RNA–Protein interactions for RNA: ENST00000528246.5

MSRA-210, Transcript of methionine sulfoxide reductase A, humanhuman

TSL 1 (best) BASIC

Gene MSRA, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-210ENST00000528246 MTHFSP49914 203 aa13.09□□□□□ -0.31
MSRA-210ENST00000528246 HDAC1Q13547 482 aaPredicted RBP13.09□□□□□ -0.31
MSRA-210ENST00000528246 MVPQ14764 893 aaKnown RBP13.09□□□□□ -0.31
MSRA-210ENST00000528246 PANK1Q8TE04 598 aa13.09□□□□□ -0.31
MSRA-210ENST00000528246 PNNQ9H307 717 aaKnown RBP13.09□□□□□ -0.31
MSRA-210ENST00000528246 COL3A1P02461 1466 aaPredicted RBP13.08□□□□□ -0.31
MSRA-210ENST00000528246 ATAD2Q6PL18 1390 aa13.08□□□□□ -0.31
MSRA-210ENST00000528246 ZKSCAN2Q63HK3 967 aa13.08□□□□□ -0.32
MSRA-210ENST00000528246 FRAT1Q92837 279 aaPredicted RBP13.08□□□□□ -0.32
MSRA-210ENST00000528246 ZNF428Q96B54 188 aa13.08□□□□□ -0.32
MSRA-210ENST00000528246 SLC12A5Q9H2X9 1139 aa13.08□□□□□ -0.32
MSRA-210ENST00000528246 ANTXR1Q9H6X2 564 aa13.07□□□□□ -0.32
MSRA-210ENST00000528246 TRAK1Q9UPV9 953 aa13.07□□□□□ -0.32
MSRA-210ENST00000528246 SLC4A3P48751 1232 aa13.06□□□□□ -0.32
MSRA-210ENST00000528246 SLC52A1Q9NWF4 448 aa13.06□□□□□ -0.32
MSRA-210ENST00000528246 PCDHB15Q9Y5E8 787 aa13.06□□□□□ -0.32
MSRA-210ENST00000528246 PNPLA6Q8IY17 1366 aa13.06□□□□□ -0.32
MSRA-210ENST00000528246 FRAT2O75474 233 aaPredicted RBP13.05□□□□□ -0.32
MSRA-210ENST00000528246 BRPF1P55201 1214 aaPredicted RBP13.05□□□□□ -0.32
MSRA-210ENST00000528246 DZIP1LQ8IYY4 767 aaKnown RBP13.05□□□□□ -0.32
MSRA-210ENST00000528246 IL27Q8NEV9 243 aa13.05□□□□□ -0.32
MSRA-210ENST00000528246 DDX19BQ9UMR2 479 aa13.05□□□□□ -0.32
MSRA-210ENST00000528246 PPIP5K1Q6PFW1 1433 aa13.05□□□□□ -0.32
MSRA-210ENST00000528246 PLEKHF1Q96S99 279 aa13.05□□□□□ -0.32
MSRA-210ENST00000528246 PDZRN3Q9UPQ7 1066 aa13.05□□□□□ -0.32
MSRA-210ENST00000528246 RLBP1P12271 317 aa13.04□□□□□ -0.32
MSRA-210ENST00000528246 L1TD1Q5T7N2 865 aaKnown RBP13.04□□□□□ -0.32
MSRA-210ENST00000528246 CHMP4BQ9H444 224 aaKnown RBP13.04□□□□□ -0.32
MSRA-210ENST00000528246 KIF16BQ96L93 1317 aa13.03□□□□□ -0.32
MSRA-210ENST00000528246 ALDH1L2Q3SY69 923 aa13.02□□□□□ -0.32
MSRA-210ENST00000528246 SMC5Q8IY18 1101 aa13.02□□□□□ -0.32
MSRA-210ENST00000528246 PPP6R1Q9UPN7 881 aa13.02□□□□□ -0.32
MSRA-210ENST00000528246 IPO8O15397 1037 aaKnown RBP13.02□□□□□ -0.33
MSRA-210ENST00000528246 SEC24BO95487 1268 aa13.02□□□□□ -0.33
MSRA-210ENST00000528246 FTSJ3Q8IY81 847 aaKnown RBP13.02□□□□□ -0.33
MSRA-210ENST00000528246 FAM43AQ8N2R8 423 aa13.02□□□□□ -0.33
MSRA-210ENST00000528246 TERF2IPQ9NYB0 399 aa13.02□□□□□ -0.33
MSRA-210ENST00000528246 A0A1W2PP64 1363 aa13.02□□□□□ -0.33
MSRA-210ENST00000528246 EIF5BO60841 1220 aaKnown RBP13.01□□□□□ -0.33
MSRA-210ENST00000528246 U2AF1L5P0DN76 240 aaPredicted RBP13.01□□□□□ -0.33
MSRA-210ENST00000528246 TMPOP42166 694 aaKnown RBP13.01□□□□□ -0.33
MSRA-210ENST00000528246 U2AF1Q01081 240 aaKnown RBP eCLIP13.01□□□□□ -0.33
MSRA-210ENST00000528246 DLC1Q96QB1 1528 aa13.01□□□□□ -0.33
MSRA-210ENST00000528246 TMEM131LA2VDJ0 1609 aa13.01□□□□□ -0.33
MSRA-210ENST00000528246 ATF7IPQ6VMQ6 1270 aa13□□□□□ -0.33
MSRA-210ENST00000528246 ISY1Q9ULR0 285 aaKnown RBP13□□□□□ -0.33
MSRA-210ENST00000528246 MED1Q15648 1581 aaPredicted RBP13□□□□□ -0.33
MSRA-210ENST00000528246 RRP7AQ9Y3A4 280 aaKnown RBP12.99□□□□□ -0.33
MSRA-210ENST00000528246 CD163L1Q9NR16 1453 aa12.99□□□□□ -0.33
MSRA-210ENST00000528246 UBAP1LF5GYI3 381 aa12.99□□□□□ -0.33
MSRA-210ENST00000528246 CHGAP10645 457 aaKnown RBP12.99□□□□□ -0.33
MSRA-210ENST00000528246 TBC1D2Q9BYX2 928 aa12.99□□□□□ -0.33
MSRA-210ENST00000528246 KIF20BQ96Q89 1820 aa12.98□□□□□ -0.33
MSRA-210ENST00000528246 ZNF335Q9H4Z2 1342 aaPredicted RBP12.98□□□□□ -0.33
MSRA-210ENST00000528246 NCKAP5LQ9HCH0 1330 aa12.98□□□□□ -0.33
MSRA-210ENST00000528246 NEUROD2Q15784 382 aa12.98□□□□□ -0.33
MSRA-210ENST00000528246 FBXO31Q5XUX0 539 aaPredicted RBP12.98□□□□□ -0.33
MSRA-210ENST00000528246 TMEM132EQ6IEE7 984 aa12.98□□□□□ -0.33
MSRA-210ENST00000528246 TRIM35Q9UPQ4 493 aa12.98□□□□□ -0.33
MSRA-210ENST00000528246 ATP7BP35670 1465 aa12.98□□□□□ -0.33
MSRA-210ENST00000528246 NCOA3Q9Y6Q9 1424 aa12.98□□□□□ -0.33
MSRA-210ENST00000528246 PIK3R4Q99570 1358 aa12.97□□□□□ -0.33
MSRA-210ENST00000528246 CEP170BQ9Y4F5 1589 aaPredicted RBP12.97□□□□□ -0.33
MSRA-210ENST00000528246 FCHSD2O94868 740 aa12.97□□□□□ -0.33
MSRA-210ENST00000528246 TRIM27P14373 513 aa12.97□□□□□ -0.33
MSRA-210ENST00000528246 CALD1Q05682 793 aaKnown RBP12.97□□□□□ -0.33
MSRA-210ENST00000528246 ARHGAP45Q92619 1136 aa12.97□□□□□ -0.33
MSRA-210ENST00000528246 BRPF3Q9ULD4 1205 aa12.97□□□□□ -0.33
MSRA-210ENST00000528246 RBM25P49756 843 aaKnown RBP12.96□□□□□ -0.33
MSRA-210ENST00000528246 SNX21Q969T3 373 aa12.96□□□□□ -0.33
MSRA-210ENST00000528246 SMC4Q9NTJ3 1288 aa12.96□□□□□ -0.33
MSRA-210ENST00000528246 ZBTB40Q9NUA8 1239 aa12.96□□□□□ -0.33
MSRA-210ENST00000528246 CHMP5Q9NZZ3 219 aa12.96□□□□□ -0.33
MSRA-210ENST00000528246 ZNF142P52746 1687 aaPredicted RBP12.96□□□□□ -0.33
MSRA-210ENST00000528246 YTHDC2Q9H6S0 1430 aaKnown RBP12.96□□□□□ -0.33
MSRA-210ENST00000528246 C22orf23Q9BZE7 217 aa12.96□□□□□ -0.34
MSRA-210ENST00000528246 PTMSP20962 102 aa12.95□□□□□ -0.34
MSRA-210ENST00000528246 TNNT2P45379 298 aaPredicted RBP12.95□□□□□ -0.34
MSRA-210ENST00000528246 SSH1Q8WYL5 1049 aa12.95□□□□□ -0.34
MSRA-210ENST00000528246 CFAP44Q96MT7 982 aa12.95□□□□□ -0.34
MSRA-210ENST00000528246 CIZ1Q9ULV3 898 aaPredicted RBP12.95□□□□□ -0.34
MSRA-210ENST00000528246 FAM135BQ49AJ0 1406 aa12.95□□□□□ -0.34
MSRA-210ENST00000528246 FYB1O15117 783 aa12.94□□□□□ -0.34
MSRA-210ENST00000528246 DIAPH1O60610 1272 aaKnown RBP12.94□□□□□ -0.34
MSRA-210ENST00000528246 EXOSC9Q06265 439 aaKnown RBP12.94□□□□□ -0.34
MSRA-210ENST00000528246 HDGFL2Q7Z4V5 671 aaPredicted RBP12.94□□□□□ -0.34
MSRA-210ENST00000528246 KIF24Q5T7B8 1368 aa12.94□□□□□ -0.34
MSRA-210ENST00000528246 TNRQ92752 1358 aa12.94□□□□□ -0.34
MSRA-210ENST00000528246 PTCH1Q13635 1447 aa12.94□□□□□ -0.34
MSRA-210ENST00000528246 NUCB1Q02818 461 aa12.93□□□□□ -0.34
MSRA-210ENST00000528246 FSD2A1L4K1 749 aa12.93□□□□□ -0.34
MSRA-210ENST00000528246 MCM4P33991 863 aa12.93□□□□□ -0.34
MSRA-210ENST00000528246 IDI1Q13907 227 aa12.93□□□□□ -0.34
MSRA-210ENST00000528246 GCC1Q96CN9 775 aa12.93□□□□□ -0.34
MSRA-210ENST00000528246 CABP2Q9NPB3 220 aa12.93□□□□□ -0.34
MSRA-210ENST00000528246 TNNQ9UQP3 1299 aa12.93□□□□□ -0.34
MSRA-210ENST00000528246 ALKQ9UM73 1620 aa12.93□□□□□ -0.34
MSRA-210ENST00000528246 A2ML1A8K2U0 1454 aa12.93□□□□□ -0.34
MSRA-210ENST00000528246 CFAP65Q6ZU64 1925 aaKnown RBP12.92□□□□□ -0.34
MSRA-210ENST00000528246 DDX11L8A8MPP1 907 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms