RNA–Protein interactions for RNA: ENST00000527840.1

SOX6-209, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-209ENST00000527840 LORP23490 312 aaPredicted RBP8.79□□□□□ -1
SOX6-209ENST00000527840 AMHR2Q16671 573 aa8.79□□□□□ -1
SOX6-209ENST00000527840 MRPL14Q6P1L8 145 aaKnown RBP8.79□□□□□ -1
SOX6-209ENST00000527840 NDUFV2P19404 249 aa8.78□□□□□ -1
SOX6-209ENST00000527840 TTLL12Q14166 644 aaPredicted RBP8.78□□□□□ -1
SOX6-209ENST00000527840 TIMP2P16035 220 aa8.77□□□□□ -1.01
SOX6-209ENST00000527840 SCARF1Q14162 830 aa8.77□□□□□ -1.01
SOX6-209ENST00000527840 DIXDC1Q155Q3 683 aa8.77□□□□□ -1.01
SOX6-209ENST00000527840 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.77□□□□□ -1.01
SOX6-209ENST00000527840 FAM174AQ8TBP5 190 aa8.77□□□□□ -1.01
SOX6-209ENST00000527840 ERBB4Q15303 1308 aa8.76□□□□□ -1.01
SOX6-209ENST00000527840 VSIG8P0DPA2 414 aa8.75□□□□□ -1.01
SOX6-209ENST00000527840 VEGFBP49765 207 aa8.75□□□□□ -1.01
SOX6-209ENST00000527840 WDR4P57081 412 aaKnown RBP8.75□□□□□ -1.01
SOX6-209ENST00000527840 GIGYF2Q6Y7W6 1299 aaKnown RBP8.75□□□□□ -1.01
SOX6-209ENST00000527840 LYPD8Q6UX82 237 aa8.74□□□□□ -1.01
SOX6-209ENST00000527840 BARGINQ6ZT62 677 aa8.74□□□□□ -1.01
SOX6-209ENST00000527840 CDK15Q96Q40 435 aa8.74□□□□□ -1.01
SOX6-209ENST00000527840 RSBN1LQ6PCB5 846 aaPredicted RBP8.73□□□□□ -1.01
SOX6-209ENST00000527840 PURBQ96QR8 312 aaKnown RBP8.73□□□□□ -1.01
SOX6-209ENST00000527840 KLF16Q9BXK1 252 aaPredicted RBP8.73□□□□□ -1.01
SOX6-209ENST00000527840 CTHP32929 405 aa8.72□□□□□ -1.01
SOX6-209ENST00000527840 BEGAINQ9BUH8 593 aa8.72□□□□□ -1.01
SOX6-209ENST00000527840 ZMYND10O75800 440 aa8.71□□□□□ -1.02
SOX6-209ENST00000527840 F12P00748 615 aaPredicted RBP8.71□□□□□ -1.02
SOX6-209ENST00000527840 NR5A1Q13285 461 aa8.7□□□□□ -1.02
SOX6-209ENST00000527840 PRPF38BQ5VTL8 546 aaKnown RBP8.7□□□□□ -1.02
SOX6-209ENST00000527840 TBC1D2Q9BYX2 928 aa8.7□□□□□ -1.02
SOX6-209ENST00000527840 ZBTB3Q9H5J0 574 aa8.7□□□□□ -1.02
SOX6-209ENST00000527840 SPTLC1O15269 473 aa8.69□□□□□ -1.02
SOX6-209ENST00000527840 CFAP99D6REC4 459 aa8.68□□□□□ -1.02
SOX6-209ENST00000527840 ZIC2O95409 532 aaPredicted RBP8.68□□□□□ -1.02
SOX6-209ENST00000527840 FOXJ1Q92949 421 aa8.68□□□□□ -1.02
SOX6-209ENST00000527840 HRCP23327 699 aa8.67□□□□□ -1.02
SOX6-209ENST00000527840 BPHLQ86WA6 291 aaPredicted RBP8.67□□□□□ -1.02
SOX6-209ENST00000527840 MAP10Q9P2G4 905 aa8.67□□□□□ -1.02
SOX6-209ENST00000527840 ITPKCQ96DU7 683 aa8.66□□□□□ -1.02
SOX6-209ENST00000527840 ZFAND3Q9H8U3 227 aa8.66□□□□□ -1.02
SOX6-209ENST00000527840 PCDHB15Q9Y5E8 787 aa8.66□□□□□ -1.02
SOX6-209ENST00000527840 SOBPA7XYQ1 873 aa8.65□□□□□ -1.02
SOX6-209ENST00000527840 MAN1A2O60476 641 aa8.65□□□□□ -1.02
SOX6-209ENST00000527840 UPP2O95045 317 aa8.65□□□□□ -1.02
SOX6-209ENST00000527840 ARID5BQ14865 1188 aa8.65□□□□□ -1.02
SOX6-209ENST00000527840 PARP9Q8IXQ6 854 aa8.65□□□□□ -1.02
SOX6-209ENST00000527840 ARMC2Q8NEN0 867 aa8.65□□□□□ -1.02
SOX6-209ENST00000527840 NR3C2P08235 984 aa8.64□□□□□ -1.03
SOX6-209ENST00000527840 AGERQ15109 404 aa8.64□□□□□ -1.03
SOX6-209ENST00000527840 LINC00528Q8N1L1 170 aa8.64□□□□□ -1.03
SOX6-209ENST00000527840 MEIOBQ8N635 442 aa8.64□□□□□ -1.03
SOX6-209ENST00000527840 ZC3H15Q8WU90 426 aaKnown RBP8.64□□□□□ -1.03
SOX6-209ENST00000527840 MAP4K5Q9Y4K4 846 aa8.64□□□□□ -1.03
SOX6-209ENST00000527840 GRM5P41594 1212 aa8.63□□□□□ -1.03
SOX6-209ENST00000527840 C4orf48Q5BLP8 95 aa8.63□□□□□ -1.03
SOX6-209ENST00000527840 C1QTNF2Q9BXJ5 285 aa8.63□□□□□ -1.03
SOX6-209ENST00000527840 TUSC1Q2TAM9 212 aa8.62□□□□□ -1.03
SOX6-209ENST00000527840 C6orf118Q5T5N4 469 aa8.62□□□□□ -1.03
SOX6-209ENST00000527840 NBPF14Q5TI25 921 aa8.62□□□□□ -1.03
SOX6-209ENST00000527840 RIC3Q7Z5B4 369 aa8.62□□□□□ -1.03
SOX6-209ENST00000527840 PPFIA3O75145 1194 aa8.61□□□□□ -1.03
SOX6-209ENST00000527840 BMP2P12643 396 aa8.61□□□□□ -1.03
SOX6-209ENST00000527840 SH3RF1Q7Z6J0 888 aa8.61□□□□□ -1.03
SOX6-209ENST00000527840 TRMT44Q8IYL2 757 aaKnown RBP8.61□□□□□ -1.03
SOX6-209ENST00000527840 CABLES1Q8TDN4 633 aa8.6□□□□□ -1.03
SOX6-209ENST00000527840 SOS2Q07890 1332 aaPredicted RBP8.59□□□□□ -1.03
SOX6-209ENST00000527840 PER1O15534 1290 aaPredicted RBP8.59□□□□□ -1.03
SOX6-209ENST00000527840 FSHRP23945 695 aa8.59□□□□□ -1.03
SOX6-209ENST00000527840 TRIM66O15016 1216 aa8.58□□□□□ -1.04
SOX6-209ENST00000527840 TSEN34Q9BSV6 310 aaKnown RBP8.58□□□□□ -1.04
SOX6-209ENST00000527840 EMILIN1Q9Y6C2 1016 aa8.58□□□□□ -1.04
SOX6-209ENST00000527840 KCNMA1Q12791 1236 aa8.57□□□□□ -1.04
SOX6-209ENST00000527840 SH3BP5LQ7L8J4 393 aa8.57□□□□□ -1.04
SOX6-209ENST00000527840 HELBQ8NG08 1087 aaPredicted RBP8.57□□□□□ -1.04
SOX6-209ENST00000527840 GPKOWQ92917 476 aaPredicted RBP eCLIP8.57□□□□□ -1.04
SOX6-209ENST00000527840 DNMT3LQ9UJW3 386 aa8.57□□□□□ -1.04
SOX6-209ENST00000527840 LOC100996750A0A140TA64 210 aa8.56□□□□□ -1.04
SOX6-209ENST00000527840 CSPP1Q1MSJ5 1256 aa8.56□□□□□ -1.04
SOX6-209ENST00000527840 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.56□□□□□ -1.04
SOX6-209ENST00000527840 VASH1Q7L8A9 365 aaPredicted RBP8.56□□□□□ -1.04
SOX6-209ENST00000527840 CCDC116Q8IYX3 515 aa8.56□□□□□ -1.04
SOX6-209ENST00000527840 TSC1Q92574 1164 aa8.56□□□□□ -1.04
SOX6-209ENST00000527840 AK7Q96M32 723 aa8.56□□□□□ -1.04
SOX6-209ENST00000527840 KRTAP4-6Q9BYQ5 205 aa8.56□□□□□ -1.04
SOX6-209ENST00000527840 LILRB3O75022 631 aa8.55□□□□□ -1.04
SOX6-209ENST00000527840 MYSM1Q5VVJ2 828 aa8.55□□□□□ -1.04
SOX6-209ENST00000527840 LIMD1Q9UGP4 676 aa8.55□□□□□ -1.04
SOX6-209ENST00000527840 NUTM2BA6NNL0 878 aaPredicted RBP8.54□□□□□ -1.04
SOX6-209ENST00000527840 NUTM2EB1AL46 878 aaPredicted RBP8.54□□□□□ -1.04
SOX6-209ENST00000527840 RNF225M0QZC1 329 aaPredicted RBP8.54□□□□□ -1.04
SOX6-209ENST00000527840 QPCTQ16769 361 aa8.54□□□□□ -1.04
SOX6-209ENST00000527840 NUTM2DQ5VT03 806 aaPredicted RBP8.54□□□□□ -1.04
SOX6-209ENST00000527840 NUTM2AQ8IVF1 878 aaPredicted RBP8.54□□□□□ -1.04
SOX6-209ENST00000527840 TTLL8A6PVC2 850 aa8.52□□□□□ -1.05
SOX6-209ENST00000527840 MAGEB6P1A0A0J9YX57 407 aa8.51□□□□□ -1.05
SOX6-209ENST00000527840 NANOS1Q8WY41 292 aaKnown RBP8.51□□□□□ -1.05
SOX6-209ENST00000527840 PGPEP1Q9NXJ5 209 aa8.51□□□□□ -1.05
SOX6-209ENST00000527840 CDV3Q9UKY7 258 aaKnown RBP8.51□□□□□ -1.05
SOX6-209ENST00000527840 GSK3AP49840 483 aa8.5□□□□□ -1.05
SOX6-209ENST00000527840 PTSQ03393 145 aa8.5□□□□□ -1.05
SOX6-209ENST00000527840 ERFEQ4G0M1 354 aa8.5□□□□□ -1.05
SOX6-209ENST00000527840 Q6ZVU0 165 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms