RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 SBNO2Q9Y2G9 1366 aa17.2■□□□□ 0.34
TRAPPC4-209ENST00000528230 PAK3O75914 559 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC4-209ENST00000528230 CABLES1Q8TDN4 633 aa17.2■□□□□ 0.34
TRAPPC4-209ENST00000528230 PPIP5K1Q6PFW1 1433 aa17.2■□□□□ 0.34
TRAPPC4-209ENST00000528230 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.18■□□□□ 0.34
TRAPPC4-209ENST00000528230 BCL9LQ86UU0 1499 aa17.18■□□□□ 0.34
TRAPPC4-209ENST00000528230 BRD4O60885 1362 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC4-209ENST00000528230 SLIT2O94813 1529 aa17.18■□□□□ 0.34
TRAPPC4-209ENST00000528230 ATRNO75882 1429 aa17.17■□□□□ 0.34
TRAPPC4-209ENST00000528230 CABP1Q9NZU7 370 aa17.17■□□□□ 0.34
TRAPPC4-209ENST00000528230 NWD2Q9ULI1 1742 aa17.16■□□□□ 0.34
TRAPPC4-209ENST00000528230 CRYBG1Q9Y4K1 1723 aa17.16■□□□□ 0.34
TRAPPC4-209ENST00000528230 UNC5CLQ8IV45 518 aa17.16■□□□□ 0.34
TRAPPC4-209ENST00000528230 ATAD2Q6PL18 1390 aa17.15■□□□□ 0.34
TRAPPC4-209ENST00000528230 SLC24A1O60721 1099 aa17.14■□□□□ 0.33
TRAPPC4-209ENST00000528230 PLEKHG5O94827 1062 aa17.14■□□□□ 0.33
TRAPPC4-209ENST00000528230 ZNF692Q9BU19 519 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC4-209ENST00000528230 FAM83GA6ND36 823 aa17.13■□□□□ 0.33
TRAPPC4-209ENST00000528230 PUS7Q96PZ0 661 aaKnown RBP17.13■□□□□ 0.33
TRAPPC4-209ENST00000528230 PLCH1Q4KWH8 1693 aa17.13■□□□□ 0.33
TRAPPC4-209ENST00000528230 ABTB2Q8N961 1025 aa17.12■□□□□ 0.33
TRAPPC4-209ENST00000528230 GJD4Q96KN9 370 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC4-209ENST00000528230 USP6P35125 1406 aa17.12■□□□□ 0.33
TRAPPC4-209ENST00000528230 AKAP12Q02952 1782 aa17.11■□□□□ 0.33
TRAPPC4-209ENST00000528230 COL14A1Q05707 1796 aaKnown RBP17.11■□□□□ 0.33
TRAPPC4-209ENST00000528230 NLRP13Q86W25 1043 aa17.1■□□□□ 0.33
TRAPPC4-209ENST00000528230 RGS12O14924 1447 aa17.1■□□□□ 0.33
TRAPPC4-209ENST00000528230 PHRF1Q9P1Y6 1649 aaKnown RBP17.1■□□□□ 0.33
TRAPPC4-209ENST00000528230 ST20-MTHFSA0A0A6YYL1 179 aa17.09■□□□□ 0.33
TRAPPC4-209ENST00000528230 VPS72Q15906 364 aa17.09■□□□□ 0.33
TRAPPC4-209ENST00000528230 SSH2Q76I76 1423 aa17.09■□□□□ 0.33
TRAPPC4-209ENST00000528230 CPSF1Q10570 1443 aaKnown RBP17.08■□□□□ 0.32
TRAPPC4-209ENST00000528230 NUTM2GQ5VZR2 741 aa17.08■□□□□ 0.32
TRAPPC4-209ENST00000528230 CCER1Q8TC90 406 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC4-209ENST00000528230 TESK2Q96S53 571 aa17.08■□□□□ 0.32
TRAPPC4-209ENST00000528230 USP19O94966 1318 aa17.07■□□□□ 0.32
TRAPPC4-209ENST00000528230 PRDM11Q9NQV5 511 aa17.07■□□□□ 0.32
TRAPPC4-209ENST00000528230 BTG4Q9NY30 223 aa17.07■□□□□ 0.32
TRAPPC4-209ENST00000528230 NRAPQ86VF7 1730 aa17.07■□□□□ 0.32
TRAPPC4-209ENST00000528230 MSH5O43196 834 aa17.06■□□□□ 0.32
TRAPPC4-209ENST00000528230 PIAS4Q8N2W9 510 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC4-209ENST00000528230 GLI3P10071 1580 aa17.06■□□□□ 0.32
TRAPPC4-209ENST00000528230 KIAA0232Q92628 1395 aa17.05■□□□□ 0.32
TRAPPC4-209ENST00000528230 TTC21AQ8NDW8 1320 aa17.05■□□□□ 0.32
TRAPPC4-209ENST00000528230 CPDO75976 1380 aa17.04■□□□□ 0.32
TRAPPC4-209ENST00000528230 TTC21BQ7Z4L5 1316 aa17.04■□□□□ 0.32
TRAPPC4-209ENST00000528230 ONECUT3O60422 494 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC4-209ENST00000528230 GCP02774 474 aa17.04■□□□□ 0.32
TRAPPC4-209ENST00000528230 NLRP6P59044 892 aa17.04■□□□□ 0.32
TRAPPC4-209ENST00000528230 ZC3H6P61129 1189 aaKnown RBP17.04■□□□□ 0.32
TRAPPC4-209ENST00000528230 UPF1Q92900 1129 aaKnown RBP eCLIP17.04■□□□□ 0.32
TRAPPC4-209ENST00000528230 MON2Q7Z3U7 1717 aa17.04■□□□□ 0.32
TRAPPC4-209ENST00000528230 KTN1Q86UP2 1357 aaKnown RBP17.03■□□□□ 0.32
TRAPPC4-209ENST00000528230 USP47Q96K76 1375 aa17.03■□□□□ 0.32
TRAPPC4-209ENST00000528230 NRKQ7Z2Y5 1582 aa17.03■□□□□ 0.32
TRAPPC4-209ENST00000528230 PIK3C2AO00443 1686 aa17.03■□□□□ 0.32
TRAPPC4-209ENST00000528230 TMC1Q8TDI8 760 aa17.02■□□□□ 0.32
TRAPPC4-209ENST00000528230 SLC12A5Q9H2X9 1139 aa17.02■□□□□ 0.32
TRAPPC4-209ENST00000528230 CCDC9Q9Y3X0 531 aaKnown RBP17.02■□□□□ 0.32
TRAPPC4-209ENST00000528230 NINLQ9Y2I6 1382 aa17.02■□□□□ 0.31
TRAPPC4-209ENST00000528230 CD163L1Q9NR16 1453 aa17.01■□□□□ 0.31
TRAPPC4-209ENST00000528230 HDGFL2Q7Z4V5 671 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC4-209ENST00000528230 TERF2IPQ9NYB0 399 aa17.01■□□□□ 0.31
TRAPPC4-209ENST00000528230 SLIT3O75094 1523 aa17.01■□□□□ 0.31
TRAPPC4-209ENST00000528230 TMF1P82094 1093 aa17■□□□□ 0.31
TRAPPC4-209ENST00000528230 CHRNA2Q15822 529 aa17■□□□□ 0.31
TRAPPC4-209ENST00000528230 KCNH5Q8NCM2 988 aa16.99■□□□□ 0.31
TRAPPC4-209ENST00000528230 SPATA31A5Q5VU36 1347 aa16.98■□□□□ 0.31
TRAPPC4-209ENST00000528230 SPATA31A7Q8IWB4 1347 aa16.98■□□□□ 0.31
TRAPPC4-209ENST00000528230 BRWD3Q6RI45 1802 aa16.98■□□□□ 0.31
TRAPPC4-209ENST00000528230 LMO7Q8WWI1 1683 aa16.98■□□□□ 0.31
TRAPPC4-209ENST00000528230 CDCA8Q53HL2 280 aa16.98■□□□□ 0.31
TRAPPC4-209ENST00000528230 SEPT12Q8IYM1 358 aa16.98■□□□□ 0.31
TRAPPC4-209ENST00000528230 EVA1CP58658 441 aa16.97■□□□□ 0.31
TRAPPC4-209ENST00000528230 USP31Q70CQ4 1352 aa16.97■□□□□ 0.31
TRAPPC4-209ENST00000528230 USP54Q70EL1 1684 aa16.97■□□□□ 0.31
TRAPPC4-209ENST00000528230 CAMTA1Q9Y6Y1 1673 aa16.97■□□□□ 0.31
TRAPPC4-209ENST00000528230 EDC4Q6P2E9 1401 aaKnown RBP16.96■□□□□ 0.31
TRAPPC4-209ENST00000528230 AATKQ6ZMQ8 1374 aa16.96■□□□□ 0.31
TRAPPC4-209ENST00000528230 A0A1W2PP64 1363 aa16.95■□□□□ 0.3
TRAPPC4-209ENST00000528230 ADRA2BP18089 450 aa16.95■□□□□ 0.3
TRAPPC4-209ENST00000528230 STRN4Q9NRL3 753 aa16.95■□□□□ 0.3
TRAPPC4-209ENST00000528230 SPATA31A1Q5TZJ5 1347 aa16.95■□□□□ 0.3
TRAPPC4-209ENST00000528230 FAM98CQ17RN3 349 aaKnown RBP16.94■□□□□ 0.3
TRAPPC4-209ENST00000528230 CCDC125Q86Z20 511 aa16.94■□□□□ 0.3
TRAPPC4-209ENST00000528230 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.94■□□□□ 0.3
TRAPPC4-209ENST00000528230 COL18A1P39060 1754 aa16.94■□□□□ 0.3
TRAPPC4-209ENST00000528230 ARHGEF25Q86VW2 580 aa16.93■□□□□ 0.3
TRAPPC4-209ENST00000528230 KRT27Q7Z3Y8 459 aa16.92■□□□□ 0.3
TRAPPC4-209ENST00000528230 NME9Q86XW9 330 aa16.92■□□□□ 0.3
TRAPPC4-209ENST00000528230 ANKRD36BQ8N2N9 1353 aa16.91■□□□□ 0.3
TRAPPC4-209ENST00000528230 BARGINQ6ZT62 677 aa16.91■□□□□ 0.3
TRAPPC4-209ENST00000528230 COL5A2P05997 1499 aaPredicted RBP16.91■□□□□ 0.3
TRAPPC4-209ENST00000528230 THSD7AQ9UPZ6 1657 aa16.91■□□□□ 0.3
TRAPPC4-209ENST00000528230 NFAT5O94916 1531 aa16.91■□□□□ 0.3
TRAPPC4-209ENST00000528230 EIF4G2P78344 907 aaKnown RBP eCLIP16.9■□□□□ 0.3
TRAPPC4-209ENST00000528230 LARP1Q6PKG0 1096 aaKnown RBP16.9■□□□□ 0.3
TRAPPC4-209ENST00000528230 ZRANB1Q9UGI0 708 aa16.9■□□□□ 0.3
TRAPPC4-209ENST00000528230 THRAP3Q9Y2W1 955 aaKnown RBP16.9■□□□□ 0.3
TRAPPC4-209ENST00000528230 A0A0G2JS52 829 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms