RNA–Protein interactions for RNA: ENST00000529199.1

CTSF-206, Transcript of cathepsin F, humanhuman

TSL 4

Gene CTSF, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-206ENST00000529199 HRCP23327 699 aa29.05■■■□□ 2.24
CTSF-206ENST00000529199 ABCA3Q99758 1704 aa29.04■■■□□ 2.24
CTSF-206ENST00000529199 NUDT16Q96DE0 195 aaKnown RBP29.04■■■□□ 2.24
CTSF-206ENST00000529199 PRDM11Q9NQV5 511 aa29.02■■■□□ 2.24
CTSF-206ENST00000529199 TRPM3Q9HCF6 1732 aaPredicted RBP29.01■■■□□ 2.23
CTSF-206ENST00000529199 CDK19Q9BWU1 502 aa29.01■■■□□ 2.23
CTSF-206ENST00000529199 FAM182BQ5T319 152 aa28.97■■■□□ 2.23
CTSF-206ENST00000529199 NUTM2GQ5VZR2 741 aa28.97■■■□□ 2.23
CTSF-206ENST00000529199 SPATA31A5Q5VU36 1347 aa28.96■■■□□ 2.23
CTSF-206ENST00000529199 SPATA31A7Q8IWB4 1347 aa28.96■■■□□ 2.23
CTSF-206ENST00000529199 ALS2Q96Q42 1657 aa28.96■■■□□ 2.23
CTSF-206ENST00000529199 BAG6P46379 1132 aa28.96■■■□□ 2.23
CTSF-206ENST00000529199 CHRNA2Q15822 529 aa28.95■■■□□ 2.22
CTSF-206ENST00000529199 COL14A1Q05707 1796 aaKnown RBP28.95■■■□□ 2.22
CTSF-206ENST00000529199 ZC3H6P61129 1189 aaKnown RBP28.94■■■□□ 2.22
CTSF-206ENST00000529199 STRN4Q9NRL3 753 aa28.93■■■□□ 2.22
CTSF-206ENST00000529199 NRAPQ86VF7 1730 aa28.92■■■□□ 2.22
CTSF-206ENST00000529199 KIAA0232Q92628 1395 aa28.92■■■□□ 2.22
CTSF-206ENST00000529199 ATP7BP35670 1465 aa28.91■■■□□ 2.22
CTSF-206ENST00000529199 NBPF8Q3BBV2 869 aa28.91■■■□□ 2.22
CTSF-206ENST00000529199 CCDC61Q9Y6R9 512 aa28.91■■■□□ 2.22
CTSF-206ENST00000529199 ACEP12821 1306 aa28.91■■■□□ 2.22
CTSF-206ENST00000529199 NBPF1Q3BBV0 1214 aa28.9■■■□□ 2.22
CTSF-206ENST00000529199 PSDA5PKW4 1024 aaPredicted RBP28.89■■■□□ 2.22
CTSF-206ENST00000529199 ARHGEF28Q8N1W1 1705 aaKnown RBP28.89■■■□□ 2.21
CTSF-206ENST00000529199 EN1Q05925 392 aaPredicted RBP28.88■■■□□ 2.21
CTSF-206ENST00000529199 EVA1CP58658 441 aa28.87■■■□□ 2.21
CTSF-206ENST00000529199 ABTB2Q8N961 1025 aa28.86■■■□□ 2.21
CTSF-206ENST00000529199 USP35Q9P2H5 1018 aa28.86■■■□□ 2.21
CTSF-206ENST00000529199 SPATA31A1Q5TZJ5 1347 aa28.86■■■□□ 2.21
CTSF-206ENST00000529199 PLEKHG3A1L390 1219 aa28.85■■■□□ 2.21
CTSF-206ENST00000529199 SRPK2P78362 688 aaKnown RBP28.84■■■□□ 2.21
CTSF-206ENST00000529199 POLR3AO14802 1390 aaPredicted RBP28.84■■■□□ 2.21
CTSF-206ENST00000529199 ITSN1Q15811 1721 aa28.83■■■□□ 2.21
CTSF-206ENST00000529199 CRYBG1Q9Y4K1 1723 aa28.81■■■□□ 2.2
CTSF-206ENST00000529199 CABP2Q9NPB3 220 aa28.8■■■□□ 2.2
CTSF-206ENST00000529199 TRIM37O94972 964 aa28.78■■■□□ 2.2
CTSF-206ENST00000529199 FAM196AQ6ZSG2 479 aa28.78■■■□□ 2.2
CTSF-206ENST00000529199 CENPJQ9HC77 1338 aaPredicted RBP28.77■■■□□ 2.2
CTSF-206ENST00000529199 LARP1Q6PKG0 1096 aaKnown RBP28.76■■■□□ 2.19
CTSF-206ENST00000529199 NLRP13Q86W25 1043 aa28.76■■■□□ 2.19
CTSF-206ENST00000529199 PDE3BQ13370 1112 aa28.75■■■□□ 2.19
CTSF-206ENST00000529199 R3HDM1Q15032 1099 aaKnown RBP28.75■■■□□ 2.19
CTSF-206ENST00000529199 EZH2Q15910 746 aaKnown RBP28.75■■■□□ 2.19
CTSF-206ENST00000529199 THSD7AQ9UPZ6 1657 aa28.74■■■□□ 2.19
CTSF-206ENST00000529199 PPIP5K1Q6PFW1 1433 aa28.74■■■□□ 2.19
CTSF-206ENST00000529199 PHRF1Q9P1Y6 1649 aaKnown RBP28.73■■■□□ 2.19
CTSF-206ENST00000529199 KIAA1210Q9ULL0 1709 aa28.72■■■□□ 2.19
CTSF-206ENST00000529199 SSH2Q76I76 1423 aa28.72■■■□□ 2.19
CTSF-206ENST00000529199 ZBTB7CA1YPR0 619 aa28.72■■■□□ 2.19
CTSF-206ENST00000529199 APBA3O96018 575 aa28.72■■■□□ 2.19
CTSF-206ENST00000529199 GCP02774 474 aa28.72■■■□□ 2.19
CTSF-206ENST00000529199 BARGINQ6ZT62 677 aa28.72■■■□□ 2.19
CTSF-206ENST00000529199 TCP11L2Q8N4U5 519 aa28.71■■■□□ 2.19
CTSF-206ENST00000529199 CABP1Q9NZU7 370 aa28.71■■■□□ 2.19
CTSF-206ENST00000529199 TOPAZ1Q8N9V7 1692 aa28.7■■■□□ 2.19
CTSF-206ENST00000529199 USP19O94966 1318 aa28.7■■■□□ 2.19
CTSF-206ENST00000529199 RGPD1P0DJD0 1748 aa28.7■■■□□ 2.19
CTSF-206ENST00000529199 CAMKK2Q96RR4 588 aa28.69■■■□□ 2.18
CTSF-206ENST00000529199 CAMTA1Q9Y6Y1 1673 aa28.68■■■□□ 2.18
CTSF-206ENST00000529199 CPDO75976 1380 aa28.68■■■□□ 2.18
CTSF-206ENST00000529199 NLRP6P59044 892 aa28.67■■■□□ 2.18
CTSF-206ENST00000529199 L3MBTL2Q969R5 705 aa28.67■■■□□ 2.18
CTSF-206ENST00000529199 DISP2A7MBM2 1401 aa28.66■■■□□ 2.18
CTSF-206ENST00000529199 NRKQ7Z2Y5 1582 aa28.65■■■□□ 2.18
CTSF-206ENST00000529199 LRP5O75197 1615 aa28.63■■■□□ 2.17
CTSF-206ENST00000529199 THRAP3Q9Y2W1 955 aaKnown RBP28.63■■■□□ 2.17
CTSF-206ENST00000529199 SIN3AQ96ST3 1273 aa28.62■■■□□ 2.17
CTSF-206ENST00000529199 BRD4O60885 1362 aaPredicted RBP28.61■■■□□ 2.17
CTSF-206ENST00000529199 NEUROD1Q13562 356 aa28.6■■■□□ 2.17
CTSF-206ENST00000529199 EVC2Q86UK5 1308 aa28.6■■■□□ 2.17
CTSF-206ENST00000529199 TNS1Q9HBL0 1735 aaKnown RBP28.6■■■□□ 2.17
CTSF-206ENST00000529199 USP6P35125 1406 aa28.58■■■□□ 2.17
CTSF-206ENST00000529199 COL5A2P05997 1499 aaPredicted RBP28.56■■■□□ 2.16
CTSF-206ENST00000529199 PARD3Q8TEW0 1356 aa28.56■■■□□ 2.16
CTSF-206ENST00000529199 LMO7Q8WWI1 1683 aa28.56■■■□□ 2.16
CTSF-206ENST00000529199 QRICH2Q9H0J4 1663 aa28.56■■■□□ 2.16
CTSF-206ENST00000529199 NBPF14Q5TI25 921 aa28.55■■■□□ 2.16
CTSF-206ENST00000529199 TOM1L2Q6ZVM7 507 aa28.55■■■□□ 2.16
CTSF-206ENST00000529199 CRB1P82279 1406 aa28.53■■■□□ 2.16
CTSF-206ENST00000529199 AATKQ6ZMQ8 1374 aa28.53■■■□□ 2.16
CTSF-206ENST00000529199 SOX12O15370 315 aa28.52■■■□□ 2.16
CTSF-206ENST00000529199 ROCK2O75116 1388 aaKnown RBP28.51■■■□□ 2.16
CTSF-206ENST00000529199 ZNF692Q9BU19 519 aaPredicted RBP28.51■■■□□ 2.15
CTSF-206ENST00000529199 AXIN2Q9Y2T1 843 aa28.5■■■□□ 2.15
CTSF-206ENST00000529199 C11orf95C9JLR9 678 aaPredicted RBP28.49■■■□□ 2.15
CTSF-206ENST00000529199 DDB1Q16531 1140 aa28.49■■■□□ 2.15
CTSF-206ENST00000529199 TTC21BQ7Z4L5 1316 aa28.48■■■□□ 2.15
CTSF-206ENST00000529199 CSB-PGBD3P0DP91 1061 aa28.46■■■□□ 2.15
CTSF-206ENST00000529199 KCNH5Q8NCM2 988 aa28.46■■■□□ 2.15
CTSF-206ENST00000529199 SLIT3O75094 1523 aa28.46■■■□□ 2.15
CTSF-206ENST00000529199 ARHGEF25Q86VW2 580 aa28.45■■■□□ 2.14
CTSF-206ENST00000529199 WDR17Q8IZU2 1322 aa28.43■■■□□ 2.14
CTSF-206ENST00000529199 OVOS2A0A0G2JMS6 1433 aa28.43■■■□□ 2.14
CTSF-206ENST00000529199 OVOS2A0A0J9YW53 1432 aa28.43■■■□□ 2.14
CTSF-206ENST00000529199 OVOS2Q6IE36 1432 aa28.43■■■□□ 2.14
CTSF-206ENST00000529199 PARP4Q9UKK3 1724 aaKnown RBP28.41■■■□□ 2.14
CTSF-206ENST00000529199 TRPM1Q7Z4N2 1603 aa28.41■■■□□ 2.14
CTSF-206ENST00000529199 TTC21AQ8NDW8 1320 aa28.41■■■□□ 2.14
CTSF-206ENST00000529199 KTN1Q86UP2 1357 aaKnown RBP28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms