1749 aa5.3□□□□□ -1.56
PTPRC-213ENST00000529828 NRXN1Q9ULB1 1477 aa5.29□□□□□ -1.56
PTPRC-213ENST00000529828 PIK3C2GO75747 1445 aa5.29□□□□□ -1.56
PTPRC-213ENST00000529828 SPATA31E1Q6ZUB1 1445 aa5.29□□□□□ -1.56
PTPRC-213ENST00000529828 NRAPQ86VF7 1730 aa5.29□□□□□ -1.56
PTPRC-213ENST00000529828 NWD2Q9ULI1 1742 aa5.29□□□□□ -1.56
PTPRC-213ENST00000529828 ARHGEF10O15013 1369 aa5.29□□□□□ -1.56
PTPRC-213ENST00000529828 MKRN4PQ13434 485 aaPredicted RBP5.29□□□□□ -1.56
PTPRC-213ENST00000529828 PRAM1Q96QH2 718 aa5.29□□□□□ -1.56
PTPRC-213ENST00000529828 HIRIP3Q9BW71 556 aaPredicted RBP5.29□□□□□ -1.56
PTPRC-213ENST00000529828 SBNO1A3KN83 1393 aa5.29□□□□□ -1.56
PTPRC-213ENST00000529828 CFAP70Q5T0N1 1121 aa5.29□□□□□ -1.56
PTPRC-213ENST00000529828 ANKRD30BQ9BXX2 1392 aa5.28□□□□□ -1.56
PTPRC-213ENST00000529828 TRIM37O94972 964 aa5.28□□□□□ -1.56
PTPRC-213ENST00000529828 YY1P25490 414 aa5.28□□□□□ -1.56
PTPRC-213ENST00000529828 MAMSTRQ6ZN01 415 aa5.28□□□□□ -1.56
PTPRC-213ENST00000529828 RGPD1P0DJD0 1748 aa5.28□□□□□ -1.56
PTPRC-213ENST00000529828 TNS1Q9HBL0 1735 aaKnown RBP5.28□□□□□ -1.56
PTPRC-213ENST00000529828 SPATA31A5Q5VU36 1347 aa5.28□□□□□ -1.56
PTPRC-213ENST00000529828 SPATA31A7Q8IWB4 1347 aa5.28□□□□□ -1.56
PTPRC-213ENST00000529828 PAK3O75914 559 aaPredicted RBP5.28□□□□□ -1.56
PTPRC-213ENST00000529828 CHRNA2Q15822 529 aa5.28□□□□□ -1.56
PTPRC-213ENST00000529828 STRN4Q9NRL3 753 aa5.28□□□□□ -1.56
PTPRC-213ENST00000529828 POGKQ9P215 609 aa5.28□□□□□ -1.56
PTPRC-213ENST00000529828 GOLGB1Q14789 3259 aaKnown RBP5.28□□□□□ -1.56
PTPRC-213ENST00000529828 MINK1Q8N4C8 1332 aaPredicted RBP5.27□□□□□ -1.57
PTPRC-213ENST00000529828 PRDM11Q9NQV5 511 aa5.27□□□□□ -1.57
PTPRC-213ENST00000529828 USP35Q9P2H5 1018 aa5.27□□□□□ -1.57
PTPRC-213ENST00000529828 PRR36Q9H6K5 1346 aa5.27□□□□□ -1.57
PTPRC-213ENST00000529828 TRPM3Q9HCF6 1732 aaPredicted RBP5.27□□□□□ -1.57
PTPRC-213ENST00000529828 APBA3O96018 575 aa5.26□□□□□ -1.57
PTPRC-213ENST00000529828 NUTM2GQ5VZR2 741 aa5.26□□□□□ -1.57
PTPRC-213ENST00000529828 CAMKK2Q96RR4 588 aa5.26□□□□□ -1.57
PTPRC-213ENST00000529828 C14orf93Q9H972 538 aaKnown RBP5.26□□□□□ -1.57
PTPRC-213ENST00000529828 THSD7AQ9UPZ6 1657 aa5.26□□□□□ -1.57
PTPRC-213ENST00000529828 DHX57Q6P158 1386 aaKnown RBP5.26□□□□□ -1.57
PTPRC-213ENST00000529828 COL14A1Q05707 1796 aaKnown RBP5.26□□□□□ -1.57
PTPRC-213ENST00000529828 ACIN1Q9UKV3 1341 aaKnown RBP5.26□□□□□ -1.57
PTPRC-213ENST00000529828 DISP2A7MBM2 1401 aa5.26□□□□□ -1.57
PTPRC-213ENST00000529828 MPHOSPH9Q99550 1183 aa5.26□□□□□ -1.57
PTPRC-213ENST00000529828 TRAK1Q9UPV9 953 aa5.26□□□□□ -1.57
PTPRC-213ENST00000529828 GPRASP1Q5JY77 1395 aa5.26□□□□□ -1.57
PTPRC-213ENST00000529828 KIAA0232Q92628 1395 aa5.26□□□□□ -1.57
PTPRC-213ENST00000529828 ADGRB2O60241 1585 aa5.26□□□□□ -1.57
PTPRC-213ENST00000529828 ANKARQ7Z5J8 1434 aa5.25□□□□□ -1.57
PTPRC-213ENST00000529828 ZC3H6P61129 1189 aaKnown RBP5.25□□□□□ -1.57
PTPRC-213ENST00000529828 NGDNQ8NEJ9 315 aaKnown RBP5.25□□□□□ -1.57
PTPRC-213ENST00000529828 PPP1R1BQ9UD71 204 aaPredicted RBP5.25□□□□□ -1.57
PTPRC-213ENST00000529828 ALS2Q96Q42 1657 aa5.25□□□□□ -1.57
PTPRC-213ENST00000529828 SPATA31A1Q5TZJ5 1347 aa5.25□□□□□ -1.57
PTPRC-213ENST00000529828 SIRT1Q96EB6 747 aa5.25□□□□□ -1.57
PTPRC-213ENST00000529828 CEP350Q5VT06 3117 aa5.24□□□□□ -1.57
PTPRC-213ENST00000529828 FAM196AQ6ZSG2 479 aa5.24□□□□□ -1.57
PTPRC-213ENST00000529828 CRYBG1Q9Y4K1 1723 aa5.24□□□□□ -1.57
PTPRC-213ENST00000529828 TULP4Q9NRJ4 1543 aa5.24□□□□□ -1.57
PTPRC-213ENST00000529828 NUP188Q5SRE5 1749 aa5.23□□□□□ -1.57
PTPRC-213ENST00000529828 PDE3BQ13370 1112 aa5.23□□□□□ -1.57
PTPRC-213ENST00000529828 LARP1Q6PKG0 1096 aaKnown RBP5.23□□□□□ -1.57
PTPRC-213ENST00000529828 DLC1Q96QB1 1528 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms