RNA–Protein interactions for RNA: ENST00000529506.5

CMTM1-213, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-213ENST00000529506 NWD2Q9ULI1 1742 aa25.43■■□□□ 1.66
CMTM1-213ENST00000529506 ACEP12821 1306 aa25.43■■□□□ 1.66
CMTM1-213ENST00000529506 ALS2Q96Q42 1657 aa25.42■■□□□ 1.66
CMTM1-213ENST00000529506 ONECUT3O60422 494 aaPredicted RBP25.42■■□□□ 1.66
CMTM1-213ENST00000529506 POLR3AO14802 1390 aaPredicted RBP25.42■■□□□ 1.66
CMTM1-213ENST00000529506 BTG4Q9NY30 223 aa25.41■■□□□ 1.66
CMTM1-213ENST00000529506 SEPT12Q8IYM1 358 aa25.39■■□□□ 1.66
CMTM1-213ENST00000529506 ABCA3Q99758 1704 aa25.39■■□□□ 1.65
CMTM1-213ENST00000529506 PRDM11Q9NQV5 511 aa25.38■■□□□ 1.65
CMTM1-213ENST00000529506 GLI3P10071 1580 aa25.37■■□□□ 1.65
CMTM1-213ENST00000529506 PLCH1Q4KWH8 1693 aa25.36■■□□□ 1.65
CMTM1-213ENST00000529506 ABTB2Q8N961 1025 aa25.36■■□□□ 1.65
CMTM1-213ENST00000529506 CABP2Q9NPB3 220 aa25.36■■□□□ 1.65
CMTM1-213ENST00000529506 EVC2Q86UK5 1308 aa25.36■■□□□ 1.65
CMTM1-213ENST00000529506 BRD4O60885 1362 aaPredicted RBP25.35■■□□□ 1.65
CMTM1-213ENST00000529506 COL14A1Q05707 1796 aaKnown RBP25.35■■□□□ 1.65
CMTM1-213ENST00000529506 ROCK2O75116 1388 aaKnown RBP25.34■■□□□ 1.65
CMTM1-213ENST00000529506 NLRP13Q86W25 1043 aa25.33■■□□□ 1.65
CMTM1-213ENST00000529506 PPIP5K1Q6PFW1 1433 aa25.32■■□□□ 1.64
CMTM1-213ENST00000529506 A0A0G2JS52 829 aa25.32■■□□□ 1.64
CMTM1-213ENST00000529506 MYT1Q01538 1121 aa25.32■■□□□ 1.64
CMTM1-213ENST00000529506 KRT27Q7Z3Y8 459 aa25.32■■□□□ 1.64
CMTM1-213ENST00000529506 SF3B2Q13435 895 aaKnown RBP25.31■■□□□ 1.64
CMTM1-213ENST00000529506 NUTM2GQ5VZR2 741 aa25.31■■□□□ 1.64
CMTM1-213ENST00000529506 TOPAZ1Q8N9V7 1692 aa25.31■■□□□ 1.64
CMTM1-213ENST00000529506 ZC3H6P61129 1189 aaKnown RBP25.3■■□□□ 1.64
CMTM1-213ENST00000529506 CABP1Q9NZU7 370 aa25.3■■□□□ 1.64
CMTM1-213ENST00000529506 FAM98CQ17RN3 349 aaKnown RBP25.29■■□□□ 1.64
CMTM1-213ENST00000529506 TRPM1Q7Z4N2 1603 aa25.29■■□□□ 1.64
CMTM1-213ENST00000529506 KIAA0232Q92628 1395 aa25.29■■□□□ 1.64
CMTM1-213ENST00000529506 TRIM26Q12899 539 aaPredicted RBP25.28■■□□□ 1.64
CMTM1-213ENST00000529506 ZNF692Q9BU19 519 aaPredicted RBP25.28■■□□□ 1.64
CMTM1-213ENST00000529506 QRICH2Q9H0J4 1663 aa25.28■■□□□ 1.64
CMTM1-213ENST00000529506 SPATA31A5Q5VU36 1347 aa25.28■■□□□ 1.64
CMTM1-213ENST00000529506 SPATA31A7Q8IWB4 1347 aa25.28■■□□□ 1.64
CMTM1-213ENST00000529506 EVA1CP58658 441 aa25.27■■□□□ 1.64
CMTM1-213ENST00000529506 ZRANB1Q9UGI0 708 aa25.27■■□□□ 1.64
CMTM1-213ENST00000529506 BLMP54132 1417 aaPredicted RBP25.27■■□□□ 1.64
CMTM1-213ENST00000529506 BRWD3Q6RI45 1802 aa25.26■■□□□ 1.63
CMTM1-213ENST00000529506 CHRNA2Q15822 529 aa25.25■■□□□ 1.63
CMTM1-213ENST00000529506 CRYBG1Q9Y4K1 1723 aa25.25■■□□□ 1.63
CMTM1-213ENST00000529506 NRAPQ86VF7 1730 aa25.24■■□□□ 1.63
CMTM1-213ENST00000529506 TONSLQ96HA7 1378 aa25.23■■□□□ 1.63
CMTM1-213ENST00000529506 GCP02774 474 aa25.23■■□□□ 1.63
CMTM1-213ENST00000529506 CARD11Q9BXL7 1154 aa25.22■■□□□ 1.63
CMTM1-213ENST00000529506 STRN4Q9NRL3 753 aa25.22■■□□□ 1.63
CMTM1-213ENST00000529506 USP19O94966 1318 aa25.21■■□□□ 1.63
CMTM1-213ENST00000529506 NLRP6P59044 892 aa25.21■■□□□ 1.63
CMTM1-213ENST00000529506 CPDO75976 1380 aa25.2■■□□□ 1.63
CMTM1-213ENST00000529506 SPATA31A1Q5TZJ5 1347 aa25.2■■□□□ 1.62
CMTM1-213ENST00000529506 PHRF1Q9P1Y6 1649 aaKnown RBP25.19■■□□□ 1.62
CMTM1-213ENST00000529506 USP6P35125 1406 aa25.19■■□□□ 1.62
CMTM1-213ENST00000529506 EP400Q96L91 3159 aa25.16■■□□□ 1.62
CMTM1-213ENST00000529506 BARGINQ6ZT62 677 aa25.15■■□□□ 1.62
CMTM1-213ENST00000529506 SLC24A1O60721 1099 aa25.14■■□□□ 1.62
CMTM1-213ENST00000529506 BAG6P46379 1132 aa25.14■■□□□ 1.62
CMTM1-213ENST00000529506 SBNO2Q9Y2G9 1366 aa25.14■■□□□ 1.61
CMTM1-213ENST00000529506 KCNH5Q8NCM2 988 aa25.13■■□□□ 1.61
CMTM1-213ENST00000529506 USP35Q9P2H5 1018 aa25.13■■□□□ 1.61
CMTM1-213ENST00000529506 THRAP3Q9Y2W1 955 aaKnown RBP25.13■■□□□ 1.61
CMTM1-213ENST00000529506 TTC21AQ8NDW8 1320 aa25.12■■□□□ 1.61
CMTM1-213ENST00000529506 TCP11L2Q8N4U5 519 aa25.12■■□□□ 1.61
CMTM1-213ENST00000529506 SSH2Q76I76 1423 aa25.12■■□□□ 1.61
CMTM1-213ENST00000529506 TTC21BQ7Z4L5 1316 aa25.12■■□□□ 1.61
CMTM1-213ENST00000529506 PDE3BQ13370 1112 aa25.11■■□□□ 1.61
CMTM1-213ENST00000529506 DEFB132Q7Z7B7 95 aa25.11■■□□□ 1.61
CMTM1-213ENST00000529506 NRKQ7Z2Y5 1582 aa25.1■■□□□ 1.61
CMTM1-213ENST00000529506 LARP1Q6PKG0 1096 aaKnown RBP25.1■■□□□ 1.61
CMTM1-213ENST00000529506 FAM196AQ6ZSG2 479 aa25.1■■□□□ 1.61
CMTM1-213ENST00000529506 CAMTA1Q9Y6Y1 1673 aa25.1■■□□□ 1.61
CMTM1-213ENST00000529506 ZBTB7CA1YPR0 619 aa25.09■■□□□ 1.61
CMTM1-213ENST00000529506 PUS7Q96PZ0 661 aaKnown RBP25.09■■□□□ 1.61
CMTM1-213ENST00000529506 AATKQ6ZMQ8 1374 aa25.08■■□□□ 1.61
CMTM1-213ENST00000529506 KTN1Q86UP2 1357 aaKnown RBP25.08■■□□□ 1.61
CMTM1-213ENST00000529506 THSD7AQ9UPZ6 1657 aa25.07■■□□□ 1.6
CMTM1-213ENST00000529506 CPSF1Q10570 1443 aaKnown RBP25.06■■□□□ 1.6
CMTM1-213ENST00000529506 C11orf95C9JLR9 678 aaPredicted RBP25.06■■□□□ 1.6
CMTM1-213ENST00000529506 HDGFL2Q7Z4V5 671 aaPredicted RBP25.05■■□□□ 1.6
CMTM1-213ENST00000529506 TMC1Q8TDI8 760 aa25.05■■□□□ 1.6
CMTM1-213ENST00000529506 FAM182BQ5T319 152 aa25.04■■□□□ 1.6
CMTM1-213ENST00000529506 LMO7Q8WWI1 1683 aa25.04■■□□□ 1.6
CMTM1-213ENST00000529506 SLIT3O75094 1523 aa25.03■■□□□ 1.6
CMTM1-213ENST00000529506 TERF2IPQ9NYB0 399 aa25.03■■□□□ 1.6
CMTM1-213ENST00000529506 AKAP12Q02952 1782 aa25.03■■□□□ 1.6
CMTM1-213ENST00000529506 ARHGEF25Q86VW2 580 aa25.02■■□□□ 1.6
CMTM1-213ENST00000529506 CRB1P82279 1406 aa25.02■■□□□ 1.6
CMTM1-213ENST00000529506 TOM1L2Q6ZVM7 507 aa25.01■■□□□ 1.59
CMTM1-213ENST00000529506 COL5A2P05997 1499 aaPredicted RBP25.01■■□□□ 1.59
CMTM1-213ENST00000529506 PIK3C2AO00443 1686 aa24.99■■□□□ 1.59
CMTM1-213ENST00000529506 RGPD1P0DJD0 1748 aa24.99■■□□□ 1.59
CMTM1-213ENST00000529506 EN1Q05925 392 aaPredicted RBP24.99■■□□□ 1.59
CMTM1-213ENST00000529506 TRIM37O94972 964 aa24.98■■□□□ 1.59
CMTM1-213ENST00000529506 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.98■■□□□ 1.59
CMTM1-213ENST00000529506 CDCA7Q9BWT1 371 aaPredicted RBP24.98■■□□□ 1.59
CMTM1-213ENST00000529506 SLC12A5Q9H2X9 1139 aa24.98■■□□□ 1.59
CMTM1-213ENST00000529506 WDR17Q8IZU2 1322 aa24.96■■□□□ 1.59
CMTM1-213ENST00000529506 ST20-MTHFSA0A0A6YYL1 179 aa24.96■■□□□ 1.59
CMTM1-213ENST00000529506 SOX12O15370 315 aa24.96■■□□□ 1.59
CMTM1-213ENST00000529506 AXIN2Q9Y2T1 843 aa24.96■■□□□ 1.59
CMTM1-213ENST00000529506 USP31Q70CQ4 1352 aa24.95■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms