RNA–Protein interactions for RNA: ENST00000527951.5

PDZD3-208, Transcript of PDZ domain containing 3, humanhuman

TSL 4

Gene PDZD3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-208ENST00000527951 SPATA31A5Q5VU36 1347 aa25.39■■□□□ 1.66
PDZD3-208ENST00000527951 SPATA31A7Q8IWB4 1347 aa25.39■■□□□ 1.66
PDZD3-208ENST00000527951 A0A0G2JS52 829 aa25.39■■□□□ 1.66
PDZD3-208ENST00000527951 MYT1Q01538 1121 aa25.39■■□□□ 1.66
PDZD3-208ENST00000527951 PHRF1Q9P1Y6 1649 aaKnown RBP25.38■■□□□ 1.65
PDZD3-208ENST00000527951 ITSN1Q15811 1721 aa25.38■■□□□ 1.65
PDZD3-208ENST00000527951 GPRASP1Q5JY77 1395 aa25.37■■□□□ 1.65
PDZD3-208ENST00000527951 EN1Q05925 392 aaPredicted RBP25.37■■□□□ 1.65
PDZD3-208ENST00000527951 FAM182BQ5T319 152 aa25.37■■□□□ 1.65
PDZD3-208ENST00000527951 HIRIP3Q9BW71 556 aaPredicted RBP25.37■■□□□ 1.65
PDZD3-208ENST00000527951 EIF3AQ14152 1382 aaKnown RBP25.36■■□□□ 1.65
PDZD3-208ENST00000527951 ARHGEF28Q8N1W1 1705 aaKnown RBP25.36■■□□□ 1.65
PDZD3-208ENST00000527951 TRAK1Q9UPV9 953 aa25.34■■□□□ 1.65
PDZD3-208ENST00000527951 MINK1Q8N4C8 1332 aaPredicted RBP25.34■■□□□ 1.65
PDZD3-208ENST00000527951 ATP7BP35670 1465 aa25.33■■□□□ 1.65
PDZD3-208ENST00000527951 WASLO00401 505 aaPredicted RBP25.31■■□□□ 1.64
PDZD3-208ENST00000527951 RREB1Q92766 1687 aa25.3■■□□□ 1.64
PDZD3-208ENST00000527951 TOPAZ1Q8N9V7 1692 aa25.29■■□□□ 1.64
PDZD3-208ENST00000527951 R3HDM1Q15032 1099 aaKnown RBP25.29■■□□□ 1.64
PDZD3-208ENST00000527951 PRDM11Q9NQV5 511 aa25.29■■□□□ 1.64
PDZD3-208ENST00000527951 SPATA31A1Q5TZJ5 1347 aa25.28■■□□□ 1.64
PDZD3-208ENST00000527951 KIAA0232Q92628 1395 aa25.28■■□□□ 1.64
PDZD3-208ENST00000527951 NUP188Q5SRE5 1749 aa25.26■■□□□ 1.63
PDZD3-208ENST00000527951 EZH2Q15910 746 aaKnown RBP25.26■■□□□ 1.63
PDZD3-208ENST00000527951 NGDNQ8NEJ9 315 aaKnown RBP25.26■■□□□ 1.63
PDZD3-208ENST00000527951 CAMKK2Q96RR4 588 aa25.25■■□□□ 1.63
PDZD3-208ENST00000527951 NRKQ7Z2Y5 1582 aa25.24■■□□□ 1.63
PDZD3-208ENST00000527951 RAB3GAP2Q9H2M9 1393 aa25.24■■□□□ 1.63
PDZD3-208ENST00000527951 PAK3O75914 559 aaPredicted RBP25.23■■□□□ 1.63
PDZD3-208ENST00000527951 LMO7Q8WWI1 1683 aa25.23■■□□□ 1.63
PDZD3-208ENST00000527951 CHRNA2Q15822 529 aa25.22■■□□□ 1.63
PDZD3-208ENST00000527951 PARD3Q8TEW0 1356 aa25.2■■□□□ 1.63
PDZD3-208ENST00000527951 TRIM37O94972 964 aa25.2■■□□□ 1.62
PDZD3-208ENST00000527951 FAM196AQ6ZSG2 479 aa25.2■■□□□ 1.62
PDZD3-208ENST00000527951 POLR3AO14802 1390 aaPredicted RBP25.19■■□□□ 1.62
PDZD3-208ENST00000527951 NUDT16Q96DE0 195 aaKnown RBP25.19■■□□□ 1.62
PDZD3-208ENST00000527951 KDM2AQ9Y2K7 1162 aa25.19■■□□□ 1.62
PDZD3-208ENST00000527951 CAMTA1Q9Y6Y1 1673 aa25.19■■□□□ 1.62
PDZD3-208ENST00000527951 SSH2Q76I76 1423 aa25.19■■□□□ 1.62
PDZD3-208ENST00000527951 DCAF11Q8TEB1 546 aa25.18■■□□□ 1.62
PDZD3-208ENST00000527951 STRN4Q9NRL3 753 aa25.17■■□□□ 1.62
PDZD3-208ENST00000527951 PARP4Q9UKK3 1724 aaKnown RBP25.16■■□□□ 1.62
PDZD3-208ENST00000527951 ZC3H6P61129 1189 aaKnown RBP25.15■■□□□ 1.62
PDZD3-208ENST00000527951 BARGINQ6ZT62 677 aa25.15■■□□□ 1.62
PDZD3-208ENST00000527951 NUTM2GQ5VZR2 741 aa25.14■■□□□ 1.62
PDZD3-208ENST00000527951 KIAA1210Q9ULL0 1709 aa25.13■■□□□ 1.61
PDZD3-208ENST00000527951 STAC3Q96MF2 364 aa25.13■■□□□ 1.61
PDZD3-208ENST00000527951 APBA3O96018 575 aa25.12■■□□□ 1.61
PDZD3-208ENST00000527951 CPDO75976 1380 aa25.12■■□□□ 1.61
PDZD3-208ENST00000527951 USP35Q9P2H5 1018 aa25.11■■□□□ 1.61
PDZD3-208ENST00000527951 PEAK1Q9H792 1746 aa25.11■■□□□ 1.61
PDZD3-208ENST00000527951 USP19O94966 1318 aa25.11■■□□□ 1.61
PDZD3-208ENST00000527951 ACEP12821 1306 aa25.11■■□□□ 1.61
PDZD3-208ENST00000527951 SBF2Q86WG5 1849 aa25.1■■□□□ 1.61
PDZD3-208ENST00000527951 LARP1Q6PKG0 1096 aaKnown RBP25.1■■□□□ 1.61
PDZD3-208ENST00000527951 CDK19Q9BWU1 502 aa25.1■■□□□ 1.61
PDZD3-208ENST00000527951 RGPD3A6NKT7 1758 aaPredicted RBP25.09■■□□□ 1.61
PDZD3-208ENST00000527951 RGPD4Q7Z3J3 1758 aa25.09■■□□□ 1.61
PDZD3-208ENST00000527951 NBPF8Q3BBV2 869 aa25.09■■□□□ 1.61
PDZD3-208ENST00000527951 PLEKHG3A1L390 1219 aa25.08■■□□□ 1.61
PDZD3-208ENST00000527951 CCDC61Q9Y6R9 512 aa25.07■■□□□ 1.6
PDZD3-208ENST00000527951 COL5A2P05997 1499 aaPredicted RBP25.07■■□□□ 1.6
PDZD3-208ENST00000527951 PDE3BQ13370 1112 aa25.06■■□□□ 1.6
PDZD3-208ENST00000527951 TCP11L2Q8N4U5 519 aa25.06■■□□□ 1.6
PDZD3-208ENST00000527951 EVA1CP58658 441 aa25.05■■□□□ 1.6
PDZD3-208ENST00000527951 LRRC37A3O60309 1634 aa25.04■■□□□ 1.6
PDZD3-208ENST00000527951 WNK3Q9BYP7 1800 aa25.04■■□□□ 1.6
PDZD3-208ENST00000527951 ABTB2Q8N961 1025 aa25.03■■□□□ 1.6
PDZD3-208ENST00000527951 CASZ1Q86V15 1759 aa25.01■■□□□ 1.59
PDZD3-208ENST00000527951 THRAP3Q9Y2W1 955 aaKnown RBP25.01■■□□□ 1.59
PDZD3-208ENST00000527951 COL18A1P39060 1754 aa25■■□□□ 1.59
PDZD3-208ENST00000527951 SLIT3O75094 1523 aa24.99■■□□□ 1.59
PDZD3-208ENST00000527951 CRB1P82279 1406 aa24.98■■□□□ 1.59
PDZD3-208ENST00000527951 PPIP5K1Q6PFW1 1433 aa24.98■■□□□ 1.59
PDZD3-208ENST00000527951 GCP02774 474 aa24.98■■□□□ 1.59
PDZD3-208ENST00000527951 NBPF14Q5TI25 921 aa24.98■■□□□ 1.59
PDZD3-208ENST00000527951 QRICH2Q9H0J4 1663 aa24.97■■□□□ 1.59
PDZD3-208ENST00000527951 OVOS2A0A0G2JMS6 1433 aa24.96■■□□□ 1.59
PDZD3-208ENST00000527951 OVOS2A0A0J9YW53 1432 aa24.96■■□□□ 1.59
PDZD3-208ENST00000527951 OVOS2Q6IE36 1432 aa24.96■■□□□ 1.59
PDZD3-208ENST00000527951 PIK3C2AO00443 1686 aa24.96■■□□□ 1.59
PDZD3-208ENST00000527951 NLRP13Q86W25 1043 aa24.95■■□□□ 1.58
PDZD3-208ENST00000527951 NINLQ9Y2I6 1382 aa24.94■■□□□ 1.58
PDZD3-208ENST00000527951 YY1P25490 414 aa24.94■■□□□ 1.58
PDZD3-208ENST00000527951 NBPF1Q3BBV0 1214 aa24.94■■□□□ 1.58
PDZD3-208ENST00000527951 AKAP12Q02952 1782 aa24.94■■□□□ 1.58
PDZD3-208ENST00000527951 BRD4O60885 1362 aaPredicted RBP24.93■■□□□ 1.58
PDZD3-208ENST00000527951 SPON1Q9HCB6 807 aa24.93■■□□□ 1.58
PDZD3-208ENST00000527951 USP6P35125 1406 aa24.93■■□□□ 1.58
PDZD3-208ENST00000527951 RGPD5Q99666 1765 aa24.93■■□□□ 1.58
PDZD3-208ENST00000527951 KCNQ2O43526 872 aa24.92■■□□□ 1.58
PDZD3-208ENST00000527951 AATKQ6ZMQ8 1374 aa24.92■■□□□ 1.58
PDZD3-208ENST00000527951 C11orf95C9JLR9 678 aaPredicted RBP24.91■■□□□ 1.58
PDZD3-208ENST00000527951 ANO8Q9HCE9 1232 aaPredicted RBP24.9■■□□□ 1.58
PDZD3-208ENST00000527951 TRIM26Q12899 539 aaPredicted RBP24.89■■□□□ 1.58
PDZD3-208ENST00000527951 PTF1AQ7RTS3 328 aa24.89■■□□□ 1.58
PDZD3-208ENST00000527951 CABP2Q9NPB3 220 aa24.89■■□□□ 1.58
PDZD3-208ENST00000527951 PLSCR1O15162 318 aa24.88■■□□□ 1.57
PDZD3-208ENST00000527951 SRPK2P78362 688 aaKnown RBP24.88■■□□□ 1.57
PDZD3-208ENST00000527951 CENPJQ9HC77 1338 aaPredicted RBP24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms