RNA–Protein interactions for RNA: ENST00000528529.1

MRPL49-205, Transcript of mitochondrial ribosomal protein L49, humanhuman

TSL 3

Gene MRPL49, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL49-205ENST00000528529 PHRF1Q9P1Y6 1649 aaKnown RBP22.74■■□□□ 1.23
MRPL49-205ENST00000528529 QRICH2Q9H0J4 1663 aa22.71■■□□□ 1.23
MRPL49-205ENST00000528529 CCDC125Q86Z20 511 aa22.71■■□□□ 1.23
MRPL49-205ENST00000528529 SEPT12Q8IYM1 358 aa22.71■■□□□ 1.23
MRPL49-205ENST00000528529 CDK19Q9BWU1 502 aa22.71■■□□□ 1.23
MRPL49-205ENST00000528529 NBPF1Q3BBV0 1214 aa22.69■■□□□ 1.22
MRPL49-205ENST00000528529 BTG4Q9NY30 223 aa22.69■■□□□ 1.22
MRPL49-205ENST00000528529 BLMP54132 1417 aaPredicted RBP22.67■■□□□ 1.22
MRPL49-205ENST00000528529 A0A0G2JS52 829 aa22.67■■□□□ 1.22
MRPL49-205ENST00000528529 MYT1Q01538 1121 aa22.67■■□□□ 1.22
MRPL49-205ENST00000528529 POLR3AO14802 1390 aaPredicted RBP22.65■■□□□ 1.22
MRPL49-205ENST00000528529 PRDM11Q9NQV5 511 aa22.65■■□□□ 1.22
MRPL49-205ENST00000528529 ACEP12821 1306 aa22.64■■□□□ 1.22
MRPL49-205ENST00000528529 ONECUT3O60422 494 aaPredicted RBP22.64■■□□□ 1.21
MRPL49-205ENST00000528529 TRPM1Q7Z4N2 1603 aa22.64■■□□□ 1.21
MRPL49-205ENST00000528529 FAM98CQ17RN3 349 aaKnown RBP22.63■■□□□ 1.21
MRPL49-205ENST00000528529 KRT27Q7Z3Y8 459 aa22.63■■□□□ 1.21
MRPL49-205ENST00000528529 ZRANB1Q9UGI0 708 aa22.63■■□□□ 1.21
MRPL49-205ENST00000528529 CCDC61Q9Y6R9 512 aa22.63■■□□□ 1.21
MRPL49-205ENST00000528529 CENPJQ9HC77 1338 aaPredicted RBP22.62■■□□□ 1.21
MRPL49-205ENST00000528529 KIAA0232Q92628 1395 aa22.62■■□□□ 1.21
MRPL49-205ENST00000528529 SRPK2P78362 688 aaKnown RBP22.61■■□□□ 1.21
MRPL49-205ENST00000528529 SF3B2Q13435 895 aaKnown RBP22.61■■□□□ 1.21
MRPL49-205ENST00000528529 NUTM2GQ5VZR2 741 aa22.61■■□□□ 1.21
MRPL49-205ENST00000528529 NRKQ7Z2Y5 1582 aa22.61■■□□□ 1.21
MRPL49-205ENST00000528529 PPIP5K1Q6PFW1 1433 aa22.6■■□□□ 1.21
MRPL49-205ENST00000528529 NBPF8Q3BBV2 869 aa22.6■■□□□ 1.21
MRPL49-205ENST00000528529 THSD7AQ9UPZ6 1657 aa22.6■■□□□ 1.21
MRPL49-205ENST00000528529 PLEKHG3A1L390 1219 aa22.59■■□□□ 1.21
MRPL49-205ENST00000528529 L3MBTL2Q969R5 705 aa22.59■■□□□ 1.21
MRPL49-205ENST00000528529 RGPD1P0DJD0 1748 aa22.59■■□□□ 1.21
MRPL49-205ENST00000528529 SPATA31A5Q5VU36 1347 aa22.58■■□□□ 1.21
MRPL49-205ENST00000528529 SPATA31A7Q8IWB4 1347 aa22.58■■□□□ 1.21
MRPL49-205ENST00000528529 CHRNA2Q15822 529 aa22.57■■□□□ 1.2
MRPL49-205ENST00000528529 DEFB132Q7Z7B7 95 aa22.57■■□□□ 1.2
MRPL49-205ENST00000528529 ZC3H6P61129 1189 aaKnown RBP22.56■■□□□ 1.2
MRPL49-205ENST00000528529 SIN3AQ96ST3 1273 aa22.56■■□□□ 1.2
MRPL49-205ENST00000528529 CABP2Q9NPB3 220 aa22.56■■□□□ 1.2
MRPL49-205ENST00000528529 ABTB2Q8N961 1025 aa22.55■■□□□ 1.2
MRPL49-205ENST00000528529 STRN4Q9NRL3 753 aa22.54■■□□□ 1.2
MRPL49-205ENST00000528529 LMO7Q8WWI1 1683 aa22.53■■□□□ 1.2
MRPL49-205ENST00000528529 NEUROD1Q13562 356 aa22.53■■□□□ 1.2
MRPL49-205ENST00000528529 TNS1Q9HBL0 1735 aaKnown RBP22.52■■□□□ 1.2
MRPL49-205ENST00000528529 SRCAPQ6ZRS2 3230 aa22.52■■□□□ 1.2
MRPL49-205ENST00000528529 SPATA31A1Q5TZJ5 1347 aa22.51■■□□□ 1.19
MRPL49-205ENST00000528529 ROCK2O75116 1388 aaKnown RBP22.5■■□□□ 1.19
MRPL49-205ENST00000528529 USP19O94966 1318 aa22.5■■□□□ 1.19
MRPL49-205ENST00000528529 AKAP12Q02952 1782 aa22.5■■□□□ 1.19
MRPL49-205ENST00000528529 SSH2Q76I76 1423 aa22.49■■□□□ 1.19
MRPL49-205ENST00000528529 CAMTA1Q9Y6Y1 1673 aa22.49■■□□□ 1.19
MRPL49-205ENST00000528529 FAM182BQ5T319 152 aa22.49■■□□□ 1.19
MRPL49-205ENST00000528529 PIK3C2AO00443 1686 aa22.49■■□□□ 1.19
MRPL49-205ENST00000528529 USP6P35125 1406 aa22.48■■□□□ 1.19
MRPL49-205ENST00000528529 BAG6P46379 1132 aa22.48■■□□□ 1.19
MRPL49-205ENST00000528529 EVA1CP58658 441 aa22.48■■□□□ 1.19
MRPL49-205ENST00000528529 NLRP13Q86W25 1043 aa22.48■■□□□ 1.19
MRPL49-205ENST00000528529 EVC2Q86UK5 1308 aa22.48■■□□□ 1.19
MRPL49-205ENST00000528529 BRD4O60885 1362 aaPredicted RBP22.48■■□□□ 1.19
MRPL49-205ENST00000528529 CPDO75976 1380 aa22.48■■□□□ 1.19
MRPL49-205ENST00000528529 CABP1Q9NZU7 370 aa22.47■■□□□ 1.19
MRPL49-205ENST00000528529 USP35Q9P2H5 1018 aa22.47■■□□□ 1.19
MRPL49-205ENST00000528529 SLIT3O75094 1523 aa22.44■■□□□ 1.18
MRPL49-205ENST00000528529 GCP02774 474 aa22.44■■□□□ 1.18
MRPL49-205ENST00000528529 LARP1Q6PKG0 1096 aaKnown RBP22.42■■□□□ 1.18
MRPL49-205ENST00000528529 PARP4Q9UKK3 1724 aaKnown RBP22.42■■□□□ 1.18
MRPL49-205ENST00000528529 COL5A2P05997 1499 aaPredicted RBP22.41■■□□□ 1.18
MRPL49-205ENST00000528529 ZBTB7CA1YPR0 619 aa22.41■■□□□ 1.18
MRPL49-205ENST00000528529 NLRP6P59044 892 aa22.41■■□□□ 1.18
MRPL49-205ENST00000528529 RGPD5Q99666 1765 aa22.4■■□□□ 1.18
MRPL49-205ENST00000528529 BARGINQ6ZT62 677 aa22.4■■□□□ 1.18
MRPL49-205ENST00000528529 MON2Q7Z3U7 1717 aa22.4■■□□□ 1.18
MRPL49-205ENST00000528529 WNK3Q9BYP7 1800 aa22.39■■□□□ 1.17
MRPL49-205ENST00000528529 EN1Q05925 392 aaPredicted RBP22.39■■□□□ 1.17
MRPL49-205ENST00000528529 COL18A1P39060 1754 aa22.39■■□□□ 1.17
MRPL49-205ENST00000528529 LRP5O75197 1615 aa22.39■■□□□ 1.17
MRPL49-205ENST00000528529 FAM196AQ6ZSG2 479 aa22.38■■□□□ 1.17
MRPL49-205ENST00000528529 TCP11L2Q8N4U5 519 aa22.38■■□□□ 1.17
MRPL49-205ENST00000528529 DISP2A7MBM2 1401 aa22.38■■□□□ 1.17
MRPL49-205ENST00000528529 PDE3BQ13370 1112 aa22.37■■□□□ 1.17
MRPL49-205ENST00000528529 PSDA5PKW4 1024 aaPredicted RBP22.36■■□□□ 1.17
MRPL49-205ENST00000528529 CRB1P82279 1406 aa22.36■■□□□ 1.17
MRPL49-205ENST00000528529 TRIM37O94972 964 aa22.35■■□□□ 1.17
MRPL49-205ENST00000528529 AATKQ6ZMQ8 1374 aa22.35■■□□□ 1.17
MRPL49-205ENST00000528529 ZNF692Q9BU19 519 aaPredicted RBP22.34■■□□□ 1.17
MRPL49-205ENST00000528529 THRAP3Q9Y2W1 955 aaKnown RBP22.34■■□□□ 1.17
MRPL49-205ENST00000528529 LRRC37A3O60309 1634 aa22.34■■□□□ 1.17
MRPL49-205ENST00000528529 TTC21BQ7Z4L5 1316 aa22.33■■□□□ 1.17
MRPL49-205ENST00000528529 RREB1Q92766 1687 aa22.33■■□□□ 1.17
MRPL49-205ENST00000528529 TONSLQ96HA7 1378 aa22.33■■□□□ 1.17
MRPL49-205ENST00000528529 CARD11Q9BXL7 1154 aa22.32■■□□□ 1.16
MRPL49-205ENST00000528529 KTN1Q86UP2 1357 aaKnown RBP22.32■■□□□ 1.16
MRPL49-205ENST00000528529 SBNO2Q9Y2G9 1366 aa22.32■■□□□ 1.16
MRPL49-205ENST00000528529 CPSF1Q10570 1443 aaKnown RBP22.31■■□□□ 1.16
MRPL49-205ENST00000528529 SBF2Q86WG5 1849 aa22.31■■□□□ 1.16
MRPL49-205ENST00000528529 EZH2Q15910 746 aaKnown RBP22.31■■□□□ 1.16
MRPL49-205ENST00000528529 TTC21AQ8NDW8 1320 aa22.31■■□□□ 1.16
MRPL49-205ENST00000528529 SOX12O15370 315 aa22.3■■□□□ 1.16
MRPL49-205ENST00000528529 NUP188Q5SRE5 1749 aa22.3■■□□□ 1.16
MRPL49-205ENST00000528529 APBA3O96018 575 aa22.29■■□□□ 1.16
MRPL49-205ENST00000528529 TOM1L2Q6ZVM7 507 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms